data_5B2N # _model_server_result.job_id 2hXtJKpxL6UX24kXXs7sSw _model_server_result.datetime_utc '2024-11-14 17:45:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b2n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5B2N # _exptl.entry_id 5B2N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 86.175 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 130.4 _cell.angle_gamma 90 _cell.entry_id 5B2N _cell.length_a 101.58 _cell.length_b 49.79 _cell.length_c 75.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B2N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 242 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 235 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.275 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H14' _chem_comp.formula_weight 86.175 _chem_comp.id HEX _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 HEX sing 197 n n C1 H11 HEX sing 198 n n C1 H12 HEX sing 199 n n C1 H13 HEX sing 200 n n C2 C3 HEX sing 201 n n C2 H21 HEX sing 202 n n C2 H22 HEX sing 203 n n C3 C4 HEX sing 204 n n C3 H31 HEX sing 205 n n C3 H32 HEX sing 206 n n C4 C5 HEX sing 207 n n C4 H41 HEX sing 208 n n C4 H42 HEX sing 209 n n C5 C6 HEX sing 210 n n C5 H51 HEX sing 211 n n C5 H52 HEX sing 212 n n C6 H61 HEX sing 213 n n C6 H62 HEX sing 214 n n C6 H63 HEX sing 215 n n # _atom_sites.entry_id 5B2N _atom_sites.fract_transf_matrix[1][1] 0.009844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008378 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017434 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 1 RET RET . C 3 CL A 1 302 1 CL CL . D 4 HEX A 1 303 1 HEX HEX . E 4 HEX A 1 304 2 HEX HEX . F 5 OCT A 1 305 1 OCT OCT . G 5 OCT A 1 306 2 OCT OCT . H 5 OCT A 1 307 3 OCT OCT . I 5 OCT A 1 308 4 OCT OCT . J 6 D12 A 1 309 1 D12 D12 . K 6 D12 A 1 310 2 D12 D12 . L 6 D12 A 1 311 3 D12 D12 . M 7 D10 A 1 312 1 D10 D10 . N 7 D10 A 1 313 2 D10 D10 . O 7 D10 A 1 314 3 D10 D10 . P 8 HOH A 1 401 528 HOH HOH . P 8 HOH A 2 402 530 HOH HOH . P 8 HOH A 3 403 419 HOH HOH . P 8 HOH A 4 404 523 HOH HOH . P 8 HOH A 5 405 405 HOH HOH . P 8 HOH A 6 406 428 HOH HOH . P 8 HOH A 7 407 431 HOH HOH . P 8 HOH A 8 408 452 HOH HOH . P 8 HOH A 9 409 456 HOH HOH . P 8 HOH A 10 410 506 HOH HOH . P 8 HOH A 11 411 518 HOH HOH . P 8 HOH A 12 412 441 HOH HOH . P 8 HOH A 13 413 406 HOH HOH . P 8 HOH A 14 414 503 HOH HOH . P 8 HOH A 15 415 416 HOH HOH . P 8 HOH A 16 416 501 HOH HOH . P 8 HOH A 17 417 507 HOH HOH . P 8 HOH A 18 418 411 HOH HOH . P 8 HOH A 19 419 404 HOH HOH . P 8 HOH A 20 420 512 HOH HOH . P 8 HOH A 21 421 439 HOH HOH . P 8 HOH A 22 422 417 HOH HOH . P 8 HOH A 23 423 504 HOH HOH . P 8 HOH A 24 424 438 HOH HOH . P 8 HOH A 25 425 502 HOH HOH . P 8 HOH A 26 426 447 HOH HOH . P 8 HOH A 27 427 508 HOH HOH . P 8 HOH A 28 428 443 HOH HOH . P 8 HOH A 29 429 533 HOH HOH . P 8 HOH A 30 430 435 HOH HOH . P 8 HOH A 31 431 527 HOH HOH . P 8 HOH A 32 432 407 HOH HOH . P 8 HOH A 33 433 408 HOH HOH . P 8 HOH A 34 434 401 HOH HOH . P 8 HOH A 35 435 450 HOH HOH . P 8 HOH A 36 436 402 HOH HOH . P 8 HOH A 37 437 429 HOH HOH . P 8 HOH A 38 438 410 HOH HOH . P 8 HOH A 39 439 445 HOH HOH . P 8 HOH A 40 440 422 HOH HOH . P 8 HOH A 41 441 510 HOH HOH . P 8 HOH A 42 442 522 HOH HOH . P 8 HOH A 43 443 536 HOH HOH . P 8 HOH A 44 444 427 HOH HOH . P 8 HOH A 45 445 451 HOH HOH . P 8 HOH A 46 446 413 HOH HOH . P 8 HOH A 47 447 535 HOH HOH . P 8 HOH A 48 448 403 HOH HOH . P 8 HOH A 49 449 511 HOH HOH . P 8 HOH A 50 450 425 HOH HOH . P 8 HOH A 51 451 434 HOH HOH . P 8 HOH A 52 452 525 HOH HOH . P 8 HOH A 53 453 534 HOH HOH . P 8 HOH A 54 454 436 HOH HOH . P 8 HOH A 55 455 529 HOH HOH . P 8 HOH A 56 456 538 HOH HOH . P 8 HOH A 57 457 514 HOH HOH . P 8 HOH A 58 458 513 HOH HOH . P 8 HOH A 59 459 420 HOH HOH . P 8 HOH A 60 460 432 HOH HOH . P 8 HOH A 61 461 516 HOH HOH . P 8 HOH A 62 462 437 HOH HOH . P 8 HOH A 63 463 414 HOH HOH . P 8 HOH A 64 464 423 HOH HOH . P 8 HOH A 65 465 430 HOH HOH . P 8 HOH A 66 466 524 HOH HOH . P 8 HOH A 67 467 519 HOH HOH . P 8 HOH A 68 468 442 HOH HOH . P 8 HOH A 69 469 520 HOH HOH . P 8 HOH A 70 470 515 HOH HOH . P 8 HOH A 71 471 505 HOH HOH . P 8 HOH A 72 472 421 HOH HOH . P 8 HOH A 73 473 440 HOH HOH . P 8 HOH A 74 474 412 HOH HOH . P 8 HOH A 75 475 424 HOH HOH . P 8 HOH A 76 476 509 HOH HOH . P 8 HOH A 77 477 517 HOH HOH . P 8 HOH A 78 478 531 HOH HOH . P 8 HOH A 79 479 409 HOH HOH . P 8 HOH A 80 480 532 HOH HOH . P 8 HOH A 81 481 446 HOH HOH . P 8 HOH A 82 482 426 HOH HOH . P 8 HOH A 83 483 433 HOH HOH . P 8 HOH A 84 484 418 HOH HOH . P 8 HOH A 85 485 449 HOH HOH . P 8 HOH A 86 486 521 HOH HOH . P 8 HOH A 87 487 537 HOH HOH . P 8 HOH A 88 488 415 HOH HOH . P 8 HOH A 89 489 453 HOH HOH . P 8 HOH A 90 490 454 HOH HOH . P 8 HOH A 91 491 444 HOH HOH . P 8 HOH A 92 492 526 HOH HOH . P 8 HOH A 93 493 448 HOH HOH . P 8 HOH A 94 494 455 HOH HOH . P 8 HOH A 95 495 540 HOH HOH . P 8 HOH A 96 496 539 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HEX . . . D 4 21.297 8.641 6.393 1 49.77 ? C1 HEX 303 A 1 HETATM 2 C C2 HEX . . . D 4 22.044 8.265 7.653 1 49.5 ? C2 HEX 303 A 1 HETATM 3 C C3 HEX . . . D 4 21.203 7.312 8.476 1 48.9 ? C3 HEX 303 A 1 HETATM 4 C C4 HEX . . . D 4 21.959 6.939 9.732 1 47.61 ? C4 HEX 303 A 1 HETATM 5 C C5 HEX . . . D 4 21.187 5.89 10.501 1 46.8 ? C5 HEX 303 A 1 HETATM 6 C C6 HEX . . . D 4 21.721 5.82 11.916 1 46.41 ? C6 HEX 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #