data_5B76
#
_model_server_result.job_id            '_mw933-zaQWozvQ-uWU6xA' 
_model_server_result.datetime_utc      '2024-10-28 02:29:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5b76 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5B76 
#
_exptl.entry_id    5B76 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5B76 
_cell.length_a            48.12 
_cell.length_b            47.633 
_cell.length_c            76.109 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5B76 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C GLY 13 B GLY 13 1_555 B N KCR 14 B KCR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 B C KCR 14 B KCR 14 1_555 B N ALA 15 B ALA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 B C ALA 25 B ALA 25 1_555 B N NH2 26 B NH2 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 A SG CYS 17 A CYS 209 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc2 A SG CYS 20 A CYS 212 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc3 A SG CYS 38 A CYS 230 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc4 A SG CYS 41 A CYS 233 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc5 A ND1 HIS 46 A HIS 238 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc6 A SG CYS 49 A CYS 241 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc7 A SG CYS 67 A CYS 259 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc8 A SG CYS 70 A CYS 262 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc9 A SG CYS 73 A CYS 265 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc10 A SG CYS 76 A CYS 268 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc11 A SG CYS 89 A CYS 281 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc12 A SG CYS 92 A CYS 284 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc13 A ND1 HIS 97 A HIS 289 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc14 A SG CYS 100 A CYS 292 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc15 A SG CYS 115 A CYS 307 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc16 A SG CYS 118 A CYS 310 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5B76 
_atom_sites.fract_transf_matrix[1][1]    0.020781 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020994 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 401 401 ZN ZN . 
D 3 ZN A 1 402 402 ZN ZN . 
E 3 ZN A 1 403 403 ZN ZN . 
F 3 ZN A 1 404 404 ZN ZN . 
G 4 SO4 A 1 405 2 SO4 SO4 . 
H 4 SO4 A 1 406 3 SO4 SO4 . 
I 4 SO4 B 1 101 1 SO4 SO4 . 
J 5 HOH A 1 501 111 HOH HOH . 
J 5 HOH A 2 502 151 HOH HOH . 
J 5 HOH A 3 503 171 HOH HOH . 
J 5 HOH A 4 504 163 HOH HOH . 
J 5 HOH A 5 505 72 HOH HOH . 
J 5 HOH A 6 506 40 HOH HOH . 
J 5 HOH A 7 507 21 HOH HOH . 
J 5 HOH A 8 508 26 HOH HOH . 
J 5 HOH A 9 509 60 HOH HOH . 
J 5 HOH A 10 510 177 HOH HOH . 
J 5 HOH A 11 511 23 HOH HOH . 
J 5 HOH A 12 512 15 HOH HOH . 
J 5 HOH A 13 513 81 HOH HOH . 
J 5 HOH A 14 514 91 HOH HOH . 
J 5 HOH A 15 515 165 HOH HOH . 
J 5 HOH A 16 516 20 HOH HOH . 
J 5 HOH A 17 517 140 HOH HOH . 
J 5 HOH A 18 518 131 HOH HOH . 
J 5 HOH A 19 519 137 HOH HOH . 
J 5 HOH A 20 520 75 HOH HOH . 
J 5 HOH A 21 521 159 HOH HOH . 
J 5 HOH A 22 522 98 HOH HOH . 
J 5 HOH A 23 523 4 HOH HOH . 
J 5 HOH A 24 524 14 HOH HOH . 
J 5 HOH A 25 525 39 HOH HOH . 
J 5 HOH A 26 526 124 HOH HOH . 
J 5 HOH A 27 527 94 HOH HOH . 
J 5 HOH A 28 528 172 HOH HOH . 
J 5 HOH A 29 529 29 HOH HOH . 
J 5 HOH A 30 530 34 HOH HOH . 
J 5 HOH A 31 531 92 HOH HOH . 
J 5 HOH A 32 532 36 HOH HOH . 
J 5 HOH A 33 533 65 HOH HOH . 
J 5 HOH A 34 534 10 HOH HOH . 
J 5 HOH A 35 535 52 HOH HOH . 
J 5 HOH A 36 536 18 HOH HOH . 
J 5 HOH A 37 537 176 HOH HOH . 
J 5 HOH A 38 538 17 HOH HOH . 
J 5 HOH A 39 539 48 HOH HOH . 
J 5 HOH A 40 540 22 HOH HOH . 
J 5 HOH A 41 541 2 HOH HOH . 
J 5 HOH A 42 542 19 HOH HOH . 
J 5 HOH A 43 543 132 HOH HOH . 
J 5 HOH A 44 544 1 HOH HOH . 
J 5 HOH A 45 545 83 HOH HOH . 
J 5 HOH A 46 546 37 HOH HOH . 
J 5 HOH A 47 547 30 HOH HOH . 
J 5 HOH A 48 548 28 HOH HOH . 
J 5 HOH A 49 549 73 HOH HOH . 
J 5 HOH A 50 550 85 HOH HOH . 
J 5 HOH A 51 551 27 HOH HOH . 
J 5 HOH A 52 552 169 HOH HOH . 
J 5 HOH A 53 553 160 HOH HOH . 
J 5 HOH A 54 554 55 HOH HOH . 
J 5 HOH A 55 555 45 HOH HOH . 
J 5 HOH A 56 556 99 HOH HOH . 
J 5 HOH A 57 557 11 HOH HOH . 
J 5 HOH A 58 558 54 HOH HOH . 
J 5 HOH A 59 559 8 HOH HOH . 
J 5 HOH A 60 560 134 HOH HOH . 
J 5 HOH A 61 561 141 HOH HOH . 
J 5 HOH A 62 562 115 HOH HOH . 
J 5 HOH A 63 563 41 HOH HOH . 
J 5 HOH A 64 564 59 HOH HOH . 
J 5 HOH A 65 565 87 HOH HOH . 
J 5 HOH A 66 566 88 HOH HOH . 
J 5 HOH A 67 567 79 HOH HOH . 
J 5 HOH A 68 568 96 HOH HOH . 
J 5 HOH A 69 569 107 HOH HOH . 
J 5 HOH A 70 570 77 HOH HOH . 
J 5 HOH A 71 571 136 HOH HOH . 
J 5 HOH A 72 572 89 HOH HOH . 
J 5 HOH A 73 573 76 HOH HOH . 
J 5 HOH A 74 574 3 HOH HOH . 
J 5 HOH A 75 575 61 HOH HOH . 
J 5 HOH A 76 576 12 HOH HOH . 
J 5 HOH A 77 577 51 HOH HOH . 
J 5 HOH A 78 578 84 HOH HOH . 
J 5 HOH A 79 579 47 HOH HOH . 
J 5 HOH A 80 580 53 HOH HOH . 
J 5 HOH A 81 581 116 HOH HOH . 
J 5 HOH A 82 582 154 HOH HOH . 
J 5 HOH A 83 583 44 HOH HOH . 
J 5 HOH A 84 584 78 HOH HOH . 
J 5 HOH A 85 585 142 HOH HOH . 
J 5 HOH A 86 586 70 HOH HOH . 
J 5 HOH A 87 587 58 HOH HOH . 
J 5 HOH A 88 588 7 HOH HOH . 
J 5 HOH A 89 589 138 HOH HOH . 
J 5 HOH A 90 590 63 HOH HOH . 
J 5 HOH A 91 591 25 HOH HOH . 
J 5 HOH A 92 592 118 HOH HOH . 
J 5 HOH A 93 593 133 HOH HOH . 
J 5 HOH A 94 594 166 HOH HOH . 
J 5 HOH A 95 595 62 HOH HOH . 
J 5 HOH A 96 596 69 HOH HOH . 
J 5 HOH A 97 597 155 HOH HOH . 
J 5 HOH A 98 598 113 HOH HOH . 
J 5 HOH A 99 599 144 HOH HOH . 
J 5 HOH A 100 600 167 HOH HOH . 
J 5 HOH A 101 601 66 HOH HOH . 
J 5 HOH A 102 602 46 HOH HOH . 
J 5 HOH A 103 603 95 HOH HOH . 
J 5 HOH A 104 604 158 HOH HOH . 
J 5 HOH A 105 605 152 HOH HOH . 
J 5 HOH A 106 606 38 HOH HOH . 
J 5 HOH A 107 607 161 HOH HOH . 
J 5 HOH A 108 608 149 HOH HOH . 
J 5 HOH A 109 609 43 HOH HOH . 
J 5 HOH A 110 610 179 HOH HOH . 
J 5 HOH A 111 611 50 HOH HOH . 
J 5 HOH A 112 612 104 HOH HOH . 
J 5 HOH A 113 613 162 HOH HOH . 
J 5 HOH A 114 614 31 HOH HOH . 
J 5 HOH A 115 615 5 HOH HOH . 
J 5 HOH A 116 616 101 HOH HOH . 
J 5 HOH A 117 617 74 HOH HOH . 
J 5 HOH A 118 618 145 HOH HOH . 
J 5 HOH A 119 619 135 HOH HOH . 
J 5 HOH A 120 620 173 HOH HOH . 
J 5 HOH A 121 621 97 HOH HOH . 
J 5 HOH A 122 622 168 HOH HOH . 
J 5 HOH A 123 623 105 HOH HOH . 
J 5 HOH A 124 624 129 HOH HOH . 
J 5 HOH A 125 625 80 HOH HOH . 
J 5 HOH A 126 626 147 HOH HOH . 
J 5 HOH A 127 627 16 HOH HOH . 
J 5 HOH A 128 628 121 HOH HOH . 
J 5 HOH A 129 629 103 HOH HOH . 
J 5 HOH A 130 630 178 HOH HOH . 
J 5 HOH A 131 631 24 HOH HOH . 
J 5 HOH A 132 632 119 HOH HOH . 
J 5 HOH A 133 633 82 HOH HOH . 
J 5 HOH A 134 634 120 HOH HOH . 
J 5 HOH A 135 635 114 HOH HOH . 
J 5 HOH A 136 636 32 HOH HOH . 
J 5 HOH A 137 637 122 HOH HOH . 
J 5 HOH A 138 638 86 HOH HOH . 
J 5 HOH A 139 639 175 HOH HOH . 
K 5 HOH B 1 201 35 HOH HOH . 
K 5 HOH B 2 202 128 HOH HOH . 
K 5 HOH B 3 203 156 HOH HOH . 
K 5 HOH B 4 204 49 HOH HOH . 
K 5 HOH B 5 205 106 HOH HOH . 
K 5 HOH B 6 206 110 HOH HOH . 
K 5 HOH B 7 207 180 HOH HOH . 
K 5 HOH B 8 208 100 HOH HOH . 
K 5 HOH B 9 209 9 HOH HOH . 
K 5 HOH B 10 210 6 HOH HOH . 
K 5 HOH B 11 211 143 HOH HOH . 
K 5 HOH B 12 212 42 HOH HOH . 
K 5 HOH B 13 213 148 HOH HOH . 
K 5 HOH B 14 214 68 HOH HOH . 
K 5 HOH B 15 215 13 HOH HOH . 
K 5 HOH B 16 216 146 HOH HOH . 
K 5 HOH B 17 217 33 HOH HOH . 
K 5 HOH B 18 218 125 HOH HOH . 
K 5 HOH B 19 219 71 HOH HOH . 
K 5 HOH B 20 220 102 HOH HOH . 
K 5 HOH B 21 221 57 HOH HOH . 
K 5 HOH B 22 222 90 HOH HOH . 
K 5 HOH B 23 223 109 HOH HOH . 
K 5 HOH B 24 224 126 HOH HOH . 
K 5 HOH B 25 225 117 HOH HOH . 
K 5 HOH B 26 226 157 HOH HOH . 
K 5 HOH B 27 227 67 HOH HOH . 
K 5 HOH B 28 228 127 HOH HOH . 
K 5 HOH B 29 229 56 HOH HOH . 
K 5 HOH B 30 230 139 HOH HOH . 
K 5 HOH B 31 231 112 HOH HOH . 
K 5 HOH B 32 232 174 HOH HOH . 
K 5 HOH B 33 233 150 HOH HOH . 
K 5 HOH B 34 234 93 HOH HOH . 
K 5 HOH B 35 235 130 HOH HOH . 
K 5 HOH B 36 236 164 HOH HOH . 
K 5 HOH B 37 237 108 HOH HOH . 
K 5 HOH B 38 238 64 HOH HOH . 
K 5 HOH B 39 239 123 HOH HOH . 
K 5 HOH B 40 240 170 HOH HOH . 
K 5 HOH B 41 241 153 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               17.445 
_atom_site.Cartn_y               3.821 
_atom_site.Cartn_z               -5.94 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.21 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#