data_5AZB # _model_server_result.job_id moHnNgfueqopusRWZcfSgQ _model_server_result.datetime_utc '2024-11-07 07:37:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5azb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5AZB # _exptl.entry_id 5AZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5AZB _cell.length_a 50.413 _cell.length_b 60.973 _cell.length_c 117.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 424 n n C1 O2 PLM doub 425 n n C1 C2 PLM sing 426 n n O1 H PLM sing 427 n n C2 C3 PLM sing 428 n n C2 H21 PLM sing 429 n n C2 H22 PLM sing 430 n n C3 C4 PLM sing 431 n n C3 H31 PLM sing 432 n n C3 H32 PLM sing 433 n n C4 C5 PLM sing 434 n n C4 H41 PLM sing 435 n n C4 H42 PLM sing 436 n n C5 C6 PLM sing 437 n n C5 H51 PLM sing 438 n n C5 H52 PLM sing 439 n n C6 C7 PLM sing 440 n n C6 H61 PLM sing 441 n n C6 H62 PLM sing 442 n n C7 C8 PLM sing 443 n n C7 H71 PLM sing 444 n n C7 H72 PLM sing 445 n n C8 C9 PLM sing 446 n n C8 H81 PLM sing 447 n n C8 H82 PLM sing 448 n n C9 CA PLM sing 449 n n C9 H91 PLM sing 450 n n C9 H92 PLM sing 451 n n CA CB PLM sing 452 n n CA HA1 PLM sing 453 n n CA HA2 PLM sing 454 n n CB CC PLM sing 455 n n CB HB1 PLM sing 456 n n CB HB2 PLM sing 457 n n CC CD PLM sing 458 n n CC HC1 PLM sing 459 n n CC HC2 PLM sing 460 n n CD CE PLM sing 461 n n CD HD1 PLM sing 462 n n CD HD2 PLM sing 463 n n CE CF PLM sing 464 n n CE HE1 PLM sing 465 n n CE HE2 PLM sing 466 n n CF CG PLM sing 467 n n CF HF1 PLM sing 468 n n CF HF2 PLM sing 469 n n CG HG1 PLM sing 470 n n CG HG2 PLM sing 471 n n CG HG3 PLM sing 472 n n # _atom_sites.entry_id 5AZB _atom_sites.fract_transf_matrix[1][1] 0.019836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016401 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 301 299 PLM PLM . C 2 PLM A 1 302 300 PLM PLM . D 3 BOG A 1 303 301 BOG BOG . E 4 PGT A 1 304 302 PGT PGT . F 4 PGT A 1 305 303 PGT PGT . G 4 PGT A 1 306 304 PGT PGT . H 4 PGT A 1 307 305 PGT PGT . I 4 PGT A 1 308 306 PGT PGT . J 4 PGT A 1 309 307 PGT PGT . K 4 PGT A 1 310 308 PGT PGT . L 4 PGT A 1 311 309 PGT PGT . M 4 PGT A 1 312 310 PGT PGT . N 5 HOH A 1 401 514 HOH HOH . N 5 HOH A 2 402 555 HOH HOH . N 5 HOH A 3 403 546 HOH HOH . N 5 HOH A 4 404 536 HOH HOH . N 5 HOH A 5 405 543 HOH HOH . N 5 HOH A 6 406 572 HOH HOH . N 5 HOH A 7 407 544 HOH HOH . N 5 HOH A 8 408 557 HOH HOH . N 5 HOH A 9 409 583 HOH HOH . N 5 HOH A 10 410 554 HOH HOH . N 5 HOH A 11 411 585 HOH HOH . N 5 HOH A 12 412 584 HOH HOH . N 5 HOH A 13 413 567 HOH HOH . N 5 HOH A 14 414 504 HOH HOH . N 5 HOH A 15 415 586 HOH HOH . N 5 HOH A 16 416 525 HOH HOH . N 5 HOH A 17 417 523 HOH HOH . N 5 HOH A 18 418 552 HOH HOH . N 5 HOH A 19 419 534 HOH HOH . N 5 HOH A 20 420 594 HOH HOH . N 5 HOH A 21 421 539 HOH HOH . N 5 HOH A 22 422 561 HOH HOH . N 5 HOH A 23 423 547 HOH HOH . N 5 HOH A 24 424 573 HOH HOH . N 5 HOH A 25 425 517 HOH HOH . N 5 HOH A 26 426 571 HOH HOH . N 5 HOH A 27 427 590 HOH HOH . N 5 HOH A 28 428 527 HOH HOH . N 5 HOH A 29 429 599 HOH HOH . N 5 HOH A 30 430 558 HOH HOH . N 5 HOH A 31 431 587 HOH HOH . N 5 HOH A 32 432 521 HOH HOH . N 5 HOH A 33 433 533 HOH HOH . N 5 HOH A 34 434 579 HOH HOH . N 5 HOH A 35 435 602 HOH HOH . N 5 HOH A 36 436 526 HOH HOH . N 5 HOH A 37 437 588 HOH HOH . N 5 HOH A 38 438 570 HOH HOH . N 5 HOH A 39 439 545 HOH HOH . N 5 HOH A 40 440 548 HOH HOH . N 5 HOH A 41 441 513 HOH HOH . N 5 HOH A 42 442 556 HOH HOH . N 5 HOH A 43 443 501 HOH HOH . N 5 HOH A 44 444 512 HOH HOH . N 5 HOH A 45 445 518 HOH HOH . N 5 HOH A 46 446 535 HOH HOH . N 5 HOH A 47 447 541 HOH HOH . N 5 HOH A 48 448 542 HOH HOH . N 5 HOH A 49 449 503 HOH HOH . N 5 HOH A 50 450 553 HOH HOH . N 5 HOH A 51 451 507 HOH HOH . N 5 HOH A 52 452 509 HOH HOH . N 5 HOH A 53 453 565 HOH HOH . N 5 HOH A 54 454 510 HOH HOH . N 5 HOH A 55 455 549 HOH HOH . N 5 HOH A 56 456 506 HOH HOH . N 5 HOH A 57 457 592 HOH HOH . N 5 HOH A 58 458 563 HOH HOH . N 5 HOH A 59 459 529 HOH HOH . N 5 HOH A 60 460 597 HOH HOH . N 5 HOH A 61 461 511 HOH HOH . N 5 HOH A 62 462 593 HOH HOH . N 5 HOH A 63 463 505 HOH HOH . N 5 HOH A 64 464 538 HOH HOH . N 5 HOH A 65 465 566 HOH HOH . N 5 HOH A 66 466 516 HOH HOH . N 5 HOH A 67 467 530 HOH HOH . N 5 HOH A 68 468 508 HOH HOH . N 5 HOH A 69 469 528 HOH HOH . N 5 HOH A 70 470 515 HOH HOH . N 5 HOH A 71 471 596 HOH HOH . N 5 HOH A 72 472 562 HOH HOH . N 5 HOH A 73 473 568 HOH HOH . N 5 HOH A 74 474 502 HOH HOH . N 5 HOH A 75 475 598 HOH HOH . N 5 HOH A 76 476 601 HOH HOH . N 5 HOH A 77 477 519 HOH HOH . N 5 HOH A 78 478 520 HOH HOH . N 5 HOH A 79 479 531 HOH HOH . N 5 HOH A 80 480 589 HOH HOH . N 5 HOH A 81 481 578 HOH HOH . N 5 HOH A 82 482 532 HOH HOH . N 5 HOH A 83 483 574 HOH HOH . N 5 HOH A 84 484 591 HOH HOH . N 5 HOH A 85 485 582 HOH HOH . N 5 HOH A 86 486 559 HOH HOH . N 5 HOH A 87 487 524 HOH HOH . N 5 HOH A 88 488 576 HOH HOH . N 5 HOH A 89 489 564 HOH HOH . N 5 HOH A 90 490 575 HOH HOH . N 5 HOH A 91 491 560 HOH HOH . N 5 HOH A 92 492 577 HOH HOH . N 5 HOH A 93 493 581 HOH HOH . N 5 HOH A 94 494 551 HOH HOH . N 5 HOH A 95 495 550 HOH HOH . N 5 HOH A 96 496 540 HOH HOH . N 5 HOH A 97 497 580 HOH HOH . N 5 HOH A 98 498 569 HOH HOH . N 5 HOH A 99 499 595 HOH HOH . N 5 HOH A 100 500 522 HOH HOH . N 5 HOH A 101 501 603 HOH HOH . N 5 HOH A 102 502 600 HOH HOH . N 5 HOH A 103 503 537 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 -20.43 -5.667 1.827 1 81.96 ? C1 PLM 301 A 1 HETATM 2 O O1 PLM . . . B 2 -19.796 -6.365 2.66 1 39.3 ? O1 PLM 301 A 1 HETATM 3 O O2 PLM . . . B 2 -20.368 -4.414 1.893 1 60.25 ? O2 PLM 301 A 1 HETATM 4 C C2 PLM . . . B 2 -21.248 -6.31 0.757 1 37.15 ? C2 PLM 301 A 1 HETATM 5 C C3 PLM . . . B 2 -20.63 -6.408 -0.596 1 41.14 ? C3 PLM 301 A 1 HETATM 6 C C4 PLM . . . B 2 -21.488 -6.86 -1.73 1 53.18 ? C4 PLM 301 A 1 HETATM 7 C C5 PLM . . . B 2 -22.22 -8.152 -1.589 1 38.85 ? C5 PLM 301 A 1 HETATM 8 C C6 PLM . . . B 2 -22.866 -8.711 -2.813 1 40.77 ? C6 PLM 301 A 1 HETATM 9 C C7 PLM . . . B 2 -24.307 -9.085 -2.744 1 50.07 ? C7 PLM 301 A 1 HETATM 10 C C8 PLM . . . B 2 -24.881 -9.83 -3.904 1 42.2 ? C8 PLM 301 A 1 HETATM 11 C C9 PLM . . . B 2 -26.364 -9.988 -3.959 1 58.8 ? C9 PLM 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #