data_5B77 # _model_server_result.job_id HcZX9Wj27g8-sEz5JGDDvw _model_server_result.datetime_utc '2024-11-22 21:16:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b77 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5B77 # _exptl.entry_id 5B77 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5B77 _cell.length_a 47.708 _cell.length_b 48.028 _cell.length_c 75.168 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B77 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLY 13 B GLY 13 1_555 B N PRK 14 B PRK 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 B C PRK 14 B PRK 14 1_555 B N ALA 15 B ALA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A SG CYS 17 A CYS 209 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 A SG CYS 20 A CYS 212 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc3 A SG CYS 38 A CYS 230 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 A SG CYS 41 A CYS 233 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc5 A ND1 HIS 46 A HIS 238 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc6 A SG CYS 49 A CYS 241 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc7 A SG CYS 67 A CYS 259 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc8 A SG CYS 70 A CYS 262 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc9 A SG CYS 73 A CYS 265 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc10 A SG CYS 76 A CYS 268 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc11 A SG CYS 89 A CYS 281 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc12 A SG CYS 92 A CYS 284 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc13 A ND1 HIS 97 A HIS 289 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc14 A SG CYS 100 A CYS 292 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc15 A SG CYS 115 A CYS 307 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc16 A SG CYS 118 A CYS 310 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5B77 _atom_sites.fract_transf_matrix[1][1] 0.020961 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020821 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 1 ZN ZN . D 3 ZN A 1 402 2 ZN ZN . E 3 ZN A 1 403 3 ZN ZN . F 3 ZN A 1 404 4 ZN ZN . G 4 SO4 A 1 405 1 SO4 SO4 . H 4 SO4 B 1 101 2 SO4 SO4 . I 5 HOH A 1 501 138 HOH HOH . I 5 HOH A 2 502 98 HOH HOH . I 5 HOH A 3 503 174 HOH HOH . I 5 HOH A 4 504 92 HOH HOH . I 5 HOH A 5 505 158 HOH HOH . I 5 HOH A 6 506 150 HOH HOH . I 5 HOH A 7 507 74 HOH HOH . I 5 HOH A 8 508 80 HOH HOH . I 5 HOH A 9 509 128 HOH HOH . I 5 HOH A 10 510 57 HOH HOH . I 5 HOH A 11 511 14 HOH HOH . I 5 HOH A 12 512 22 HOH HOH . I 5 HOH A 13 513 125 HOH HOH . I 5 HOH A 14 514 53 HOH HOH . I 5 HOH A 15 515 84 HOH HOH . I 5 HOH A 16 516 64 HOH HOH . I 5 HOH A 17 517 28 HOH HOH . I 5 HOH A 18 518 173 HOH HOH . I 5 HOH A 19 519 36 HOH HOH . I 5 HOH A 20 520 2 HOH HOH . I 5 HOH A 21 521 160 HOH HOH . I 5 HOH A 22 522 183 HOH HOH . I 5 HOH A 23 523 56 HOH HOH . I 5 HOH A 24 524 27 HOH HOH . I 5 HOH A 25 525 120 HOH HOH . I 5 HOH A 26 526 43 HOH HOH . I 5 HOH A 27 527 88 HOH HOH . I 5 HOH A 28 528 10 HOH HOH . I 5 HOH A 29 529 8 HOH HOH . I 5 HOH A 30 530 21 HOH HOH . I 5 HOH A 31 531 68 HOH HOH . I 5 HOH A 32 532 146 HOH HOH . I 5 HOH A 33 533 6 HOH HOH . I 5 HOH A 34 534 19 HOH HOH . I 5 HOH A 35 535 17 HOH HOH . I 5 HOH A 36 536 3 HOH HOH . I 5 HOH A 37 537 101 HOH HOH . I 5 HOH A 38 538 15 HOH HOH . I 5 HOH A 39 539 55 HOH HOH . I 5 HOH A 40 540 159 HOH HOH . I 5 HOH A 41 541 39 HOH HOH . I 5 HOH A 42 542 85 HOH HOH . I 5 HOH A 43 543 89 HOH HOH . I 5 HOH A 44 544 13 HOH HOH . I 5 HOH A 45 545 178 HOH HOH . I 5 HOH A 46 546 9 HOH HOH . I 5 HOH A 47 547 41 HOH HOH . I 5 HOH A 48 548 93 HOH HOH . I 5 HOH A 49 549 26 HOH HOH . I 5 HOH A 50 550 54 HOH HOH . I 5 HOH A 51 551 65 HOH HOH . I 5 HOH A 52 552 12 HOH HOH . I 5 HOH A 53 553 5 HOH HOH . I 5 HOH A 54 554 166 HOH HOH . I 5 HOH A 55 555 38 HOH HOH . I 5 HOH A 56 556 25 HOH HOH . I 5 HOH A 57 557 164 HOH HOH . I 5 HOH A 58 558 18 HOH HOH . I 5 HOH A 59 559 40 HOH HOH . I 5 HOH A 60 560 103 HOH HOH . I 5 HOH A 61 561 1 HOH HOH . I 5 HOH A 62 562 133 HOH HOH . I 5 HOH A 63 563 31 HOH HOH . I 5 HOH A 64 564 70 HOH HOH . I 5 HOH A 65 565 24 HOH HOH . I 5 HOH A 66 566 63 HOH HOH . I 5 HOH A 67 567 44 HOH HOH . I 5 HOH A 68 568 62 HOH HOH . I 5 HOH A 69 569 87 HOH HOH . I 5 HOH A 70 570 171 HOH HOH . I 5 HOH A 71 571 75 HOH HOH . I 5 HOH A 72 572 79 HOH HOH . I 5 HOH A 73 573 29 HOH HOH . I 5 HOH A 74 574 23 HOH HOH . I 5 HOH A 75 575 132 HOH HOH . I 5 HOH A 76 576 46 HOH HOH . I 5 HOH A 77 577 130 HOH HOH . I 5 HOH A 78 578 45 HOH HOH . I 5 HOH A 79 579 47 HOH HOH . I 5 HOH A 80 580 184 HOH HOH . I 5 HOH A 81 581 168 HOH HOH . I 5 HOH A 82 582 121 HOH HOH . I 5 HOH A 83 583 102 HOH HOH . I 5 HOH A 84 584 124 HOH HOH . I 5 HOH A 85 585 60 HOH HOH . I 5 HOH A 86 586 91 HOH HOH . I 5 HOH A 87 587 59 HOH HOH . I 5 HOH A 88 588 115 HOH HOH . I 5 HOH A 89 589 105 HOH HOH . I 5 HOH A 90 590 185 HOH HOH . I 5 HOH A 91 591 153 HOH HOH . I 5 HOH A 92 592 113 HOH HOH . I 5 HOH A 93 593 61 HOH HOH . I 5 HOH A 94 594 104 HOH HOH . I 5 HOH A 95 595 73 HOH HOH . I 5 HOH A 96 596 140 HOH HOH . I 5 HOH A 97 597 69 HOH HOH . I 5 HOH A 98 598 112 HOH HOH . I 5 HOH A 99 599 141 HOH HOH . I 5 HOH A 100 600 161 HOH HOH . I 5 HOH A 101 601 134 HOH HOH . I 5 HOH A 102 602 76 HOH HOH . I 5 HOH A 103 603 116 HOH HOH . I 5 HOH A 104 604 81 HOH HOH . I 5 HOH A 105 605 34 HOH HOH . I 5 HOH A 106 606 33 HOH HOH . I 5 HOH A 107 607 155 HOH HOH . I 5 HOH A 108 608 143 HOH HOH . I 5 HOH A 109 609 51 HOH HOH . I 5 HOH A 110 610 119 HOH HOH . I 5 HOH A 111 611 42 HOH HOH . I 5 HOH A 112 612 109 HOH HOH . I 5 HOH A 113 613 151 HOH HOH . I 5 HOH A 114 614 156 HOH HOH . I 5 HOH A 115 615 149 HOH HOH . I 5 HOH A 116 616 127 HOH HOH . I 5 HOH A 117 617 90 HOH HOH . I 5 HOH A 118 618 97 HOH HOH . I 5 HOH A 119 619 94 HOH HOH . I 5 HOH A 120 620 152 HOH HOH . I 5 HOH A 121 621 82 HOH HOH . I 5 HOH A 122 622 165 HOH HOH . I 5 HOH A 123 623 142 HOH HOH . I 5 HOH A 124 624 58 HOH HOH . I 5 HOH A 125 625 180 HOH HOH . I 5 HOH A 126 626 83 HOH HOH . I 5 HOH A 127 627 181 HOH HOH . I 5 HOH A 128 628 99 HOH HOH . I 5 HOH A 129 629 111 HOH HOH . I 5 HOH A 130 630 182 HOH HOH . I 5 HOH A 131 631 170 HOH HOH . I 5 HOH A 132 632 95 HOH HOH . I 5 HOH A 133 633 154 HOH HOH . I 5 HOH A 134 634 7 HOH HOH . I 5 HOH A 135 635 123 HOH HOH . I 5 HOH A 136 636 139 HOH HOH . I 5 HOH A 137 637 114 HOH HOH . I 5 HOH A 138 638 122 HOH HOH . I 5 HOH A 139 639 177 HOH HOH . I 5 HOH A 140 640 175 HOH HOH . I 5 HOH A 141 641 172 HOH HOH . I 5 HOH A 142 642 145 HOH HOH . I 5 HOH A 143 643 176 HOH HOH . I 5 HOH A 144 644 126 HOH HOH . I 5 HOH A 145 645 157 HOH HOH . J 5 HOH B 1 201 48 HOH HOH . J 5 HOH B 2 202 169 HOH HOH . J 5 HOH B 3 203 30 HOH HOH . J 5 HOH B 4 204 67 HOH HOH . J 5 HOH B 5 205 131 HOH HOH . J 5 HOH B 6 206 72 HOH HOH . J 5 HOH B 7 207 118 HOH HOH . J 5 HOH B 8 208 52 HOH HOH . J 5 HOH B 9 209 4 HOH HOH . J 5 HOH B 10 210 35 HOH HOH . J 5 HOH B 11 211 66 HOH HOH . J 5 HOH B 12 212 108 HOH HOH . J 5 HOH B 13 213 32 HOH HOH . J 5 HOH B 14 214 11 HOH HOH . J 5 HOH B 15 215 16 HOH HOH . J 5 HOH B 16 216 107 HOH HOH . J 5 HOH B 17 217 110 HOH HOH . J 5 HOH B 18 218 71 HOH HOH . J 5 HOH B 19 219 49 HOH HOH . J 5 HOH B 20 220 86 HOH HOH . J 5 HOH B 21 221 20 HOH HOH . J 5 HOH B 22 222 137 HOH HOH . J 5 HOH B 23 223 106 HOH HOH . J 5 HOH B 24 224 135 HOH HOH . J 5 HOH B 25 225 50 HOH HOH . J 5 HOH B 26 226 117 HOH HOH . J 5 HOH B 27 227 162 HOH HOH . J 5 HOH B 28 228 78 HOH HOH . J 5 HOH B 29 229 148 HOH HOH . J 5 HOH B 30 230 100 HOH HOH . J 5 HOH B 31 231 37 HOH HOH . J 5 HOH B 32 232 186 HOH HOH . J 5 HOH B 33 233 167 HOH HOH . J 5 HOH B 34 234 129 HOH HOH . J 5 HOH B 35 235 77 HOH HOH . J 5 HOH B 36 236 136 HOH HOH . J 5 HOH B 37 237 147 HOH HOH . J 5 HOH B 38 238 163 HOH HOH . J 5 HOH B 39 239 187 HOH HOH . J 5 HOH B 40 240 179 HOH HOH . J 5 HOH B 41 241 144 HOH HOH . J 5 HOH B 42 242 96 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.814 _atom_site.Cartn_y -5.559 _atom_site.Cartn_z 12.716 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #