data_5B75 # _model_server_result.job_id t3NYCCeHogrvFA9XpCM3RQ _model_server_result.datetime_utc '2024-11-09 23:25:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b75 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5B75 # _exptl.entry_id 5B75 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5B75 _cell.length_a 47.677 _cell.length_b 48.122 _cell.length_c 76.191 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B75 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLY 13 B GLY 13 1_555 B N BTK 14 B BTK 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 B C BTK 14 B BTK 14 1_555 B N ALA 15 B ALA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A SG CYS 17 A CYS 209 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc2 A SG CYS 20 A CYS 212 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc3 A SG CYS 38 A CYS 230 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc4 A SG CYS 41 A CYS 233 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc5 A ND1 HIS 46 A HIS 238 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc6 A SG CYS 49 A CYS 241 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc7 A SG CYS 67 A CYS 259 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc8 A SG CYS 70 A CYS 262 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc9 A SG CYS 73 A CYS 265 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc10 A SG CYS 76 A CYS 268 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc11 A SG CYS 89 A CYS 281 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc12 A SG CYS 92 A CYS 284 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc13 A ND1 HIS 97 A HIS 289 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc14 A SG CYS 100 A CYS 292 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc15 A SG CYS 115 A CYS 307 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc16 A SG CYS 118 A CYS 310 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5B75 _atom_sites.fract_transf_matrix[1][1] 0.020974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020781 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013125 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 1 ZN ZN . D 3 ZN A 1 402 2 ZN ZN . E 3 ZN A 1 403 3 ZN ZN . F 3 ZN A 1 404 4 ZN ZN . G 4 SO4 B 1 101 1 SO4 SO4 . H 5 HOH A 1 501 140 HOH HOH . H 5 HOH A 2 502 138 HOH HOH . H 5 HOH A 3 503 52 HOH HOH . H 5 HOH A 4 504 162 HOH HOH . H 5 HOH A 5 505 41 HOH HOH . H 5 HOH A 6 506 174 HOH HOH . H 5 HOH A 7 507 97 HOH HOH . H 5 HOH A 8 508 72 HOH HOH . H 5 HOH A 9 509 163 HOH HOH . H 5 HOH A 10 510 54 HOH HOH . H 5 HOH A 11 511 20 HOH HOH . H 5 HOH A 12 512 22 HOH HOH . H 5 HOH A 13 513 121 HOH HOH . H 5 HOH A 14 514 39 HOH HOH . H 5 HOH A 15 515 168 HOH HOH . H 5 HOH A 16 516 46 HOH HOH . H 5 HOH A 17 517 73 HOH HOH . H 5 HOH A 18 518 40 HOH HOH . H 5 HOH A 19 519 17 HOH HOH . H 5 HOH A 20 520 136 HOH HOH . H 5 HOH A 21 521 1 HOH HOH . H 5 HOH A 22 522 78 HOH HOH . H 5 HOH A 23 523 33 HOH HOH . H 5 HOH A 24 524 32 HOH HOH . H 5 HOH A 25 525 11 HOH HOH . H 5 HOH A 26 526 6 HOH HOH . H 5 HOH A 27 527 81 HOH HOH . H 5 HOH A 28 528 24 HOH HOH . H 5 HOH A 29 529 57 HOH HOH . H 5 HOH A 30 530 70 HOH HOH . H 5 HOH A 31 531 80 HOH HOH . H 5 HOH A 32 532 63 HOH HOH . H 5 HOH A 33 533 160 HOH HOH . H 5 HOH A 34 534 4 HOH HOH . H 5 HOH A 35 535 3 HOH HOH . H 5 HOH A 36 536 64 HOH HOH . H 5 HOH A 37 537 44 HOH HOH . H 5 HOH A 38 538 127 HOH HOH . H 5 HOH A 39 539 13 HOH HOH . H 5 HOH A 40 540 7 HOH HOH . H 5 HOH A 41 541 112 HOH HOH . H 5 HOH A 42 542 25 HOH HOH . H 5 HOH A 43 543 8 HOH HOH . H 5 HOH A 44 544 114 HOH HOH . H 5 HOH A 45 545 175 HOH HOH . H 5 HOH A 46 546 30 HOH HOH . H 5 HOH A 47 547 84 HOH HOH . H 5 HOH A 48 548 157 HOH HOH . H 5 HOH A 49 549 19 HOH HOH . H 5 HOH A 50 550 28 HOH HOH . H 5 HOH A 51 551 65 HOH HOH . H 5 HOH A 52 552 45 HOH HOH . H 5 HOH A 53 553 37 HOH HOH . H 5 HOH A 54 554 154 HOH HOH . H 5 HOH A 55 555 10 HOH HOH . H 5 HOH A 56 556 74 HOH HOH . H 5 HOH A 57 557 67 HOH HOH . H 5 HOH A 58 558 146 HOH HOH . H 5 HOH A 59 559 38 HOH HOH . H 5 HOH A 60 560 90 HOH HOH . H 5 HOH A 61 561 42 HOH HOH . H 5 HOH A 62 562 61 HOH HOH . H 5 HOH A 63 563 133 HOH HOH . H 5 HOH A 64 564 59 HOH HOH . H 5 HOH A 65 565 60 HOH HOH . H 5 HOH A 66 566 117 HOH HOH . H 5 HOH A 67 567 130 HOH HOH . H 5 HOH A 68 568 153 HOH HOH . H 5 HOH A 69 569 152 HOH HOH . H 5 HOH A 70 570 75 HOH HOH . H 5 HOH A 71 571 34 HOH HOH . H 5 HOH A 72 572 2 HOH HOH . H 5 HOH A 73 573 79 HOH HOH . H 5 HOH A 74 574 82 HOH HOH . H 5 HOH A 75 575 26 HOH HOH . H 5 HOH A 76 576 58 HOH HOH . H 5 HOH A 77 577 156 HOH HOH . H 5 HOH A 78 578 36 HOH HOH . H 5 HOH A 79 579 21 HOH HOH . H 5 HOH A 80 580 35 HOH HOH . H 5 HOH A 81 581 31 HOH HOH . H 5 HOH A 82 582 180 HOH HOH . H 5 HOH A 83 583 76 HOH HOH . H 5 HOH A 84 584 115 HOH HOH . H 5 HOH A 85 585 71 HOH HOH . H 5 HOH A 86 586 185 HOH HOH . H 5 HOH A 87 587 91 HOH HOH . H 5 HOH A 88 588 93 HOH HOH . H 5 HOH A 89 589 159 HOH HOH . H 5 HOH A 90 590 188 HOH HOH . H 5 HOH A 91 591 170 HOH HOH . H 5 HOH A 92 592 66 HOH HOH . H 5 HOH A 93 593 167 HOH HOH . H 5 HOH A 94 594 27 HOH HOH . H 5 HOH A 95 595 131 HOH HOH . H 5 HOH A 96 596 148 HOH HOH . H 5 HOH A 97 597 111 HOH HOH . H 5 HOH A 98 598 55 HOH HOH . H 5 HOH A 99 599 158 HOH HOH . H 5 HOH A 100 600 186 HOH HOH . H 5 HOH A 101 601 96 HOH HOH . H 5 HOH A 102 602 108 HOH HOH . H 5 HOH A 103 603 183 HOH HOH . H 5 HOH A 104 604 151 HOH HOH . H 5 HOH A 105 605 18 HOH HOH . H 5 HOH A 106 606 119 HOH HOH . H 5 HOH A 107 607 135 HOH HOH . H 5 HOH A 108 608 109 HOH HOH . H 5 HOH A 109 609 62 HOH HOH . H 5 HOH A 110 610 85 HOH HOH . H 5 HOH A 111 611 182 HOH HOH . H 5 HOH A 112 612 178 HOH HOH . H 5 HOH A 113 613 106 HOH HOH . H 5 HOH A 114 614 179 HOH HOH . H 5 HOH A 115 615 94 HOH HOH . H 5 HOH A 116 616 187 HOH HOH . H 5 HOH A 117 617 92 HOH HOH . H 5 HOH A 118 618 144 HOH HOH . H 5 HOH A 119 619 177 HOH HOH . H 5 HOH A 120 620 105 HOH HOH . H 5 HOH A 121 621 102 HOH HOH . H 5 HOH A 122 622 120 HOH HOH . H 5 HOH A 123 623 98 HOH HOH . H 5 HOH A 124 624 122 HOH HOH . H 5 HOH A 125 625 118 HOH HOH . H 5 HOH A 126 626 139 HOH HOH . H 5 HOH A 127 627 88 HOH HOH . H 5 HOH A 128 628 155 HOH HOH . H 5 HOH A 129 629 87 HOH HOH . H 5 HOH A 130 630 43 HOH HOH . H 5 HOH A 131 631 181 HOH HOH . H 5 HOH A 132 632 134 HOH HOH . H 5 HOH A 133 633 147 HOH HOH . H 5 HOH A 134 634 104 HOH HOH . H 5 HOH A 135 635 100 HOH HOH . H 5 HOH A 136 636 123 HOH HOH . H 5 HOH A 137 637 15 HOH HOH . H 5 HOH A 138 638 128 HOH HOH . H 5 HOH A 139 639 169 HOH HOH . H 5 HOH A 140 640 103 HOH HOH . H 5 HOH A 141 641 23 HOH HOH . H 5 HOH A 142 642 176 HOH HOH . H 5 HOH A 143 643 150 HOH HOH . H 5 HOH A 144 644 143 HOH HOH . I 5 HOH B 1 201 68 HOH HOH . I 5 HOH B 2 202 173 HOH HOH . I 5 HOH B 3 203 132 HOH HOH . I 5 HOH B 4 204 5 HOH HOH . I 5 HOH B 5 205 95 HOH HOH . I 5 HOH B 6 206 145 HOH HOH . I 5 HOH B 7 207 16 HOH HOH . I 5 HOH B 8 208 12 HOH HOH . I 5 HOH B 9 209 14 HOH HOH . I 5 HOH B 10 210 101 HOH HOH . I 5 HOH B 11 211 69 HOH HOH . I 5 HOH B 12 212 47 HOH HOH . I 5 HOH B 13 213 56 HOH HOH . I 5 HOH B 14 214 29 HOH HOH . I 5 HOH B 15 215 124 HOH HOH . I 5 HOH B 16 216 51 HOH HOH . I 5 HOH B 17 217 53 HOH HOH . I 5 HOH B 18 218 49 HOH HOH . I 5 HOH B 19 219 9 HOH HOH . I 5 HOH B 20 220 113 HOH HOH . I 5 HOH B 21 221 48 HOH HOH . I 5 HOH B 22 222 83 HOH HOH . I 5 HOH B 23 223 184 HOH HOH . I 5 HOH B 24 224 110 HOH HOH . I 5 HOH B 25 225 142 HOH HOH . I 5 HOH B 26 226 77 HOH HOH . I 5 HOH B 27 227 99 HOH HOH . I 5 HOH B 28 228 171 HOH HOH . I 5 HOH B 29 229 89 HOH HOH . I 5 HOH B 30 230 166 HOH HOH . I 5 HOH B 31 231 107 HOH HOH . I 5 HOH B 32 232 161 HOH HOH . I 5 HOH B 33 233 141 HOH HOH . I 5 HOH B 34 234 129 HOH HOH . I 5 HOH B 35 235 126 HOH HOH . I 5 HOH B 36 236 149 HOH HOH . I 5 HOH B 37 237 125 HOH HOH . I 5 HOH B 38 238 50 HOH HOH . I 5 HOH B 39 239 86 HOH HOH . I 5 HOH B 40 240 165 HOH HOH . I 5 HOH B 41 241 137 HOH HOH . I 5 HOH B 42 242 116 HOH HOH . I 5 HOH B 43 243 172 HOH HOH . I 5 HOH B 44 244 164 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 6.462 _atom_site.Cartn_y -3.487 _atom_site.Cartn_z 23.922 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #