data_5B57 # _model_server_result.job_id Ns-MPqQh3SFVrdoz4g0Tnw _model_server_result.datetime_utc '2024-12-26 20:15:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b57 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 5B57 # _exptl.entry_id 5B57 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5B57 _cell.length_a 110.824 _cell.length_b 118.283 _cell.length_c 142.747 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B57 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 83 n n C40 C43 DMU sing 84 n n C37 C34 DMU sing 85 n n C34 C31 DMU sing 86 n n C31 C28 DMU sing 87 n n C28 C25 DMU sing 88 n n C22 C25 DMU sing 89 n n C22 C19 DMU sing 90 n n O61 C57 DMU sing 91 n n O4 C7 DMU sing 92 n n C18 C19 DMU sing 93 n n C18 O16 DMU sing 94 n n O5 C6 DMU sing 95 n n O5 C4 DMU sing 96 n n C57 C4 DMU sing 97 n n C6 O16 DMU sing 98 n n C6 C1 DMU sing 99 n n C7 C5 DMU sing 100 n n C7 C8 DMU sing 101 n n C4 C3 DMU sing 102 n n O1 C10 DMU sing 103 n n O1 C9 DMU sing 104 n n C10 C5 DMU sing 105 n n C10 O7 DMU sing 106 n n C5 O3 DMU sing 107 n n O49 C1 DMU sing 108 n n C8 C9 DMU sing 109 n n C8 O2 DMU sing 110 n n C1 C2 DMU sing 111 n n C11 C9 DMU sing 112 n n C11 O6 DMU sing 113 n n C3 O7 DMU sing 114 n n C3 C2 DMU sing 115 n n C2 O55 DMU sing 116 n n C1 H1 DMU sing 117 n n C2 H2 DMU sing 118 n n C3 H3 DMU sing 119 n n C4 H4 DMU sing 120 n n C6 H5 DMU sing 121 n n C18 H6 DMU sing 122 n n C18 H7 DMU sing 123 n n C19 H8 DMU sing 124 n n C19 H9 DMU sing 125 n n C22 H10 DMU sing 126 n n C22 H11 DMU sing 127 n n C25 H12 DMU sing 128 n n C25 H13 DMU sing 129 n n C28 H14 DMU sing 130 n n C28 H15 DMU sing 131 n n C31 H16 DMU sing 132 n n C31 H17 DMU sing 133 n n C34 H18 DMU sing 134 n n C34 H19 DMU sing 135 n n C37 H20 DMU sing 136 n n C37 H21 DMU sing 137 n n C40 H22 DMU sing 138 n n C40 H23 DMU sing 139 n n C43 H24 DMU sing 140 n n C43 H25 DMU sing 141 n n C43 H26 DMU sing 142 n n O49 H27 DMU sing 143 n n O55 H28 DMU sing 144 n n C57 H29 DMU sing 145 n n C57 H30 DMU sing 146 n n O61 H31 DMU sing 147 n n C5 H32 DMU sing 148 n n C7 H33 DMU sing 149 n n C8 H34 DMU sing 150 n n C9 H35 DMU sing 151 n n C10 H36 DMU sing 152 n n O2 H37 DMU sing 153 n n O3 H38 DMU sing 154 n n O4 H39 DMU sing 155 n n C11 H40 DMU sing 156 n n C11 H41 DMU sing 157 n n O6 H42 DMU sing 158 n n # _atom_sites.entry_id 5B57 _atom_sites.fract_transf_matrix[1][1] 0.009023 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 DMU A 1 401 401 DMU DMU . F 3 DMU B 1 401 401 DMU DMU . G 4 SO4 C 1 301 274 SO4 SO4 . H 4 SO4 D 1 301 274 SO4 SO4 . I 5 HOH A 1 501 408 HOH HOH . I 5 HOH A 2 502 406 HOH HOH . I 5 HOH A 3 503 407 HOH HOH . I 5 HOH A 4 504 403 HOH HOH . I 5 HOH A 5 505 404 HOH HOH . I 5 HOH A 6 506 405 HOH HOH . I 5 HOH A 7 507 402 HOH HOH . J 5 HOH B 1 501 402 HOH HOH . J 5 HOH B 2 502 404 HOH HOH . J 5 HOH B 3 503 403 HOH HOH . K 5 HOH C 1 401 301 HOH HOH . K 5 HOH C 2 402 306 HOH HOH . K 5 HOH C 3 403 305 HOH HOH . K 5 HOH C 4 404 307 HOH HOH . K 5 HOH C 5 405 304 HOH HOH . K 5 HOH C 6 406 302 HOH HOH . K 5 HOH C 7 407 303 HOH HOH . L 5 HOH D 1 401 305 HOH HOH . L 5 HOH D 2 402 302 HOH HOH . L 5 HOH D 3 403 304 HOH HOH . L 5 HOH D 4 404 303 HOH HOH . L 5 HOH D 5 405 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . F 3 7.486 45.252 -58.753 1 77.7 ? C1 DMU 401 B 1 HETATM 2 C C2 DMU . . . F 3 7.578 44.957 -60.229 1 77.57 ? C2 DMU 401 B 1 HETATM 3 C C3 DMU . . . F 3 8.873 44.183 -60.532 1 77.06 ? C3 DMU 401 B 1 HETATM 4 C C4 DMU . . . F 3 9.019 42.952 -59.591 1 77.67 ? C4 DMU 401 B 1 HETATM 5 O O5 DMU . . . F 3 8.801 43.333 -58.196 1 78.3 ? O5 DMU 401 B 1 HETATM 6 C C6 DMU . . . F 3 7.513 43.951 -57.995 1 76.71 ? C6 DMU 401 B 1 HETATM 7 O O7 DMU . . . F 3 8.86 43.741 -61.902 1 77.63 ? O7 DMU 401 B 1 HETATM 8 O O16 DMU . . . F 3 7.288 44.215 -56.611 1 74.52 ? O16 DMU 401 B 1 HETATM 9 C C18 DMU . . . F 3 6.124 43.533 -56.127 1 73.57 ? C18 DMU 401 B 1 HETATM 10 C C19 DMU . . . F 3 6.226 43.348 -54.614 1 72.77 ? C19 DMU 401 B 1 HETATM 11 C C22 DMU . . . F 3 6.195 41.867 -54.241 1 71.2 ? C22 DMU 401 B 1 HETATM 12 C C25 DMU . . . F 3 6.543 41.662 -52.768 1 69.78 ? C25 DMU 401 B 1 HETATM 13 C C28 DMU . . . F 3 6.102 40.276 -52.276 1 68.76 ? C28 DMU 401 B 1 HETATM 14 C C31 DMU . . . F 3 6.887 39.853 -51.023 1 68.39 ? C31 DMU 401 B 1 HETATM 15 C C34 DMU . . . F 3 5.946 39.421 -49.894 1 67.33 ? C34 DMU 401 B 1 HETATM 16 C C37 DMU . . . F 3 6.395 40.004 -48.537 1 68.18 ? C37 DMU 401 B 1 HETATM 17 C C40 DMU . . . F 3 5.323 40.941 -47.95 1 68.95 ? C40 DMU 401 B 1 HETATM 18 C C43 DMU . . . F 3 5.537 41.166 -46.465 1 69.24 ? C43 DMU 401 B 1 HETATM 19 O O49 DMU . . . F 3 6.282 45.952 -58.469 1 80.91 ? O49 DMU 401 B 1 HETATM 20 O O55 DMU . . . F 3 7.53 46.17 -60.977 1 79.21 ? O55 DMU 401 B 1 HETATM 21 C C57 DMU . . . F 3 10.393 42.297 -59.734 1 77.95 ? C57 DMU 401 B 1 HETATM 22 O O61 DMU . . . F 3 10.436 41.524 -60.94 1 78.46 ? O61 DMU 401 B 1 HETATM 23 C C5 DMU . . . F 3 9.364 45.044 -63.903 1 77.4 ? C5 DMU 401 B 1 HETATM 24 C C7 DMU . . . F 3 8.569 44.217 -64.93 1 76.62 ? C7 DMU 401 B 1 HETATM 25 C C8 DMU . . . F 3 9.317 42.947 -65.322 1 76.5 ? C8 DMU 401 B 1 HETATM 26 C C9 DMU . . . F 3 9.772 42.183 -64.096 1 75.56 ? C9 DMU 401 B 1 HETATM 27 O O1 DMU . . . F 3 10.619 43.017 -63.309 1 75.74 ? O1 DMU 401 B 1 HETATM 28 C C10 DMU . . . F 3 9.922 44.165 -62.77 1 76.72 ? C10 DMU 401 B 1 HETATM 29 O O2 DMU . . . F 3 8.45 42.108 -66.105 1 77.59 ? O2 DMU 401 B 1 HETATM 30 O O3 DMU . . . F 3 8.509 46.058 -63.34 1 79.9 ? O3 DMU 401 B 1 HETATM 31 O O4 DMU . . . F 3 8.32 45.014 -66.106 1 76.04 ? O4 DMU 401 B 1 HETATM 32 C C11 DMU . . . F 3 10.53 40.917 -64.496 1 75.75 ? C11 DMU 401 B 1 HETATM 33 O O6 DMU . . . F 3 11.616 40.698 -63.591 1 75.83 ? O6 DMU 401 B 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 33 #