data_5B4E # _model_server_result.job_id dHOhvTJvWT-qsys9oZvI2g _model_server_result.datetime_utc '2025-03-09 05:51:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":410}' # _entry.id 5B4E # _exptl.entry_id 5B4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5B4E _cell.length_a 92.911 _cell.length_b 92.911 _cell.length_c 266.854 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 44.475667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 3 A CYS 3 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc2 A SG CYS 6 A CYS 6 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc3 A SG CYS 22 A CYS 22 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 A ND1 HIS 25 A HIS 25 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc5 A SG CYS 130 A CYS 130 1_555 E FE2 SF4 . A SF4 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 A SG CYS 133 A CYS 133 1_555 E FE4 SF4 . A SF4 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc7 A SG CYS 222 A CYS 222 1_555 E FE1 SF4 . A SF4 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc8 A SG CYS 274 A CYS 274 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc9 A SG CYS 277 A CYS 277 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc10 A SG CYS 286 A CYS 286 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc11 A SG CYS 289 A CYS 289 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 363 n n S O2 SO4 doub 364 n n S O3 SO4 sing 365 n n S O4 SO4 sing 366 n n # _atom_sites.entry_id 5B4E _atom_sites.fract_transf_matrix[1][1] 0.010763 _atom_sites.fract_transf_matrix[1][2] 0.006214 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012428 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003747 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 2 ZN A 1 402 2 ZN ZN . D 3 ANP A 1 403 1 ANP ANP . E 4 SF4 A 1 404 1 SF4 SF4 . F 5 SO4 A 1 405 1 SO4 SO4 . G 5 SO4 A 1 406 2 SO4 SO4 . H 5 SO4 A 1 407 3 SO4 SO4 . I 5 SO4 A 1 408 5 SO4 SO4 . J 5 SO4 A 1 409 6 SO4 SO4 . K 5 SO4 A 1 410 7 SO4 SO4 . L 6 IPA A 1 411 1 IPA IPA . M 7 HOH A 1 501 39 HOH HOH . M 7 HOH A 2 502 1 HOH HOH . M 7 HOH A 3 503 33 HOH HOH . M 7 HOH A 4 504 37 HOH HOH . M 7 HOH A 5 505 3 HOH HOH . M 7 HOH A 6 506 18 HOH HOH . M 7 HOH A 7 507 17 HOH HOH . M 7 HOH A 8 508 25 HOH HOH . M 7 HOH A 9 509 10 HOH HOH . M 7 HOH A 10 510 16 HOH HOH . M 7 HOH A 11 511 38 HOH HOH . M 7 HOH A 12 512 6 HOH HOH . M 7 HOH A 13 513 14 HOH HOH . M 7 HOH A 14 514 8 HOH HOH . M 7 HOH A 15 515 4 HOH HOH . M 7 HOH A 16 516 5 HOH HOH . M 7 HOH A 17 517 13 HOH HOH . M 7 HOH A 18 518 7 HOH HOH . M 7 HOH A 19 519 11 HOH HOH . M 7 HOH A 20 520 31 HOH HOH . M 7 HOH A 21 521 12 HOH HOH . M 7 HOH A 22 522 2 HOH HOH . M 7 HOH A 23 523 9 HOH HOH . M 7 HOH A 24 524 26 HOH HOH . M 7 HOH A 25 525 40 HOH HOH . M 7 HOH A 26 526 30 HOH HOH . M 7 HOH A 27 527 28 HOH HOH . M 7 HOH A 28 528 32 HOH HOH . M 7 HOH A 29 529 24 HOH HOH . M 7 HOH A 30 530 27 HOH HOH . M 7 HOH A 31 531 35 HOH HOH . M 7 HOH A 32 532 20 HOH HOH . M 7 HOH A 33 533 36 HOH HOH . M 7 HOH A 34 534 34 HOH HOH . M 7 HOH A 35 535 19 HOH HOH . M 7 HOH A 36 536 21 HOH HOH . M 7 HOH A 37 537 29 HOH HOH . M 7 HOH A 38 538 22 HOH HOH . M 7 HOH A 39 539 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . K 5 7.12 33.444 24.24 1 106.91 ? S SO4 410 A 1 HETATM 2 O O1 SO4 . . . K 5 6.462 32.224 23.779 1 90.36 ? O1 SO4 410 A 1 HETATM 3 O O2 SO4 . . . K 5 6.732 34.561 23.382 1 65.79 ? O2 SO4 410 A 1 HETATM 4 O O3 SO4 . . . K 5 8.567 33.266 24.177 1 95.62 ? O3 SO4 410 A 1 HETATM 5 O O4 SO4 . . . K 5 6.723 33.723 25.618 1 108.27 ? O4 SO4 410 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #