data_5AZE # _model_server_result.job_id pY5MbNHnxg6jqFxiQNmtUw _model_server_result.datetime_utc '2025-03-06 20:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5aze # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5AZE # _exptl.entry_id 5AZE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5AZE _cell.length_a 45.47 _cell.length_b 79.86 _cell.length_c 116.25 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 22 1_555 A SG CYS 90 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 139 L CYS 139 1_555 A SG CYS 198 L CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 216 L CYS 216 1_555 B SG CYS 224 H CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 B SG CYS 148 H CYS 148 1_555 B SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 B C PCA 1 H PCA 1 1_555 B N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 B OD2 ASP 99 H ASP 99 1_555 C CA CA . H CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc2 B O ASP 100 H ASP 100 1_555 C CA CA . H CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc3 B O GLU 105 H GLU 105 1_555 C CA CA . H CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5AZE _atom_sites.fract_transf_matrix[1][1] 0.021993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA H 1 301 1 CA CA . D 4 HOH L 1 301 63 HOH HOH . D 4 HOH L 2 302 2 HOH HOH . D 4 HOH L 3 303 18 HOH HOH . D 4 HOH L 4 304 155 HOH HOH . D 4 HOH L 5 305 145 HOH HOH . D 4 HOH L 6 306 82 HOH HOH . D 4 HOH L 7 307 9 HOH HOH . D 4 HOH L 8 308 122 HOH HOH . D 4 HOH L 9 309 34 HOH HOH . D 4 HOH L 10 310 7 HOH HOH . D 4 HOH L 11 311 25 HOH HOH . D 4 HOH L 12 312 236 HOH HOH . D 4 HOH L 13 313 81 HOH HOH . D 4 HOH L 14 314 92 HOH HOH . D 4 HOH L 15 315 3 HOH HOH . D 4 HOH L 16 316 151 HOH HOH . D 4 HOH L 17 317 230 HOH HOH . D 4 HOH L 18 318 27 HOH HOH . D 4 HOH L 19 319 250 HOH HOH . D 4 HOH L 20 320 172 HOH HOH . D 4 HOH L 21 321 11 HOH HOH . D 4 HOH L 22 322 52 HOH HOH . D 4 HOH L 23 323 62 HOH HOH . D 4 HOH L 24 324 234 HOH HOH . D 4 HOH L 25 325 13 HOH HOH . D 4 HOH L 26 326 244 HOH HOH . D 4 HOH L 27 327 58 HOH HOH . D 4 HOH L 28 328 167 HOH HOH . D 4 HOH L 29 329 84 HOH HOH . D 4 HOH L 30 330 161 HOH HOH . D 4 HOH L 31 331 8 HOH HOH . D 4 HOH L 32 332 142 HOH HOH . D 4 HOH L 33 333 45 HOH HOH . D 4 HOH L 34 334 243 HOH HOH . D 4 HOH L 35 335 10 HOH HOH . D 4 HOH L 36 336 48 HOH HOH . D 4 HOH L 37 337 170 HOH HOH . D 4 HOH L 38 338 98 HOH HOH . D 4 HOH L 39 339 93 HOH HOH . D 4 HOH L 40 340 22 HOH HOH . D 4 HOH L 41 341 237 HOH HOH . D 4 HOH L 42 342 56 HOH HOH . D 4 HOH L 43 343 116 HOH HOH . D 4 HOH L 44 344 80 HOH HOH . D 4 HOH L 45 345 248 HOH HOH . D 4 HOH L 46 346 83 HOH HOH . D 4 HOH L 47 347 97 HOH HOH . D 4 HOH L 48 348 23 HOH HOH . D 4 HOH L 49 349 90 HOH HOH . D 4 HOH L 50 350 71 HOH HOH . D 4 HOH L 51 351 70 HOH HOH . D 4 HOH L 52 352 31 HOH HOH . D 4 HOH L 53 353 39 HOH HOH . D 4 HOH L 54 354 21 HOH HOH . D 4 HOH L 55 355 135 HOH HOH . D 4 HOH L 56 356 43 HOH HOH . D 4 HOH L 57 357 124 HOH HOH . D 4 HOH L 58 358 141 HOH HOH . D 4 HOH L 59 359 153 HOH HOH . D 4 HOH L 60 360 177 HOH HOH . D 4 HOH L 61 361 235 HOH HOH . D 4 HOH L 62 362 166 HOH HOH . D 4 HOH L 63 363 20 HOH HOH . D 4 HOH L 64 364 53 HOH HOH . D 4 HOH L 65 365 4 HOH HOH . D 4 HOH L 66 366 238 HOH HOH . D 4 HOH L 67 367 196 HOH HOH . D 4 HOH L 68 368 249 HOH HOH . D 4 HOH L 69 369 109 HOH HOH . D 4 HOH L 70 370 136 HOH HOH . D 4 HOH L 71 371 19 HOH HOH . D 4 HOH L 72 372 150 HOH HOH . D 4 HOH L 73 373 246 HOH HOH . D 4 HOH L 74 374 50 HOH HOH . D 4 HOH L 75 375 227 HOH HOH . D 4 HOH L 76 376 5 HOH HOH . D 4 HOH L 77 377 61 HOH HOH . D 4 HOH L 78 378 100 HOH HOH . D 4 HOH L 79 379 247 HOH HOH . D 4 HOH L 80 380 47 HOH HOH . D 4 HOH L 81 381 59 HOH HOH . D 4 HOH L 82 382 232 HOH HOH . D 4 HOH L 83 383 144 HOH HOH . D 4 HOH L 84 384 103 HOH HOH . D 4 HOH L 85 385 183 HOH HOH . D 4 HOH L 86 386 225 HOH HOH . D 4 HOH L 87 387 104 HOH HOH . D 4 HOH L 88 388 72 HOH HOH . D 4 HOH L 89 389 75 HOH HOH . D 4 HOH L 90 390 242 HOH HOH . D 4 HOH L 91 391 231 HOH HOH . D 4 HOH L 92 392 239 HOH HOH . D 4 HOH L 93 393 159 HOH HOH . D 4 HOH L 94 394 121 HOH HOH . D 4 HOH L 95 395 185 HOH HOH . D 4 HOH L 96 396 240 HOH HOH . D 4 HOH L 97 397 228 HOH HOH . D 4 HOH L 98 398 86 HOH HOH . D 4 HOH L 99 399 38 HOH HOH . D 4 HOH L 100 400 130 HOH HOH . D 4 HOH L 101 401 221 HOH HOH . D 4 HOH L 102 402 226 HOH HOH . D 4 HOH L 103 403 125 HOH HOH . D 4 HOH L 104 404 180 HOH HOH . D 4 HOH L 105 405 233 HOH HOH . D 4 HOH L 106 406 241 HOH HOH . D 4 HOH L 107 407 55 HOH HOH . D 4 HOH L 108 408 245 HOH HOH . D 4 HOH L 109 409 229 HOH HOH . D 4 HOH L 110 410 32 HOH HOH . D 4 HOH L 111 411 79 HOH HOH . E 4 HOH H 1 401 69 HOH HOH . E 4 HOH H 2 402 131 HOH HOH . E 4 HOH H 3 403 152 HOH HOH . E 4 HOH H 4 404 128 HOH HOH . E 4 HOH H 5 405 127 HOH HOH . E 4 HOH H 6 406 66 HOH HOH . E 4 HOH H 7 407 95 HOH HOH . E 4 HOH H 8 408 41 HOH HOH . E 4 HOH H 9 409 64 HOH HOH . E 4 HOH H 10 410 1 HOH HOH . E 4 HOH H 11 411 179 HOH HOH . E 4 HOH H 12 412 89 HOH HOH . E 4 HOH H 13 413 105 HOH HOH . E 4 HOH H 14 414 223 HOH HOH . E 4 HOH H 15 415 200 HOH HOH . E 4 HOH H 16 416 210 HOH HOH . E 4 HOH H 17 417 108 HOH HOH . E 4 HOH H 18 418 94 HOH HOH . E 4 HOH H 19 419 33 HOH HOH . E 4 HOH H 20 420 96 HOH HOH . E 4 HOH H 21 421 88 HOH HOH . E 4 HOH H 22 422 214 HOH HOH . E 4 HOH H 23 423 199 HOH HOH . E 4 HOH H 24 424 16 HOH HOH . E 4 HOH H 25 425 173 HOH HOH . E 4 HOH H 26 426 36 HOH HOH . E 4 HOH H 27 427 44 HOH HOH . E 4 HOH H 28 428 24 HOH HOH . E 4 HOH H 29 429 49 HOH HOH . E 4 HOH H 30 430 182 HOH HOH . E 4 HOH H 31 431 91 HOH HOH . E 4 HOH H 32 432 118 HOH HOH . E 4 HOH H 33 433 171 HOH HOH . E 4 HOH H 34 434 126 HOH HOH . E 4 HOH H 35 435 110 HOH HOH . E 4 HOH H 36 436 73 HOH HOH . E 4 HOH H 37 437 123 HOH HOH . E 4 HOH H 38 438 111 HOH HOH . E 4 HOH H 39 439 106 HOH HOH . E 4 HOH H 40 440 102 HOH HOH . E 4 HOH H 41 441 160 HOH HOH . E 4 HOH H 42 442 149 HOH HOH . E 4 HOH H 43 443 42 HOH HOH . E 4 HOH H 44 444 120 HOH HOH . E 4 HOH H 45 445 253 HOH HOH . E 4 HOH H 46 446 78 HOH HOH . E 4 HOH H 47 447 154 HOH HOH . E 4 HOH H 48 448 138 HOH HOH . E 4 HOH H 49 449 26 HOH HOH . E 4 HOH H 50 450 188 HOH HOH . E 4 HOH H 51 451 139 HOH HOH . E 4 HOH H 52 452 28 HOH HOH . E 4 HOH H 53 453 15 HOH HOH . E 4 HOH H 54 454 187 HOH HOH . E 4 HOH H 55 455 204 HOH HOH . E 4 HOH H 56 456 163 HOH HOH . E 4 HOH H 57 457 60 HOH HOH . E 4 HOH H 58 458 67 HOH HOH . E 4 HOH H 59 459 205 HOH HOH . E 4 HOH H 60 460 29 HOH HOH . E 4 HOH H 61 461 76 HOH HOH . E 4 HOH H 62 462 46 HOH HOH . E 4 HOH H 63 463 77 HOH HOH . E 4 HOH H 64 464 134 HOH HOH . E 4 HOH H 65 465 220 HOH HOH . E 4 HOH H 66 466 208 HOH HOH . E 4 HOH H 67 467 107 HOH HOH . E 4 HOH H 68 468 37 HOH HOH . E 4 HOH H 69 469 203 HOH HOH . E 4 HOH H 70 470 186 HOH HOH . E 4 HOH H 71 471 87 HOH HOH . E 4 HOH H 72 472 129 HOH HOH . E 4 HOH H 73 473 40 HOH HOH . E 4 HOH H 74 474 101 HOH HOH . E 4 HOH H 75 475 216 HOH HOH . E 4 HOH H 76 476 132 HOH HOH . E 4 HOH H 77 477 213 HOH HOH . E 4 HOH H 78 478 251 HOH HOH . E 4 HOH H 79 479 65 HOH HOH . E 4 HOH H 80 480 209 HOH HOH . E 4 HOH H 81 481 57 HOH HOH . E 4 HOH H 82 482 206 HOH HOH . E 4 HOH H 83 483 133 HOH HOH . E 4 HOH H 84 484 51 HOH HOH . E 4 HOH H 85 485 117 HOH HOH . E 4 HOH H 86 486 112 HOH HOH . E 4 HOH H 87 487 35 HOH HOH . E 4 HOH H 88 488 74 HOH HOH . E 4 HOH H 89 489 165 HOH HOH . E 4 HOH H 90 490 219 HOH HOH . E 4 HOH H 91 491 54 HOH HOH . E 4 HOH H 92 492 218 HOH HOH . E 4 HOH H 93 493 215 HOH HOH . E 4 HOH H 94 494 201 HOH HOH . E 4 HOH H 95 495 175 HOH HOH . E 4 HOH H 96 496 212 HOH HOH . E 4 HOH H 97 497 252 HOH HOH . E 4 HOH H 98 498 14 HOH HOH . E 4 HOH H 99 499 30 HOH HOH . E 4 HOH H 100 500 207 HOH HOH . E 4 HOH H 101 501 202 HOH HOH . E 4 HOH H 102 502 115 HOH HOH . E 4 HOH H 103 503 146 HOH HOH . E 4 HOH H 104 504 174 HOH HOH . E 4 HOH H 105 505 6 HOH HOH . E 4 HOH H 106 506 119 HOH HOH . E 4 HOH H 107 507 222 HOH HOH . E 4 HOH H 108 508 157 HOH HOH . E 4 HOH H 109 509 181 HOH HOH . E 4 HOH H 110 510 178 HOH HOH . E 4 HOH H 111 511 198 HOH HOH . E 4 HOH H 112 512 137 HOH HOH . E 4 HOH H 113 513 176 HOH HOH . E 4 HOH H 114 514 147 HOH HOH . E 4 HOH H 115 515 113 HOH HOH . E 4 HOH H 116 516 164 HOH HOH . E 4 HOH H 117 517 190 HOH HOH . E 4 HOH H 118 518 140 HOH HOH . E 4 HOH H 119 519 168 HOH HOH . E 4 HOH H 120 520 193 HOH HOH . E 4 HOH H 121 521 224 HOH HOH . E 4 HOH H 122 522 68 HOH HOH . E 4 HOH H 123 523 99 HOH HOH . E 4 HOH H 124 524 85 HOH HOH . E 4 HOH H 125 525 162 HOH HOH . E 4 HOH H 126 526 217 HOH HOH . E 4 HOH H 127 527 211 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 41.695 _atom_site.Cartn_y 117.728 _atom_site.Cartn_z 47.82 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #