data_5B3T # _model_server_result.job_id Qrc2rs3WIAdg3QwlxJ0idg _model_server_result.datetime_utc '2024-11-05 01:57:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b3t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5B3T # _exptl.entry_id 5B3T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5B3T _cell.length_a 58.248 _cell.length_b 88.497 _cell.length_c 133.582 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B3T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 5B3T _atom_sites.fract_transf_matrix[1][1] 0.017168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0113 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007486 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 401 2 PO4 PO4 . D 2 PO4 A 1 402 3 PO4 PO4 . E 2 PO4 A 1 403 4 PO4 PO4 . F 2 PO4 B 1 401 1 PO4 PO4 . G 3 HOH A 1 501 210 HOH HOH . G 3 HOH A 2 502 136 HOH HOH . G 3 HOH A 3 503 107 HOH HOH . G 3 HOH A 4 504 241 HOH HOH . G 3 HOH A 5 505 66 HOH HOH . G 3 HOH A 6 506 197 HOH HOH . G 3 HOH A 7 507 270 HOH HOH . G 3 HOH A 8 508 206 HOH HOH . G 3 HOH A 9 509 259 HOH HOH . G 3 HOH A 10 510 224 HOH HOH . G 3 HOH A 11 511 12 HOH HOH . G 3 HOH A 12 512 14 HOH HOH . G 3 HOH A 13 513 217 HOH HOH . G 3 HOH A 14 514 8 HOH HOH . G 3 HOH A 15 515 137 HOH HOH . G 3 HOH A 16 516 64 HOH HOH . G 3 HOH A 17 517 167 HOH HOH . G 3 HOH A 18 518 30 HOH HOH . G 3 HOH A 19 519 77 HOH HOH . G 3 HOH A 20 520 80 HOH HOH . G 3 HOH A 21 521 10 HOH HOH . G 3 HOH A 22 522 142 HOH HOH . G 3 HOH A 23 523 116 HOH HOH . G 3 HOH A 24 524 113 HOH HOH . G 3 HOH A 25 525 58 HOH HOH . G 3 HOH A 26 526 42 HOH HOH . G 3 HOH A 27 527 234 HOH HOH . G 3 HOH A 28 528 195 HOH HOH . G 3 HOH A 29 529 204 HOH HOH . G 3 HOH A 30 530 207 HOH HOH . G 3 HOH A 31 531 25 HOH HOH . G 3 HOH A 32 532 89 HOH HOH . G 3 HOH A 33 533 86 HOH HOH . G 3 HOH A 34 534 13 HOH HOH . G 3 HOH A 35 535 186 HOH HOH . G 3 HOH A 36 536 227 HOH HOH . G 3 HOH A 37 537 63 HOH HOH . G 3 HOH A 38 538 268 HOH HOH . G 3 HOH A 39 539 92 HOH HOH . G 3 HOH A 40 540 55 HOH HOH . G 3 HOH A 41 541 279 HOH HOH . G 3 HOH A 42 542 7 HOH HOH . G 3 HOH A 43 543 21 HOH HOH . G 3 HOH A 44 544 44 HOH HOH . G 3 HOH A 45 545 134 HOH HOH . G 3 HOH A 46 546 190 HOH HOH . G 3 HOH A 47 547 54 HOH HOH . G 3 HOH A 48 548 68 HOH HOH . G 3 HOH A 49 549 124 HOH HOH . G 3 HOH A 50 550 17 HOH HOH . G 3 HOH A 51 551 119 HOH HOH . G 3 HOH A 52 552 98 HOH HOH . G 3 HOH A 53 553 94 HOH HOH . G 3 HOH A 54 554 3 HOH HOH . G 3 HOH A 55 555 95 HOH HOH . G 3 HOH A 56 556 67 HOH HOH . G 3 HOH A 57 557 170 HOH HOH . G 3 HOH A 58 558 133 HOH HOH . G 3 HOH A 59 559 126 HOH HOH . G 3 HOH A 60 560 110 HOH HOH . G 3 HOH A 61 561 101 HOH HOH . G 3 HOH A 62 562 88 HOH HOH . G 3 HOH A 63 563 157 HOH HOH . G 3 HOH A 64 564 19 HOH HOH . G 3 HOH A 65 565 20 HOH HOH . G 3 HOH A 66 566 100 HOH HOH . G 3 HOH A 67 567 177 HOH HOH . G 3 HOH A 68 568 57 HOH HOH . G 3 HOH A 69 569 273 HOH HOH . G 3 HOH A 70 570 59 HOH HOH . G 3 HOH A 71 571 103 HOH HOH . G 3 HOH A 72 572 108 HOH HOH . G 3 HOH A 73 573 4 HOH HOH . G 3 HOH A 74 574 72 HOH HOH . G 3 HOH A 75 575 5 HOH HOH . G 3 HOH A 76 576 248 HOH HOH . G 3 HOH A 77 577 132 HOH HOH . G 3 HOH A 78 578 15 HOH HOH . G 3 HOH A 79 579 162 HOH HOH . G 3 HOH A 80 580 106 HOH HOH . G 3 HOH A 81 581 2 HOH HOH . G 3 HOH A 82 582 235 HOH HOH . G 3 HOH A 83 583 261 HOH HOH . G 3 HOH A 84 584 29 HOH HOH . G 3 HOH A 85 585 276 HOH HOH . G 3 HOH A 86 586 41 HOH HOH . G 3 HOH A 87 587 209 HOH HOH . G 3 HOH A 88 588 208 HOH HOH . G 3 HOH A 89 589 93 HOH HOH . G 3 HOH A 90 590 221 HOH HOH . G 3 HOH A 91 591 214 HOH HOH . G 3 HOH A 92 592 40 HOH HOH . G 3 HOH A 93 593 213 HOH HOH . G 3 HOH A 94 594 146 HOH HOH . G 3 HOH A 95 595 191 HOH HOH . G 3 HOH A 96 596 11 HOH HOH . G 3 HOH A 97 597 75 HOH HOH . G 3 HOH A 98 598 135 HOH HOH . G 3 HOH A 99 599 179 HOH HOH . G 3 HOH A 100 600 24 HOH HOH . G 3 HOH A 101 601 122 HOH HOH . G 3 HOH A 102 602 129 HOH HOH . G 3 HOH A 103 603 70 HOH HOH . G 3 HOH A 104 604 45 HOH HOH . G 3 HOH A 105 605 37 HOH HOH . G 3 HOH A 106 606 236 HOH HOH . G 3 HOH A 107 607 53 HOH HOH . G 3 HOH A 108 608 196 HOH HOH . G 3 HOH A 109 609 49 HOH HOH . G 3 HOH A 110 610 65 HOH HOH . G 3 HOH A 111 611 117 HOH HOH . G 3 HOH A 112 612 232 HOH HOH . G 3 HOH A 113 613 130 HOH HOH . G 3 HOH A 114 614 265 HOH HOH . G 3 HOH A 115 615 163 HOH HOH . G 3 HOH A 116 616 26 HOH HOH . G 3 HOH A 117 617 115 HOH HOH . G 3 HOH A 118 618 152 HOH HOH . G 3 HOH A 119 619 220 HOH HOH . G 3 HOH A 120 620 205 HOH HOH . G 3 HOH A 121 621 83 HOH HOH . G 3 HOH A 122 622 198 HOH HOH . G 3 HOH A 123 623 192 HOH HOH . G 3 HOH A 124 624 125 HOH HOH . G 3 HOH A 125 625 34 HOH HOH . G 3 HOH A 126 626 215 HOH HOH . G 3 HOH A 127 627 201 HOH HOH . G 3 HOH A 128 628 281 HOH HOH . G 3 HOH A 129 629 174 HOH HOH . G 3 HOH A 130 630 176 HOH HOH . G 3 HOH A 131 631 114 HOH HOH . G 3 HOH A 132 632 183 HOH HOH . G 3 HOH A 133 633 123 HOH HOH . G 3 HOH A 134 634 246 HOH HOH . G 3 HOH A 135 635 274 HOH HOH . G 3 HOH A 136 636 16 HOH HOH . G 3 HOH A 137 637 252 HOH HOH . G 3 HOH A 138 638 247 HOH HOH . G 3 HOH A 139 639 150 HOH HOH . G 3 HOH A 140 640 216 HOH HOH . G 3 HOH A 141 641 97 HOH HOH . G 3 HOH A 142 642 169 HOH HOH . G 3 HOH A 143 643 211 HOH HOH . G 3 HOH A 144 644 121 HOH HOH . G 3 HOH A 145 645 69 HOH HOH . G 3 HOH A 146 646 267 HOH HOH . G 3 HOH A 147 647 237 HOH HOH . G 3 HOH A 148 648 194 HOH HOH . G 3 HOH A 149 649 71 HOH HOH . G 3 HOH A 150 650 219 HOH HOH . G 3 HOH A 151 651 239 HOH HOH . G 3 HOH A 152 652 199 HOH HOH . G 3 HOH A 153 653 138 HOH HOH . G 3 HOH A 154 654 262 HOH HOH . G 3 HOH A 155 655 62 HOH HOH . G 3 HOH A 156 656 178 HOH HOH . G 3 HOH A 157 657 266 HOH HOH . H 3 HOH B 1 501 1 HOH HOH . H 3 HOH B 2 502 32 HOH HOH . H 3 HOH B 3 503 185 HOH HOH . H 3 HOH B 4 504 73 HOH HOH . H 3 HOH B 5 505 251 HOH HOH . H 3 HOH B 6 506 145 HOH HOH . H 3 HOH B 7 507 128 HOH HOH . H 3 HOH B 8 508 78 HOH HOH . H 3 HOH B 9 509 154 HOH HOH . H 3 HOH B 10 510 260 HOH HOH . H 3 HOH B 11 511 253 HOH HOH . H 3 HOH B 12 512 96 HOH HOH . H 3 HOH B 13 513 225 HOH HOH . H 3 HOH B 14 514 175 HOH HOH . H 3 HOH B 15 515 172 HOH HOH . H 3 HOH B 16 516 74 HOH HOH . H 3 HOH B 17 517 173 HOH HOH . H 3 HOH B 18 518 140 HOH HOH . H 3 HOH B 19 519 153 HOH HOH . H 3 HOH B 20 520 31 HOH HOH . H 3 HOH B 21 521 158 HOH HOH . H 3 HOH B 22 522 48 HOH HOH . H 3 HOH B 23 523 156 HOH HOH . H 3 HOH B 24 524 249 HOH HOH . H 3 HOH B 25 525 102 HOH HOH . H 3 HOH B 26 526 50 HOH HOH . H 3 HOH B 27 527 23 HOH HOH . H 3 HOH B 28 528 240 HOH HOH . H 3 HOH B 29 529 39 HOH HOH . H 3 HOH B 30 530 99 HOH HOH . H 3 HOH B 31 531 277 HOH HOH . H 3 HOH B 32 532 120 HOH HOH . H 3 HOH B 33 533 151 HOH HOH . H 3 HOH B 34 534 27 HOH HOH . H 3 HOH B 35 535 22 HOH HOH . H 3 HOH B 36 536 280 HOH HOH . H 3 HOH B 37 537 165 HOH HOH . H 3 HOH B 38 538 43 HOH HOH . H 3 HOH B 39 539 6 HOH HOH . H 3 HOH B 40 540 243 HOH HOH . H 3 HOH B 41 541 166 HOH HOH . H 3 HOH B 42 542 81 HOH HOH . H 3 HOH B 43 543 87 HOH HOH . H 3 HOH B 44 544 275 HOH HOH . H 3 HOH B 45 545 161 HOH HOH . H 3 HOH B 46 546 91 HOH HOH . H 3 HOH B 47 547 52 HOH HOH . H 3 HOH B 48 548 18 HOH HOH . H 3 HOH B 49 549 212 HOH HOH . H 3 HOH B 50 550 228 HOH HOH . H 3 HOH B 51 551 203 HOH HOH . H 3 HOH B 52 552 233 HOH HOH . H 3 HOH B 53 553 84 HOH HOH . H 3 HOH B 54 554 46 HOH HOH . H 3 HOH B 55 555 269 HOH HOH . H 3 HOH B 56 556 256 HOH HOH . H 3 HOH B 57 557 155 HOH HOH . H 3 HOH B 58 558 223 HOH HOH . H 3 HOH B 59 559 164 HOH HOH . H 3 HOH B 60 560 188 HOH HOH . H 3 HOH B 61 561 76 HOH HOH . H 3 HOH B 62 562 35 HOH HOH . H 3 HOH B 63 563 28 HOH HOH . H 3 HOH B 64 564 131 HOH HOH . H 3 HOH B 65 565 60 HOH HOH . H 3 HOH B 66 566 184 HOH HOH . H 3 HOH B 67 567 226 HOH HOH . H 3 HOH B 68 568 182 HOH HOH . H 3 HOH B 69 569 127 HOH HOH . H 3 HOH B 70 570 36 HOH HOH . H 3 HOH B 71 571 222 HOH HOH . H 3 HOH B 72 572 9 HOH HOH . H 3 HOH B 73 573 147 HOH HOH . H 3 HOH B 74 574 85 HOH HOH . H 3 HOH B 75 575 33 HOH HOH . H 3 HOH B 76 576 278 HOH HOH . H 3 HOH B 77 577 160 HOH HOH . H 3 HOH B 78 578 109 HOH HOH . H 3 HOH B 79 579 38 HOH HOH . H 3 HOH B 80 580 82 HOH HOH . H 3 HOH B 81 581 244 HOH HOH . H 3 HOH B 82 582 90 HOH HOH . H 3 HOH B 83 583 149 HOH HOH . H 3 HOH B 84 584 272 HOH HOH . H 3 HOH B 85 585 51 HOH HOH . H 3 HOH B 86 586 245 HOH HOH . H 3 HOH B 87 587 111 HOH HOH . H 3 HOH B 88 588 231 HOH HOH . H 3 HOH B 89 589 257 HOH HOH . H 3 HOH B 90 590 181 HOH HOH . H 3 HOH B 91 591 255 HOH HOH . H 3 HOH B 92 592 159 HOH HOH . H 3 HOH B 93 593 79 HOH HOH . H 3 HOH B 94 594 104 HOH HOH . H 3 HOH B 95 595 242 HOH HOH . H 3 HOH B 96 596 148 HOH HOH . H 3 HOH B 97 597 61 HOH HOH . H 3 HOH B 98 598 141 HOH HOH . H 3 HOH B 99 599 171 HOH HOH . H 3 HOH B 100 600 263 HOH HOH . H 3 HOH B 101 601 105 HOH HOH . H 3 HOH B 102 602 254 HOH HOH . H 3 HOH B 103 603 250 HOH HOH . H 3 HOH B 104 604 139 HOH HOH . H 3 HOH B 105 605 229 HOH HOH . H 3 HOH B 106 606 258 HOH HOH . H 3 HOH B 107 607 271 HOH HOH . H 3 HOH B 108 608 264 HOH HOH . H 3 HOH B 109 609 118 HOH HOH . H 3 HOH B 110 610 168 HOH HOH . H 3 HOH B 111 611 56 HOH HOH . H 3 HOH B 112 612 112 HOH HOH . H 3 HOH B 113 613 180 HOH HOH . H 3 HOH B 114 614 202 HOH HOH . H 3 HOH B 115 615 230 HOH HOH . H 3 HOH B 116 616 238 HOH HOH . H 3 HOH B 117 617 189 HOH HOH . H 3 HOH B 118 618 193 HOH HOH . H 3 HOH B 119 619 187 HOH HOH . H 3 HOH B 120 620 218 HOH HOH . H 3 HOH B 121 621 200 HOH HOH . H 3 HOH B 122 622 144 HOH HOH . H 3 HOH B 123 623 143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 8.661 49.525 39.405 1 37.89 ? P PO4 402 A 1 HETATM 2 O O1 PO4 . . . D 2 8.191 48.704 38.227 1 35.29 ? O1 PO4 402 A 1 HETATM 3 O O2 PO4 . . . D 2 8.852 50.959 38.971 1 34.29 ? O2 PO4 402 A 1 HETATM 4 O O3 PO4 . . . D 2 9.97 48.972 39.914 1 40.55 ? O3 PO4 402 A 1 HETATM 5 O O4 PO4 . . . D 2 7.628 49.466 40.505 1 35.45 ? O4 PO4 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #