data_5AX9 # _model_server_result.job_id PfbqFy_V11AyZoZBKpP35w _model_server_result.datetime_utc '2024-10-15 11:20:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ax9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 5AX9 # _exptl.entry_id 5AX9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 416.472 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methoxy-3-[2-[(3-methoxy-4-morpholin-4-yl-phenyl)amino]pyridin-4-yl]benzenecarbonitrile _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5AX9 _cell.length_a 47.178 _cell.length_b 123.204 _cell.length_c 157.652 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AX9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,I 1 1 B,F,G,J 2 1 C,H,K 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C24 H24 N4 O3' _chem_comp.formula_weight 416.472 _chem_comp.id 4KT _chem_comp.mon_nstd_flag . _chem_comp.name 4-methoxy-3-[2-[(3-methoxy-4-morpholin-4-yl-phenyl)amino]pyridin-4-yl]benzenecarbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 O1 4KT sing 1 n n O3 C21 4KT sing 2 n n O3 C22 4KT sing 3 n n C5 C3 4KT doub 4 n y C5 C6 4KT sing 5 n y C3 C1 4KT sing 6 n y C21 C23 4KT sing 7 n n C22 C20 4KT sing 8 n n O1 C6 4KT sing 9 n n C6 C4 4KT doub 10 n y C23 N2 4KT sing 11 n n C1 C12 4KT sing 12 n n C1 C2 4KT doub 13 n y C20 N2 4KT sing 14 n n N2 C17 4KT sing 15 n n C12 N4 4KT trip 16 n n C16 C17 4KT doub 17 n y C16 C14 4KT sing 18 n y C4 C2 4KT sing 19 n y C4 C8 4KT sing 20 n n C17 C19 4KT sing 21 n y C14 C15 4KT doub 22 n y C8 C7 4KT doub 23 n y C8 C10 4KT sing 24 n y C7 C9 4KT sing 25 n y C19 O2 4KT sing 26 n n C19 C18 4KT doub 27 n y C15 C18 4KT sing 28 n y C15 N3 4KT sing 29 n n O2 C24 4KT sing 30 n n C10 C11 4KT doub 31 n y C9 N3 4KT sing 32 n n C9 N1 4KT doub 33 n y C11 N1 4KT sing 34 n y C14 H1 4KT sing 35 n n C16 H2 4KT sing 36 n n C22 H3 4KT sing 37 n n C22 H4 4KT sing 38 n n C21 H5 4KT sing 39 n n C21 H6 4KT sing 40 n n C20 H7 4KT sing 41 n n C20 H8 4KT sing 42 n n C18 H9 4KT sing 43 n n C3 H10 4KT sing 44 n n C2 H11 4KT sing 45 n n C5 H12 4KT sing 46 n n C11 H13 4KT sing 47 n n C24 H14 4KT sing 48 n n C24 H15 4KT sing 49 n n C24 H16 4KT sing 50 n n C7 H17 4KT sing 51 n n C10 H18 4KT sing 52 n n C13 H19 4KT sing 53 n n C13 H20 4KT sing 54 n n C13 H21 4KT sing 55 n n C23 H22 4KT sing 56 n n C23 H23 4KT sing 57 n n N3 H24 4KT sing 58 n n # _atom_sites.entry_id 5AX9 _atom_sites.fract_transf_matrix[1][1] 0.021196 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 4KT A 1 401 1 4KT 788 . E 3 SO4 A 1 402 1 SO4 SO4 . F 2 4KT B 1 401 2 4KT 788 . G 3 SO4 B 1 402 2 SO4 SO4 . H 2 4KT C 1 401 3 4KT 788 . I 4 HOH A 1 501 87 HOH HOH . I 4 HOH A 2 502 103 HOH HOH . I 4 HOH A 3 503 34 HOH HOH . I 4 HOH A 4 504 83 HOH HOH . I 4 HOH A 5 505 36 HOH HOH . I 4 HOH A 6 506 51 HOH HOH . I 4 HOH A 7 507 4 HOH HOH . I 4 HOH A 8 508 43 HOH HOH . I 4 HOH A 9 509 58 HOH HOH . I 4 HOH A 10 510 8 HOH HOH . I 4 HOH A 11 511 160 HOH HOH . I 4 HOH A 12 512 156 HOH HOH . I 4 HOH A 13 513 26 HOH HOH . I 4 HOH A 14 514 60 HOH HOH . I 4 HOH A 15 515 5 HOH HOH . I 4 HOH A 16 516 12 HOH HOH . I 4 HOH A 17 517 16 HOH HOH . I 4 HOH A 18 518 71 HOH HOH . I 4 HOH A 19 519 68 HOH HOH . I 4 HOH A 20 520 42 HOH HOH . I 4 HOH A 21 521 74 HOH HOH . I 4 HOH A 22 522 115 HOH HOH . I 4 HOH A 23 523 76 HOH HOH . I 4 HOH A 24 524 167 HOH HOH . I 4 HOH A 25 525 7 HOH HOH . I 4 HOH A 26 526 67 HOH HOH . J 4 HOH B 1 501 163 HOH HOH . J 4 HOH B 2 502 108 HOH HOH . J 4 HOH B 3 503 30 HOH HOH . J 4 HOH B 4 504 17 HOH HOH . J 4 HOH B 5 505 94 HOH HOH . J 4 HOH B 6 506 29 HOH HOH . J 4 HOH B 7 507 150 HOH HOH . J 4 HOH B 8 508 24 HOH HOH . J 4 HOH B 9 509 6 HOH HOH . J 4 HOH B 10 510 157 HOH HOH . J 4 HOH B 11 511 54 HOH HOH . J 4 HOH B 12 512 98 HOH HOH . J 4 HOH B 13 513 49 HOH HOH . J 4 HOH B 14 514 48 HOH HOH . J 4 HOH B 15 515 142 HOH HOH . J 4 HOH B 16 516 47 HOH HOH . J 4 HOH B 17 517 28 HOH HOH . J 4 HOH B 18 518 33 HOH HOH . J 4 HOH B 19 519 53 HOH HOH . J 4 HOH B 20 520 2 HOH HOH . J 4 HOH B 21 521 55 HOH HOH . J 4 HOH B 22 522 3 HOH HOH . J 4 HOH B 23 523 89 HOH HOH . J 4 HOH B 24 524 73 HOH HOH . J 4 HOH B 25 525 19 HOH HOH . J 4 HOH B 26 526 168 HOH HOH . J 4 HOH B 27 527 31 HOH HOH . J 4 HOH B 28 528 64 HOH HOH . J 4 HOH B 29 529 116 HOH HOH . J 4 HOH B 30 530 15 HOH HOH . J 4 HOH B 31 531 52 HOH HOH . J 4 HOH B 32 532 132 HOH HOH . J 4 HOH B 33 533 62 HOH HOH . J 4 HOH B 34 534 161 HOH HOH . J 4 HOH B 35 535 66 HOH HOH . J 4 HOH B 36 536 32 HOH HOH . J 4 HOH B 37 537 110 HOH HOH . J 4 HOH B 38 538 114 HOH HOH . K 4 HOH C 1 501 81 HOH HOH . K 4 HOH C 2 502 59 HOH HOH . K 4 HOH C 3 503 27 HOH HOH . K 4 HOH C 4 504 97 HOH HOH . K 4 HOH C 5 505 136 HOH HOH . K 4 HOH C 6 506 85 HOH HOH . K 4 HOH C 7 507 125 HOH HOH . K 4 HOH C 8 508 37 HOH HOH . K 4 HOH C 9 509 69 HOH HOH . K 4 HOH C 10 510 148 HOH HOH . K 4 HOH C 11 511 45 HOH HOH . K 4 HOH C 12 512 106 HOH HOH . K 4 HOH C 13 513 61 HOH HOH . K 4 HOH C 14 514 39 HOH HOH . K 4 HOH C 15 515 14 HOH HOH . K 4 HOH C 16 516 11 HOH HOH . K 4 HOH C 17 517 90 HOH HOH . K 4 HOH C 18 518 1 HOH HOH . K 4 HOH C 19 519 22 HOH HOH . K 4 HOH C 20 520 23 HOH HOH . K 4 HOH C 21 521 38 HOH HOH . K 4 HOH C 22 522 57 HOH HOH . K 4 HOH C 23 523 35 HOH HOH . K 4 HOH C 24 524 165 HOH HOH . K 4 HOH C 25 525 10 HOH HOH . K 4 HOH C 26 526 79 HOH HOH . K 4 HOH C 27 527 111 HOH HOH . K 4 HOH C 28 528 153 HOH HOH . K 4 HOH C 29 529 141 HOH HOH . K 4 HOH C 30 530 25 HOH HOH . K 4 HOH C 31 531 40 HOH HOH . K 4 HOH C 32 532 9 HOH HOH . K 4 HOH C 33 533 124 HOH HOH . K 4 HOH C 34 534 56 HOH HOH . K 4 HOH C 35 535 65 HOH HOH . K 4 HOH C 36 536 44 HOH HOH . K 4 HOH C 37 537 151 HOH HOH . K 4 HOH C 38 538 117 HOH HOH . K 4 HOH C 39 539 84 HOH HOH . K 4 HOH C 40 540 118 HOH HOH . K 4 HOH C 41 541 158 HOH HOH . K 4 HOH C 42 542 78 HOH HOH . K 4 HOH C 43 543 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 4KT . . . H 2 -16.361 -10.374 -36.763 1 32.42 ? C14 4KT 401 C 1 HETATM 2 C C16 4KT . . . H 2 -17.054 -9.149 -36.935 1 32.9 ? C16 4KT 401 C 1 HETATM 3 C C17 4KT . . . H 2 -18.312 -9.064 -37.602 1 37.17 ? C17 4KT 401 C 1 HETATM 4 C C22 4KT . . . H 2 -19.494 -5.501 -38.794 1 43.07 ? C22 4KT 401 C 1 HETATM 5 C C21 4KT . . . H 2 -20.701 -6.103 -36.993 1 52.08 ? C21 4KT 401 C 1 HETATM 6 C C20 4KT . . . H 2 -18.972 -6.98 -38.952 1 45.32 ? C20 4KT 401 C 1 HETATM 7 C C19 4KT . . . H 2 -18.85 -10.295 -38.095 1 37.46 ? C19 4KT 401 C 1 HETATM 8 C C18 4KT . . . H 2 -18.143 -11.493 -37.917 1 33.08 ? C18 4KT 401 C 1 HETATM 9 C C3 4KT . . . H 2 -9.169 -10.075 -35.255 1 31.52 ? C3 4KT 401 C 1 HETATM 10 C C2 4KT . . . H 2 -10.058 -12.213 -35.699 1 29.01 ? C2 4KT 401 C 1 HETATM 11 C C4 4KT . . . H 2 -11.409 -11.776 -35.706 1 29.77 ? C4 4KT 401 C 1 HETATM 12 C C5 4KT . . . H 2 -10.483 -9.577 -35.235 1 28.36 ? C5 4KT 401 C 1 HETATM 13 C C11 4KT . . . H 2 -13.509 -14.94 -35.674 1 28.16 ? C11 4KT 401 C 1 HETATM 14 C C9 4KT . . . H 2 -14.886 -13.277 -36.564 1 29.22 ? C9 4KT 401 C 1 HETATM 15 C C8 4KT . . . H 2 -12.544 -12.73 -35.905 1 32.04 ? C8 4KT 401 C 1 HETATM 16 C C24 4KT . . . H 2 -20.778 -11.563 -38.877 1 34.47 ? C24 4KT 401 C 1 HETATM 17 C C6 4KT . . . H 2 -11.619 -10.37 -35.44 1 30.54 ? C6 4KT 401 C 1 HETATM 18 C C1 4KT . . . H 2 -8.896 -11.436 -35.495 1 29.88 ? C1 4KT 401 C 1 HETATM 19 C C7 4KT . . . H 2 -13.792 -12.362 -36.418 1 30.47 ? C7 4KT 401 C 1 HETATM 20 N N1 4KT . . . H 2 -14.701 -14.578 -36.183 1 28.55 ? N1 4KT 401 C 1 HETATM 21 C C10 4KT . . . H 2 -12.429 -14.07 -35.521 1 33.69 ? C10 4KT 401 C 1 HETATM 22 C C12 4KT . . . H 2 -7.573 -11.98 -35.52 1 28.11 ? C12 4KT 401 C 1 HETATM 23 O O1 4KT . . . H 2 -12.903 -9.789 -35.396 1 32.26 ? O1 4KT 401 C 1 HETATM 24 C C13 4KT . . . H 2 -13.116 -8.433 -35 1 27.45 ? C13 4KT 401 C 1 HETATM 25 C C15 4KT . . . H 2 -16.895 -11.609 -37.259 1 31.25 ? C15 4KT 401 C 1 HETATM 26 O O2 4KT . . . H 2 -20.081 -10.31 -38.762 1 36.41 ? O2 4KT 401 C 1 HETATM 27 N N2 4KT . . . H 2 -19.004 -7.811 -37.751 1 40.99 ? N2 4KT 401 C 1 HETATM 28 O O3 4KT . . . H 2 -19.702 -5.184 -37.436 1 49.22 ? O3 4KT 401 C 1 HETATM 29 C C23 4KT . . . H 2 -20.226 -7.586 -36.995 1 41.59 ? C23 4KT 401 C 1 HETATM 30 N N3 4KT . . . H 2 -16.182 -12.902 -37.103 1 33.19 ? N3 4KT 401 C 1 HETATM 31 N N4 4KT . . . H 2 -6.505 -12.428 -35.543 1 31.82 ? N4 4KT 401 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #