data_5AVI # _model_server_result.job_id tD3jqQYgs3FYBxR80FjEFQ _model_server_result.datetime_utc '2024-10-19 16:31:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5avi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 5AVI # _exptl.entry_id 5AVI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 423.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'tert-butyl 2-[[4-[ethanoyl(methyl)amino]phenoxy]methyl]-5-(trifluoromethyl)benzoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5AVI _cell.length_a 124.356 _cell.length_b 124.356 _cell.length_c 91.916 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C22 H24 F3 N O4' _chem_comp.formula_weight 423.425 _chem_comp.id 4KM _chem_comp.mon_nstd_flag . _chem_comp.name 'tert-butyl 2-[[4-[ethanoyl(methyl)amino]phenoxy]methyl]-5-(trifluoromethyl)benzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C10 4KM sing 1 n n C13 C10 4KM sing 2 n n C10 O9 4KM sing 3 n n C10 C11 4KM sing 4 n n O9 C7 4KM sing 5 n n C20 C21 4KM doub 6 n y C20 C19 4KM sing 7 n y C21 C16 4KM sing 8 n y C26 C24 4KM sing 9 n n O25 C24 4KM doub 10 n n C24 N22 4KM sing 11 n n C14 C4 4KM sing 12 n n C14 O15 4KM sing 13 n n C7 C5 4KM sing 14 n n C7 O8 4KM doub 15 n n N22 C19 4KM sing 16 n n N22 C23 4KM sing 17 n n C4 C5 4KM doub 18 n y C4 C3 4KM sing 19 n y C5 C6 4KM sing 20 n y C19 C18 4KM doub 21 n y C3 C2 4KM doub 22 n y C6 C1 4KM doub 23 n y F28 C27 4KM sing 24 n n C16 O15 4KM sing 25 n n C16 C17 4KM doub 26 n y C2 C1 4KM sing 27 n y C1 C27 4KM sing 28 n n F30 C27 4KM sing 29 n n C27 F29 4KM sing 30 n n C18 C17 4KM sing 31 n y C2 H1 4KM sing 32 n n C3 H2 4KM sing 33 n n C18 H3 4KM sing 34 n n C20 H4 4KM sing 35 n n C17 H5 4KM sing 36 n n C21 H6 4KM sing 37 n n C6 H7 4KM sing 38 n n C26 H8 4KM sing 39 n n C26 H9 4KM sing 40 n n C26 H10 4KM sing 41 n n C11 H11 4KM sing 42 n n C11 H12 4KM sing 43 n n C11 H13 4KM sing 44 n n C12 H14 4KM sing 45 n n C12 H15 4KM sing 46 n n C12 H16 4KM sing 47 n n C13 H17 4KM sing 48 n n C13 H18 4KM sing 49 n n C13 H19 4KM sing 50 n n C23 H20 4KM sing 51 n n C23 H21 4KM sing 52 n n C23 H22 4KM sing 53 n n C14 H23 4KM sing 54 n n C14 H24 4KM sing 55 n n # _atom_sites.entry_id 5AVI _atom_sites.fract_transf_matrix[1][1] 0.008041 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010879 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 4KM A 1 501 1 4KM UNL . F 3 4KM C 1 501 1 4KM UNL . G 4 HOH A 1 601 38 HOH HOH . G 4 HOH A 2 602 65 HOH HOH . G 4 HOH A 3 603 76 HOH HOH . G 4 HOH A 4 604 55 HOH HOH . G 4 HOH A 5 605 54 HOH HOH . G 4 HOH A 6 606 77 HOH HOH . G 4 HOH A 7 607 37 HOH HOH . G 4 HOH A 8 608 33 HOH HOH . G 4 HOH A 9 609 59 HOH HOH . G 4 HOH A 10 610 16 HOH HOH . G 4 HOH A 11 611 10 HOH HOH . G 4 HOH A 12 612 57 HOH HOH . G 4 HOH A 13 613 48 HOH HOH . G 4 HOH A 14 614 62 HOH HOH . G 4 HOH A 15 615 42 HOH HOH . G 4 HOH A 16 616 51 HOH HOH . G 4 HOH A 17 617 32 HOH HOH . G 4 HOH A 18 618 49 HOH HOH . G 4 HOH A 19 619 31 HOH HOH . G 4 HOH A 20 620 66 HOH HOH . G 4 HOH A 21 621 9 HOH HOH . G 4 HOH A 22 622 52 HOH HOH . G 4 HOH A 23 623 25 HOH HOH . G 4 HOH A 24 624 36 HOH HOH . G 4 HOH A 25 625 79 HOH HOH . G 4 HOH A 26 626 4 HOH HOH . G 4 HOH A 27 627 12 HOH HOH . G 4 HOH A 28 628 68 HOH HOH . G 4 HOH A 29 629 21 HOH HOH . G 4 HOH A 30 630 2 HOH HOH . G 4 HOH A 31 631 71 HOH HOH . G 4 HOH A 32 632 20 HOH HOH . H 4 HOH B 1 801 8 HOH HOH . H 4 HOH B 2 802 41 HOH HOH . H 4 HOH B 3 803 26 HOH HOH . H 4 HOH B 4 804 43 HOH HOH . I 4 HOH C 1 601 56 HOH HOH . I 4 HOH C 2 602 81 HOH HOH . I 4 HOH C 3 603 27 HOH HOH . I 4 HOH C 4 604 72 HOH HOH . I 4 HOH C 5 605 18 HOH HOH . I 4 HOH C 6 606 28 HOH HOH . I 4 HOH C 7 607 50 HOH HOH . I 4 HOH C 8 608 47 HOH HOH . I 4 HOH C 9 609 11 HOH HOH . I 4 HOH C 10 610 44 HOH HOH . I 4 HOH C 11 611 14 HOH HOH . I 4 HOH C 12 612 13 HOH HOH . I 4 HOH C 13 613 83 HOH HOH . I 4 HOH C 14 614 6 HOH HOH . I 4 HOH C 15 615 17 HOH HOH . I 4 HOH C 16 616 30 HOH HOH . I 4 HOH C 17 617 78 HOH HOH . I 4 HOH C 18 618 19 HOH HOH . I 4 HOH C 19 619 70 HOH HOH . I 4 HOH C 20 620 75 HOH HOH . I 4 HOH C 21 621 53 HOH HOH . I 4 HOH C 22 622 58 HOH HOH . I 4 HOH C 23 623 64 HOH HOH . I 4 HOH C 24 624 34 HOH HOH . I 4 HOH C 25 625 22 HOH HOH . I 4 HOH C 26 626 15 HOH HOH . I 4 HOH C 27 627 7 HOH HOH . I 4 HOH C 28 628 1 HOH HOH . I 4 HOH C 29 629 23 HOH HOH . I 4 HOH C 30 630 82 HOH HOH . I 4 HOH C 31 631 63 HOH HOH . J 4 HOH D 1 801 24 HOH HOH . J 4 HOH D 2 802 40 HOH HOH . J 4 HOH D 3 803 3 HOH HOH . J 4 HOH D 4 804 35 HOH HOH . J 4 HOH D 5 805 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 4KM . . . E 3 136.73 24.415 65.377 1 33.79 ? C2 4KM 501 A 1 HETATM 2 C C3 4KM . . . E 3 136.946 23.1 65.031 1 33.69 ? C3 4KM 501 A 1 HETATM 3 C C18 4KM . . . E 3 140.328 17.343 65.83 1 35.66 ? C18 4KM 501 A 1 HETATM 4 C C20 4KM . . . E 3 139.174 17.32 63.761 1 35.11 ? C20 4KM 501 A 1 HETATM 5 C C17 4KM . . . E 3 140.043 18.669 65.992 1 34.88 ? C17 4KM 501 A 1 HETATM 6 C C21 4KM . . . E 3 138.867 18.658 63.911 1 34.48 ? C21 4KM 501 A 1 HETATM 7 C C6 4KM . . . E 3 139.036 24.848 65.022 1 33.83 ? C6 4KM 501 A 1 HETATM 8 C C5 4KM . . . E 3 139.257 23.536 64.67 1 33.81 ? C5 4KM 501 A 1 HETATM 9 C C1 4KM . . . E 3 137.787 25.293 65.374 1 34.33 ? C1 4KM 501 A 1 HETATM 10 C C4 4KM . . . E 3 138.193 22.636 64.673 1 33.76 ? C4 4KM 501 A 1 HETATM 11 C C19 4KM . . . E 3 139.918 16.647 64.712 1 36.02 ? C19 4KM 501 A 1 HETATM 12 C C16 4KM . . . E 3 139.31 19.317 65.037 1 34.79 ? C16 4KM 501 A 1 HETATM 13 C C7 4KM . . . E 3 140.692 23.364 64.349 1 34.04 ? C7 4KM 501 A 1 HETATM 14 C C24 4KM . . . E 3 141.393 14.585 64.263 1 36.71 ? C24 4KM 501 A 1 HETATM 15 C C26 4KM . . . E 3 142.677 15.335 64.062 1 36.53 ? C26 4KM 501 A 1 HETATM 16 C C11 4KM . . . E 3 142.527 20.956 64.452 1 34.74 ? C11 4KM 501 A 1 HETATM 17 C C12 4KM . . . E 3 141.634 20.574 62.237 1 34.92 ? C12 4KM 501 A 1 HETATM 18 C C13 4KM . . . E 3 143.227 22.346 62.57 1 34.71 ? C13 4KM 501 A 1 HETATM 19 C C23 4KM . . . E 3 139.063 14.419 64.839 1 36.27 ? C23 4KM 501 A 1 HETATM 20 C C14 4KM . . . E 3 138.221 21.184 64.346 1 34.1 ? C14 4KM 501 A 1 HETATM 21 C C27 4KM . . . E 3 137.59 26.711 65.745 1 34.79 ? C27 4KM 501 A 1 HETATM 22 C C10 4KM . . . E 3 142.057 21.651 63.195 1 34.78 ? C10 4KM 501 A 1 HETATM 23 N N22 4KM . . . E 3 140.203 15.26 64.559 1 36.76 ? N22 4KM 501 A 1 HETATM 24 O O8 4KM . . . E 3 141.477 24.07 64.968 1 34.19 ? O8 4KM 501 A 1 HETATM 25 O O25 4KM . . . E 3 141.429 13.366 64.155 1 37.3 ? O25 4KM 501 A 1 HETATM 26 O O15 4KM . . . E 3 139.088 20.646 65.314 1 34.88 ? O15 4KM 501 A 1 HETATM 27 O O9 4KM . . . E 3 140.938 22.551 63.268 1 34.39 ? O9 4KM 501 A 1 HETATM 28 F F28 4KM . . . E 3 136.536 27.252 65.087 1 35.44 ? F28 4KM 501 A 1 HETATM 29 F F29 4KM . . . E 3 137.365 26.864 67.075 1 35.09 ? F29 4KM 501 A 1 HETATM 30 F F30 4KM . . . E 3 138.666 27.498 65.486 1 35.68 ? F30 4KM 501 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #