data_5AX0
#
_model_server_result.job_id            MAL052Y2icy9rnBbaCICQA 
_model_server_result.datetime_utc      '2025-02-17 03:51:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ax0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    5AX0 
#
_exptl.entry_id    5AX0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          119.17 
_cell.angle_gamma         90 
_cell.entry_id            5AX0 
_cell.length_a            75.99 
_cell.length_b            101.63 
_cell.length_c            43.76 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5AX0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             225 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              218 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.273 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O19 OLB doub 348 n n 
C1 O20 OLB sing 349 n n 
C2 C1 OLB sing 350 n n 
C3 C2 OLB sing 351 n n 
C4 C3 OLB sing 352 n n 
C5 C4 OLB sing 353 n n 
C5 C6 OLB sing 354 n n 
O20 C21 OLB sing 355 n n 
C21 C22 OLB sing 356 n n 
C22 C24 OLB sing 357 n n 
O23 C22 OLB sing 358 n n 
C24 O25 OLB sing 359 n n 
C6 C7 OLB sing 360 n n 
C7 C8 OLB sing 361 n n 
C8 C9 OLB sing 362 n n 
C9 C10 OLB doub 363 z n 
C10 C11 OLB sing 364 n n 
C2 H2 OLB sing 365 n n 
C2 H2A OLB sing 366 n n 
C3 H3 OLB sing 367 n n 
C3 H3A OLB sing 368 n n 
C4 H4 OLB sing 369 n n 
C4 H4A OLB sing 370 n n 
C5 H5 OLB sing 371 n n 
C5 H5A OLB sing 372 n n 
C21 H21 OLB sing 373 n n 
C21 H21A OLB sing 374 n n 
C22 H22 OLB sing 375 n n 
O23 HO23 OLB sing 376 n n 
C24 H24 OLB sing 377 n n 
C24 H24A OLB sing 378 n n 
O25 HO25 OLB sing 379 n n 
C6 H16 OLB sing 380 n n 
C6 H17 OLB sing 381 n n 
C7 H18 OLB sing 382 n n 
C7 H19 OLB sing 383 n n 
C8 H20 OLB sing 384 n n 
C8 H211 OLB sing 385 n n 
C9 H221 OLB sing 386 n n 
C10 H23 OLB sing 387 n n 
C11 H241 OLB sing 388 n n 
C11 H25 OLB sing 389 n n 
C11 C12 OLB sing 390 n n 
C12 H26 OLB sing 391 n n 
C12 C13 OLB sing 392 n n 
C12 H27 OLB sing 393 n n 
C13 C14 OLB sing 394 n n 
C13 H28 OLB sing 395 n n 
C13 H29 OLB sing 396 n n 
C14 H30 OLB sing 397 n n 
C14 H31 OLB sing 398 n n 
C14 C15 OLB sing 399 n n 
C15 C16 OLB sing 400 n n 
C15 H32 OLB sing 401 n n 
C15 H33 OLB sing 402 n n 
C16 H34 OLB sing 403 n n 
C16 H35 OLB sing 404 n n 
C16 C17 OLB sing 405 n n 
C17 C18 OLB sing 406 n n 
C17 H36 OLB sing 407 n n 
C17 H37 OLB sing 408 n n 
C18 H38 OLB sing 409 n n 
C18 H39 OLB sing 410 n n 
C18 H40 OLB sing 411 n n 
#
_atom_sites.entry_id                     5AX0 
_atom_sites.fract_transf_matrix[1][1]    0.01316 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007346 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00984 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026171 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RET A 1 301 1 RET RET . 
C 3 OLB A 1 302 1 OLB OLC . 
D 3 OLB A 1 303 2 OLB OLC . 
E 3 OLB A 1 304 3 OLB OLC . 
F 4 D12 A 1 305 1 D12 D12 . 
G 4 D12 A 1 306 2 D12 D12 . 
H 5 C14 A 1 307 1 C14 C14 . 
I 6 R16 A 1 308 1 R16 R16 . 
J 7 D10 A 1 309 1 D10 D10 . 
K 7 D10 A 1 310 2 D10 D10 . 
L 8 HOH A 1 401 527 HOH HOH . 
L 8 HOH A 2 402 410 HOH HOH . 
L 8 HOH A 3 403 409 HOH HOH . 
L 8 HOH A 4 404 515 HOH HOH . 
L 8 HOH A 5 405 450 HOH HOH . 
L 8 HOH A 6 406 403 HOH HOH . 
L 8 HOH A 7 407 419 HOH HOH . 
L 8 HOH A 8 408 523 HOH HOH . 
L 8 HOH A 9 409 404 HOH HOH . 
L 8 HOH A 10 410 446 HOH HOH . 
L 8 HOH A 11 411 415 HOH HOH . 
L 8 HOH A 12 412 444 HOH HOH . 
L 8 HOH A 13 413 433 HOH HOH . 
L 8 HOH A 14 414 440 HOH HOH . 
L 8 HOH A 15 415 451 HOH HOH . 
L 8 HOH A 16 416 418 HOH HOH . 
L 8 HOH A 17 417 402 HOH HOH . 
L 8 HOH A 18 418 428 HOH HOH . 
L 8 HOH A 19 419 401 HOH HOH . 
L 8 HOH A 20 420 459 HOH HOH . 
L 8 HOH A 21 421 507 HOH HOH . 
L 8 HOH A 22 422 420 HOH HOH . 
L 8 HOH A 23 423 538 HOH HOH . 
L 8 HOH A 24 424 425 HOH HOH . 
L 8 HOH A 25 425 414 HOH HOH . 
L 8 HOH A 26 426 506 HOH HOH . 
L 8 HOH A 27 427 438 HOH HOH . 
L 8 HOH A 28 428 412 HOH HOH . 
L 8 HOH A 29 429 504 HOH HOH . 
L 8 HOH A 30 430 456 HOH HOH . 
L 8 HOH A 31 431 424 HOH HOH . 
L 8 HOH A 32 432 407 HOH HOH . 
L 8 HOH A 33 433 539 HOH HOH . 
L 8 HOH A 34 434 511 HOH HOH . 
L 8 HOH A 35 435 441 HOH HOH . 
L 8 HOH A 36 436 429 HOH HOH . 
L 8 HOH A 37 437 405 HOH HOH . 
L 8 HOH A 38 438 431 HOH HOH . 
L 8 HOH A 39 439 432 HOH HOH . 
L 8 HOH A 40 440 517 HOH HOH . 
L 8 HOH A 41 441 447 HOH HOH . 
L 8 HOH A 42 442 422 HOH HOH . 
L 8 HOH A 43 443 449 HOH HOH . 
L 8 HOH A 44 444 526 HOH HOH . 
L 8 HOH A 45 445 445 HOH HOH . 
L 8 HOH A 46 446 427 HOH HOH . 
L 8 HOH A 47 447 454 HOH HOH . 
L 8 HOH A 48 448 448 HOH HOH . 
L 8 HOH A 49 449 416 HOH HOH . 
L 8 HOH A 50 450 457 HOH HOH . 
L 8 HOH A 51 451 505 HOH HOH . 
L 8 HOH A 52 452 501 HOH HOH . 
L 8 HOH A 53 453 518 HOH HOH . 
L 8 HOH A 54 454 413 HOH HOH . 
L 8 HOH A 55 455 513 HOH HOH . 
L 8 HOH A 56 456 509 HOH HOH . 
L 8 HOH A 57 457 430 HOH HOH . 
L 8 HOH A 58 458 435 HOH HOH . 
L 8 HOH A 59 459 514 HOH HOH . 
L 8 HOH A 60 460 535 HOH HOH . 
L 8 HOH A 61 461 408 HOH HOH . 
L 8 HOH A 62 462 533 HOH HOH . 
L 8 HOH A 63 463 442 HOH HOH . 
L 8 HOH A 64 464 436 HOH HOH . 
L 8 HOH A 65 465 423 HOH HOH . 
L 8 HOH A 66 466 453 HOH HOH . 
L 8 HOH A 67 467 439 HOH HOH . 
L 8 HOH A 68 468 455 HOH HOH . 
L 8 HOH A 69 469 510 HOH HOH . 
L 8 HOH A 70 470 503 HOH HOH . 
L 8 HOH A 71 471 525 HOH HOH . 
L 8 HOH A 72 472 443 HOH HOH . 
L 8 HOH A 73 473 406 HOH HOH . 
L 8 HOH A 74 474 437 HOH HOH . 
L 8 HOH A 75 475 417 HOH HOH . 
L 8 HOH A 76 476 529 HOH HOH . 
L 8 HOH A 77 477 512 HOH HOH . 
L 8 HOH A 78 478 537 HOH HOH . 
L 8 HOH A 79 479 528 HOH HOH . 
L 8 HOH A 80 480 522 HOH HOH . 
L 8 HOH A 81 481 520 HOH HOH . 
L 8 HOH A 82 482 530 HOH HOH . 
L 8 HOH A 83 483 434 HOH HOH . 
L 8 HOH A 84 484 536 HOH HOH . 
L 8 HOH A 85 485 426 HOH HOH . 
L 8 HOH A 86 486 458 HOH HOH . 
L 8 HOH A 87 487 508 HOH HOH . 
L 8 HOH A 88 488 521 HOH HOH . 
L 8 HOH A 89 489 532 HOH HOH . 
L 8 HOH A 90 490 534 HOH HOH . 
L 8 HOH A 91 491 519 HOH HOH . 
L 8 HOH A 92 492 524 HOH HOH . 
L 8 HOH A 93 493 531 HOH HOH . 
L 8 HOH A 94 494 411 HOH HOH . 
L 8 HOH A 95 495 421 HOH HOH . 
L 8 HOH A 96 496 452 HOH HOH . 
L 8 HOH A 97 497 516 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLB . . . C 3 0.127 64.007 18.702 1 62.53 ? C1 OLB 302 A 1 
HETATM 2 C C2 OLB . . . C 3 -0.397 63.129 17.588 1 60.79 ? C2 OLB 302 A 1 
HETATM 3 C C3 OLB . . . C 3 -0.883 61.793 18.102 1 58.87 ? C3 OLB 302 A 1 
HETATM 4 C C4 OLB . . . C 3 -0.296 60.622 17.346 1 56.13 ? C4 OLB 302 A 1 
HETATM 5 C C5 OLB . . . C 3 0.599 59.79 18.234 1 53.37 ? C5 OLB 302 A 1 
HETATM 6 O O19 OLB . . . C 3 0.995 63.637 19.467 1 63.93 ? O19 OLB 302 A 1 
HETATM 7 O O20 OLB . . . C 3 -0.443 65.212 18.778 1 62.65 ? O20 OLB 302 A 1 
HETATM 8 C C21 OLB . . . C 3 0.377 66.218 19.326 1 62.23 ? C21 OLB 302 A 1 
HETATM 9 C C22 OLB . . . C 3 -0.496 67.307 19.916 1 61.59 ? C22 OLB 302 A 1 
HETATM 10 O O23 OLB . . . C 3 0.066 68.572 19.645 1 59.19 ? O23 OLB 302 A 1 
HETATM 11 C C24 OLB . . . C 3 -1.891 67.236 19.332 1 62.9 ? C24 OLB 302 A 1 
HETATM 12 O O25 OLB . . . C 3 -2.824 67.23 20.392 1 62.52 ? O25 OLB 302 A 1 
HETATM 13 C C6 OLB . . . C 3 1.299 58.68 17.486 1 50.58 ? C6 OLB 302 A 1 
HETATM 14 C C7 OLB . . . C 3 0.91 57.338 18.048 1 50.42 ? C7 OLB 302 A 1 
HETATM 15 C C8 OLB . . . C 3 2.086 56.42 18.297 1 49.38 ? C8 OLB 302 A 1 
HETATM 16 C C9 OLB . . . C 3 2.473 55.652 17.052 1 48.37 ? C9 OLB 302 A 1 
HETATM 17 C C10 OLB . . . C 3 1.845 54.511 16.706 1 49.1 ? C10 OLB 302 A 1 
HETATM 18 C C11 OLB . . . C 3 0.734 53.945 17.557 1 52.95 ? C11 OLB 302 A 1 
HETATM 19 C C12 OLB . . . C 3 0.425 52.513 17.192 1 57.42 ? C12 OLB 302 A 1 
HETATM 20 C C13 OLB . . . C 3 0.228 52.312 15.707 1 60.14 ? C13 OLB 302 A 1 
HETATM 21 C C14 OLB . . . C 3 -0.964 51.429 15.406 1 62.05 ? C14 OLB 302 A 1 
HETATM 22 C C15 OLB . . . C 3 -1.079 50.246 16.346 1 63.02 ? C15 OLB 302 A 1 
HETATM 23 C C16 OLB . . . C 3 -0.008 49.202 16.117 1 63.47 ? C16 OLB 302 A 1 
HETATM 24 C C17 OLB . . . C 3 -0.062 48.624 14.721 1 63.1 ? C17 OLB 302 A 1 
HETATM 25 C C18 OLB . . . C 3 -1.401 47.99 14.415 1 62.09 ? C18 OLB 302 A 1 
#
_model_server_stats.io_time_ms              77 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           25 
#