data_5AX0
#
_model_server_result.job_id            YQORWa5LBwzj1SLQCxYxiA 
_model_server_result.datetime_utc      '2024-11-26 17:02:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ax0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":304}' 
#
_entry.id    5AX0 
#
_exptl.entry_id    5AX0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          119.17 
_cell.angle_gamma         90 
_cell.entry_id            5AX0 
_cell.length_a            75.99 
_cell.length_b            101.63 
_cell.length_c            43.76 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5AX0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             225 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              218 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.273 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O19 OLB doub 348 n n 
C1 O20 OLB sing 349 n n 
C2 C1 OLB sing 350 n n 
C3 C2 OLB sing 351 n n 
C4 C3 OLB sing 352 n n 
C5 C4 OLB sing 353 n n 
C5 C6 OLB sing 354 n n 
O20 C21 OLB sing 355 n n 
C21 C22 OLB sing 356 n n 
C22 C24 OLB sing 357 n n 
O23 C22 OLB sing 358 n n 
C24 O25 OLB sing 359 n n 
C6 C7 OLB sing 360 n n 
C7 C8 OLB sing 361 n n 
C8 C9 OLB sing 362 n n 
C9 C10 OLB doub 363 z n 
C10 C11 OLB sing 364 n n 
C2 H2 OLB sing 365 n n 
C2 H2A OLB sing 366 n n 
C3 H3 OLB sing 367 n n 
C3 H3A OLB sing 368 n n 
C4 H4 OLB sing 369 n n 
C4 H4A OLB sing 370 n n 
C5 H5 OLB sing 371 n n 
C5 H5A OLB sing 372 n n 
C21 H21 OLB sing 373 n n 
C21 H21A OLB sing 374 n n 
C22 H22 OLB sing 375 n n 
O23 HO23 OLB sing 376 n n 
C24 H24 OLB sing 377 n n 
C24 H24A OLB sing 378 n n 
O25 HO25 OLB sing 379 n n 
C6 H16 OLB sing 380 n n 
C6 H17 OLB sing 381 n n 
C7 H18 OLB sing 382 n n 
C7 H19 OLB sing 383 n n 
C8 H20 OLB sing 384 n n 
C8 H211 OLB sing 385 n n 
C9 H221 OLB sing 386 n n 
C10 H23 OLB sing 387 n n 
C11 H241 OLB sing 388 n n 
C11 H25 OLB sing 389 n n 
C11 C12 OLB sing 390 n n 
C12 H26 OLB sing 391 n n 
C12 C13 OLB sing 392 n n 
C12 H27 OLB sing 393 n n 
C13 C14 OLB sing 394 n n 
C13 H28 OLB sing 395 n n 
C13 H29 OLB sing 396 n n 
C14 H30 OLB sing 397 n n 
C14 H31 OLB sing 398 n n 
C14 C15 OLB sing 399 n n 
C15 C16 OLB sing 400 n n 
C15 H32 OLB sing 401 n n 
C15 H33 OLB sing 402 n n 
C16 H34 OLB sing 403 n n 
C16 H35 OLB sing 404 n n 
C16 C17 OLB sing 405 n n 
C17 C18 OLB sing 406 n n 
C17 H36 OLB sing 407 n n 
C17 H37 OLB sing 408 n n 
C18 H38 OLB sing 409 n n 
C18 H39 OLB sing 410 n n 
C18 H40 OLB sing 411 n n 
#
_atom_sites.entry_id                     5AX0 
_atom_sites.fract_transf_matrix[1][1]    0.01316 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007346 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00984 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026171 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RET A 1 301 1 RET RET . 
C 3 OLB A 1 302 1 OLB OLC . 
D 3 OLB A 1 303 2 OLB OLC . 
E 3 OLB A 1 304 3 OLB OLC . 
F 4 D12 A 1 305 1 D12 D12 . 
G 4 D12 A 1 306 2 D12 D12 . 
H 5 C14 A 1 307 1 C14 C14 . 
I 6 R16 A 1 308 1 R16 R16 . 
J 7 D10 A 1 309 1 D10 D10 . 
K 7 D10 A 1 310 2 D10 D10 . 
L 8 HOH A 1 401 527 HOH HOH . 
L 8 HOH A 2 402 410 HOH HOH . 
L 8 HOH A 3 403 409 HOH HOH . 
L 8 HOH A 4 404 515 HOH HOH . 
L 8 HOH A 5 405 450 HOH HOH . 
L 8 HOH A 6 406 403 HOH HOH . 
L 8 HOH A 7 407 419 HOH HOH . 
L 8 HOH A 8 408 523 HOH HOH . 
L 8 HOH A 9 409 404 HOH HOH . 
L 8 HOH A 10 410 446 HOH HOH . 
L 8 HOH A 11 411 415 HOH HOH . 
L 8 HOH A 12 412 444 HOH HOH . 
L 8 HOH A 13 413 433 HOH HOH . 
L 8 HOH A 14 414 440 HOH HOH . 
L 8 HOH A 15 415 451 HOH HOH . 
L 8 HOH A 16 416 418 HOH HOH . 
L 8 HOH A 17 417 402 HOH HOH . 
L 8 HOH A 18 418 428 HOH HOH . 
L 8 HOH A 19 419 401 HOH HOH . 
L 8 HOH A 20 420 459 HOH HOH . 
L 8 HOH A 21 421 507 HOH HOH . 
L 8 HOH A 22 422 420 HOH HOH . 
L 8 HOH A 23 423 538 HOH HOH . 
L 8 HOH A 24 424 425 HOH HOH . 
L 8 HOH A 25 425 414 HOH HOH . 
L 8 HOH A 26 426 506 HOH HOH . 
L 8 HOH A 27 427 438 HOH HOH . 
L 8 HOH A 28 428 412 HOH HOH . 
L 8 HOH A 29 429 504 HOH HOH . 
L 8 HOH A 30 430 456 HOH HOH . 
L 8 HOH A 31 431 424 HOH HOH . 
L 8 HOH A 32 432 407 HOH HOH . 
L 8 HOH A 33 433 539 HOH HOH . 
L 8 HOH A 34 434 511 HOH HOH . 
L 8 HOH A 35 435 441 HOH HOH . 
L 8 HOH A 36 436 429 HOH HOH . 
L 8 HOH A 37 437 405 HOH HOH . 
L 8 HOH A 38 438 431 HOH HOH . 
L 8 HOH A 39 439 432 HOH HOH . 
L 8 HOH A 40 440 517 HOH HOH . 
L 8 HOH A 41 441 447 HOH HOH . 
L 8 HOH A 42 442 422 HOH HOH . 
L 8 HOH A 43 443 449 HOH HOH . 
L 8 HOH A 44 444 526 HOH HOH . 
L 8 HOH A 45 445 445 HOH HOH . 
L 8 HOH A 46 446 427 HOH HOH . 
L 8 HOH A 47 447 454 HOH HOH . 
L 8 HOH A 48 448 448 HOH HOH . 
L 8 HOH A 49 449 416 HOH HOH . 
L 8 HOH A 50 450 457 HOH HOH . 
L 8 HOH A 51 451 505 HOH HOH . 
L 8 HOH A 52 452 501 HOH HOH . 
L 8 HOH A 53 453 518 HOH HOH . 
L 8 HOH A 54 454 413 HOH HOH . 
L 8 HOH A 55 455 513 HOH HOH . 
L 8 HOH A 56 456 509 HOH HOH . 
L 8 HOH A 57 457 430 HOH HOH . 
L 8 HOH A 58 458 435 HOH HOH . 
L 8 HOH A 59 459 514 HOH HOH . 
L 8 HOH A 60 460 535 HOH HOH . 
L 8 HOH A 61 461 408 HOH HOH . 
L 8 HOH A 62 462 533 HOH HOH . 
L 8 HOH A 63 463 442 HOH HOH . 
L 8 HOH A 64 464 436 HOH HOH . 
L 8 HOH A 65 465 423 HOH HOH . 
L 8 HOH A 66 466 453 HOH HOH . 
L 8 HOH A 67 467 439 HOH HOH . 
L 8 HOH A 68 468 455 HOH HOH . 
L 8 HOH A 69 469 510 HOH HOH . 
L 8 HOH A 70 470 503 HOH HOH . 
L 8 HOH A 71 471 525 HOH HOH . 
L 8 HOH A 72 472 443 HOH HOH . 
L 8 HOH A 73 473 406 HOH HOH . 
L 8 HOH A 74 474 437 HOH HOH . 
L 8 HOH A 75 475 417 HOH HOH . 
L 8 HOH A 76 476 529 HOH HOH . 
L 8 HOH A 77 477 512 HOH HOH . 
L 8 HOH A 78 478 537 HOH HOH . 
L 8 HOH A 79 479 528 HOH HOH . 
L 8 HOH A 80 480 522 HOH HOH . 
L 8 HOH A 81 481 520 HOH HOH . 
L 8 HOH A 82 482 530 HOH HOH . 
L 8 HOH A 83 483 434 HOH HOH . 
L 8 HOH A 84 484 536 HOH HOH . 
L 8 HOH A 85 485 426 HOH HOH . 
L 8 HOH A 86 486 458 HOH HOH . 
L 8 HOH A 87 487 508 HOH HOH . 
L 8 HOH A 88 488 521 HOH HOH . 
L 8 HOH A 89 489 532 HOH HOH . 
L 8 HOH A 90 490 534 HOH HOH . 
L 8 HOH A 91 491 519 HOH HOH . 
L 8 HOH A 92 492 524 HOH HOH . 
L 8 HOH A 93 493 531 HOH HOH . 
L 8 HOH A 94 494 411 HOH HOH . 
L 8 HOH A 95 495 421 HOH HOH . 
L 8 HOH A 96 496 452 HOH HOH . 
L 8 HOH A 97 497 516 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLB . . . E 3 3.13 33.056 23.212 1 68.49 ? C1 OLB 304 A 1 
HETATM 2 C C2 OLB . . . E 3 2.377 34.277 23.688 1 66.86 ? C2 OLB 304 A 1 
HETATM 3 C C3 OLB . . . E 3 1.026 34.386 23.019 1 64.5 ? C3 OLB 304 A 1 
HETATM 4 C C4 OLB . . . E 3 0.778 35.772 22.472 1 61.66 ? C4 OLB 304 A 1 
HETATM 5 C C5 OLB . . . E 3 0.543 36.79 23.565 1 59.24 ? C5 OLB 304 A 1 
HETATM 6 O O19 OLB . . . E 3 3.031 32.629 22.079 1 71.57 ? O19 OLB 304 A 1 
HETATM 7 O O20 OLB . . . E 3 3.917 32.495 24.129 1 67.1 ? O20 OLB 304 A 1 
HETATM 8 C C21 OLB . . . E 3 3.396 31.298 24.652 1 68.02 ? C21 OLB 304 A 1 
HETATM 9 C C22 OLB . . . E 3 4.514 30.552 25.341 1 66.81 ? C22 OLB 304 A 1 
HETATM 10 O O23 OLB . . . E 3 3.989 29.843 26.438 1 64.58 ? O23 OLB 304 A 1 
HETATM 11 C C24 OLB . . . E 3 5.133 29.581 24.36 1 67.84 ? C24 OLB 304 A 1 
HETATM 12 O O25 OLB . . . E 3 6.03 30.29 23.534 1 68.92 ? O25 OLB 304 A 1 
HETATM 13 C C6 OLB . . . E 3 -0.086 38.053 23.022 1 57.09 ? C6 OLB 304 A 1 
HETATM 14 C C7 OLB . . . E 3 0.102 39.236 23.945 1 56.69 ? C7 OLB 304 A 1 
HETATM 15 C C8 OLB . . . E 3 -0.128 40.552 23.235 1 57.69 ? C8 OLB 304 A 1 
HETATM 16 C C9 OLB . . . E 3 1.113 41.022 22.504 1 57.83 ? C9 OLB 304 A 1 
HETATM 17 C C10 OLB . . . E 3 1.084 42.075 21.657 1 55.41 ? C10 OLB 304 A 1 
HETATM 18 C C11 OLB . . . E 3 -0.19 42.85 21.396 1 53.71 ? C11 OLB 304 A 1 
HETATM 19 C C12 OLB . . . E 3 -0.392 43.964 22.399 1 52.8 ? C12 OLB 304 A 1 
HETATM 20 C C13 OLB . . . E 3 -1.337 45.04 21.913 1 50.18 ? C13 OLB 304 A 1 
HETATM 21 C C14 OLB . . . E 3 -2.094 45.685 23.054 1 48.76 ? C14 OLB 304 A 1 
HETATM 22 C C15 OLB . . . E 3 -3.032 46.769 22.574 1 49.47 ? C15 OLB 304 A 1 
HETATM 23 C C16 OLB . . . E 3 -3.789 47.426 23.704 1 50.69 ? C16 OLB 304 A 1 
HETATM 24 C C17 OLB . . . E 3 -4.741 48.488 23.197 1 53.4 ? C17 OLB 304 A 1 
HETATM 25 C C18 OLB . . . E 3 -5.378 49.276 24.32 1 54.48 ? C18 OLB 304 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           25 
#