data_5B4P
#
_model_server_result.job_id            cPx1GnLrVX1-llbHZhrVmQ 
_model_server_result.datetime_utc      '2025-03-12 08:26:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5b4p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":101}' 
#
_entry.id    5B4P 
#
_exptl.entry_id    5B4P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5B4P 
_cell.length_a            55.837 
_cell.length_b            87.553 
_cell.length_c            188.392 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5B4P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        17 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,O,P 1 1 
C,D,K,L,M,N,Q,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 220 A CYS 218 1_555 A SG CYS 247 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
disulf ? disulf2 B SG CYS 22 B CYS 21 1_555 B SG CYS 48 B CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf3 B SG CYS 23 B CYS 22 1_555 B SG CYS 55 B CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? 
disulf ? disulf4 B SG CYS 28 B CYS 27 1_555 D SG CYS 28 D CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf5 B SG CYS 35 B CYS 34 1_555 B SG CYS 56 B CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
disulf ? disulf6 C SG CYS 220 C CYS 218 1_555 C SG CYS 247 C CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
disulf ? disulf7 D SG CYS 22 D CYS 21 1_555 D SG CYS 48 D CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf8 D SG CYS 23 D CYS 22 1_555 D SG CYS 55 D CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
disulf ? disulf9 D SG CYS 35 D CYS 34 1_555 D SG CYS 56 D CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
covale ? covale1 C O ARG 255 C ARG 253 1_555 C N ILE 257 C ILE 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.193 ? 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 1PE sing 1 n n 
OH2 HO2 1PE sing 2 n n 
C12 C22 1PE sing 3 n n 
C12 H121 1PE sing 4 n n 
C12 H122 1PE sing 5 n n 
C22 OH3 1PE sing 6 n n 
C22 H221 1PE sing 7 n n 
C22 H222 1PE sing 8 n n 
OH3 C23 1PE sing 9 n n 
C13 C23 1PE sing 10 n n 
C13 OH4 1PE sing 11 n n 
C13 H131 1PE sing 12 n n 
C13 H132 1PE sing 13 n n 
C23 H231 1PE sing 14 n n 
C23 H232 1PE sing 15 n n 
OH4 C24 1PE sing 16 n n 
C14 C24 1PE sing 17 n n 
C14 OH5 1PE sing 18 n n 
C14 H141 1PE sing 19 n n 
C14 H142 1PE sing 20 n n 
C24 H241 1PE sing 21 n n 
C24 H242 1PE sing 22 n n 
OH5 C25 1PE sing 23 n n 
C15 C25 1PE sing 24 n n 
C15 OH6 1PE sing 25 n n 
C15 H151 1PE sing 26 n n 
C15 H152 1PE sing 27 n n 
C25 H251 1PE sing 28 n n 
C25 H252 1PE sing 29 n n 
OH6 C26 1PE sing 30 n n 
C16 C26 1PE sing 31 n n 
C16 OH7 1PE sing 32 n n 
C16 H161 1PE sing 33 n n 
C16 H162 1PE sing 34 n n 
C26 H261 1PE sing 35 n n 
C26 H262 1PE sing 36 n n 
OH7 HO7 1PE sing 37 n n 
#
_atom_sites.entry_id                     5B4P 
_atom_sites.fract_transf_matrix[1][1]    0.017909 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011422 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005308 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 1PE A 1 301 1 1PE 1PE . 
F 4 SO4 A 1 302 6 SO4 SO4 . 
G 4 SO4 A 1 303 7 SO4 SO4 . 
H 4 SO4 A 1 304 8 SO4 SO4 . 
I 3 1PE B 1 101 2 1PE 1PE . 
J 4 SO4 B 1 102 5 SO4 SO4 . 
K 4 SO4 C 1 301 2 SO4 SO4 . 
L 4 SO4 C 1 302 3 SO4 SO4 . 
M 4 SO4 C 1 303 4 SO4 SO4 . 
N 4 SO4 D 1 101 1 SO4 SO4 . 
O 5 HOH A 1 401 60 HOH HOH . 
O 5 HOH A 2 402 43 HOH HOH . 
O 5 HOH A 3 403 51 HOH HOH . 
O 5 HOH A 4 404 50 HOH HOH . 
O 5 HOH A 5 405 67 HOH HOH . 
O 5 HOH A 6 406 20 HOH HOH . 
O 5 HOH A 7 407 12 HOH HOH . 
O 5 HOH A 8 408 36 HOH HOH . 
O 5 HOH A 9 409 5 HOH HOH . 
O 5 HOH A 10 410 61 HOH HOH . 
O 5 HOH A 11 411 40 HOH HOH . 
O 5 HOH A 12 412 7 HOH HOH . 
O 5 HOH A 13 413 6 HOH HOH . 
O 5 HOH A 14 414 45 HOH HOH . 
O 5 HOH A 15 415 46 HOH HOH . 
O 5 HOH A 16 416 17 HOH HOH . 
O 5 HOH A 17 417 39 HOH HOH . 
O 5 HOH A 18 418 14 HOH HOH . 
O 5 HOH A 19 419 18 HOH HOH . 
O 5 HOH A 20 420 1 HOH HOH . 
O 5 HOH A 21 421 37 HOH HOH . 
O 5 HOH A 22 422 41 HOH HOH . 
O 5 HOH A 23 423 56 HOH HOH . 
O 5 HOH A 24 424 38 HOH HOH . 
O 5 HOH A 25 425 10 HOH HOH . 
O 5 HOH A 26 426 58 HOH HOH . 
O 5 HOH A 27 427 57 HOH HOH . 
O 5 HOH A 28 428 68 HOH HOH . 
P 5 HOH B 1 201 59 HOH HOH . 
P 5 HOH B 2 202 22 HOH HOH . 
P 5 HOH B 3 203 52 HOH HOH . 
P 5 HOH B 4 204 24 HOH HOH . 
P 5 HOH B 5 205 8 HOH HOH . 
P 5 HOH B 6 206 44 HOH HOH . 
P 5 HOH B 7 207 63 HOH HOH . 
P 5 HOH B 8 208 9 HOH HOH . 
P 5 HOH B 9 209 62 HOH HOH . 
Q 5 HOH C 1 401 19 HOH HOH . 
Q 5 HOH C 2 402 23 HOH HOH . 
Q 5 HOH C 3 403 4 HOH HOH . 
Q 5 HOH C 4 404 30 HOH HOH . 
Q 5 HOH C 5 405 28 HOH HOH . 
Q 5 HOH C 6 406 32 HOH HOH . 
Q 5 HOH C 7 407 53 HOH HOH . 
Q 5 HOH C 8 408 21 HOH HOH . 
Q 5 HOH C 9 409 31 HOH HOH . 
Q 5 HOH C 10 410 11 HOH HOH . 
Q 5 HOH C 11 411 48 HOH HOH . 
Q 5 HOH C 12 412 49 HOH HOH . 
Q 5 HOH C 13 413 16 HOH HOH . 
Q 5 HOH C 14 414 65 HOH HOH . 
Q 5 HOH C 15 415 15 HOH HOH . 
Q 5 HOH C 16 416 29 HOH HOH . 
Q 5 HOH C 17 417 3 HOH HOH . 
Q 5 HOH C 18 418 66 HOH HOH . 
Q 5 HOH C 19 419 13 HOH HOH . 
Q 5 HOH C 20 420 54 HOH HOH . 
Q 5 HOH C 21 421 64 HOH HOH . 
Q 5 HOH C 22 422 25 HOH HOH . 
Q 5 HOH C 23 423 2 HOH HOH . 
Q 5 HOH C 24 424 27 HOH HOH . 
Q 5 HOH C 25 425 42 HOH HOH . 
R 5 HOH D 1 201 69 HOH HOH . 
R 5 HOH D 2 202 35 HOH HOH . 
R 5 HOH D 3 203 26 HOH HOH . 
R 5 HOH D 4 204 34 HOH HOH . 
R 5 HOH D 5 205 55 HOH HOH . 
R 5 HOH D 6 206 47 HOH HOH . 
R 5 HOH D 7 207 33 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . I 3 -36.773 -10.11 -63.26 1 78.33 ? OH2 1PE 101 B 1 
HETATM 2 C C12 1PE . . . I 3 -36.935 -8.924 -63.934 1 86.27 ? C12 1PE 101 B 1 
HETATM 3 C C22 1PE . . . I 3 -36.131 -8.939 -65.266 1 84.71 ? C22 1PE 101 B 1 
HETATM 4 O OH3 1PE . . . I 3 -36.288 -7.79 -66.069 1 80.07 ? OH3 1PE 101 B 1 
HETATM 5 C C13 1PE . . . I 3 -37.289 -5.752 -66.975 1 73.04 ? C13 1PE 101 B 1 
HETATM 6 C C23 1PE . . . I 3 -36.917 -6.591 -65.697 1 73.75 ? C23 1PE 101 B 1 
HETATM 7 O OH4 1PE . . . I 3 -37.172 -4.368 -66.864 1 75.15 ? OH4 1PE 101 B 1 
HETATM 8 C C14 1PE . . . I 3 -38.061 -2.039 -66.697 1 77.46 ? C14 1PE 101 B 1 
HETATM 9 C C24 1PE . . . I 3 -38.361 -3.517 -66.944 1 75.13 ? C24 1PE 101 B 1 
HETATM 10 O OH5 1PE . . . I 3 -39.185 -1.373 -66.082 1 84.67 ? OH5 1PE 101 B 1 
HETATM 11 C C15 1PE . . . I 3 -40.409 0.666 -66.397 1 85.93 ? C15 1PE 101 B 1 
HETATM 12 C C25 1PE . . . I 3 -39.177 -0.023 -65.832 1 89.52 ? C25 1PE 101 B 1 
HETATM 13 O OH6 1PE . . . I 3 -40.275 0.783 -67.809 1 82.34 ? OH6 1PE 101 B 1 
HETATM 14 C C16 1PE . . . I 3 -38.765 1.189 -69.662 1 80 ? C16 1PE 101 B 1 
HETATM 15 C C26 1PE . . . I 3 -39.439 1.742 -68.391 1 82.92 ? C26 1PE 101 B 1 
HETATM 16 O OH7 1PE . . . I 3 -37.917 0.186 -69.332 1 79.29 ? OH7 1PE 101 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           524 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#