data_5B7V
#
_model_server_result.job_id            Xn8_wYTAMly0YWvpz3RC9w 
_model_server_result.datetime_utc      '2024-11-22 04:32:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5b7v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":801}' 
#
_entry.id    5B7V 
#
_exptl.entry_id    5B7V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.381 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[5-amino-1-(2-methyl-1H-benzimidazol-6-yl)-1H-pyrazol-4-yl](1H-indol-2-yl)methanone' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.43 
_cell.angle_gamma         90 
_cell.entry_id            5B7V 
_cell.length_a            211.21 
_cell.length_b            56.75 
_cell.length_c            65.45 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5B7V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C20 H16 N6 O' 
_chem_comp.formula_weight    356.381 
_chem_comp.id                LWJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[5-amino-1-(2-methyl-1H-benzimidazol-6-yl)-1H-pyrazol-4-yl](1H-indol-2-yl)methanone' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C27 C4 LWJ sing 194 n n 
C4 N5 LWJ doub 195 n y 
C4 N3 LWJ sing 196 n y 
N5 C1 LWJ sing 197 n y 
N3 C2 LWJ sing 198 n y 
C1 C2 LWJ doub 199 n y 
C1 C24 LWJ sing 200 n y 
C2 C23 LWJ sing 201 n y 
C24 C25 LWJ doub 202 n y 
C23 C22 LWJ doub 203 n y 
C25 C22 LWJ sing 204 n y 
C22 N19 LWJ sing 205 n n 
N19 N18 LWJ sing 206 n y 
N19 C15 LWJ sing 207 n y 
N18 C17 LWJ doub 208 n y 
N26 C15 LWJ sing 209 n n 
C15 C16 LWJ doub 210 n y 
C17 C16 LWJ sing 211 n y 
C16 C20 LWJ sing 212 n n 
C20 O21 LWJ doub 213 n n 
C20 C12 LWJ sing 214 n n 
C12 N13 LWJ sing 215 n y 
C12 C14 LWJ doub 216 n y 
N13 C7 LWJ sing 217 n y 
C14 C6 LWJ sing 218 n y 
C7 C8 LWJ doub 219 n y 
C7 C6 LWJ sing 220 n y 
C8 C9 LWJ sing 221 n y 
C6 C11 LWJ doub 222 n y 
C9 C10 LWJ doub 223 n y 
C11 C10 LWJ sing 224 n y 
N3 H1 LWJ sing 225 n n 
C8 H3 LWJ sing 226 n n 
C9 H4 LWJ sing 227 n n 
C10 H5 LWJ sing 228 n n 
C11 H6 LWJ sing 229 n n 
N13 H7 LWJ sing 230 n n 
C14 H8 LWJ sing 231 n n 
C17 H9 LWJ sing 232 n n 
C23 H10 LWJ sing 233 n n 
C24 H11 LWJ sing 234 n n 
C25 H12 LWJ sing 235 n n 
N26 H13 LWJ sing 236 n n 
N26 H14 LWJ sing 237 n n 
C27 H15 LWJ sing 238 n n 
C27 H16 LWJ sing 239 n n 
C27 H17 LWJ sing 240 n n 
#
_atom_sites.entry_id                     5B7V 
_atom_sites.fract_transf_matrix[1][1]    0.004735 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001486 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017621 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016014 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 LWJ A 1 801 1 LWJ LWJ . 
D 3 SO4 A 1 802 1 SO4 SO4 . 
E 2 LWJ B 1 801 1 LWJ LWJ . 
F 4 HOH A 1 901 9 HOH HOH . 
F 4 HOH A 2 902 12 HOH HOH . 
F 4 HOH A 3 903 64 HOH HOH . 
F 4 HOH A 4 904 44 HOH HOH . 
F 4 HOH A 5 905 38 HOH HOH . 
F 4 HOH A 6 906 41 HOH HOH . 
F 4 HOH A 7 907 15 HOH HOH . 
F 4 HOH A 8 908 26 HOH HOH . 
F 4 HOH A 9 909 48 HOH HOH . 
F 4 HOH A 10 910 37 HOH HOH . 
F 4 HOH A 11 911 22 HOH HOH . 
F 4 HOH A 12 912 6 HOH HOH . 
F 4 HOH A 13 913 7 HOH HOH . 
F 4 HOH A 14 914 1 HOH HOH . 
F 4 HOH A 15 915 11 HOH HOH . 
F 4 HOH A 16 916 19 HOH HOH . 
F 4 HOH A 17 917 52 HOH HOH . 
F 4 HOH A 18 918 2 HOH HOH . 
F 4 HOH A 19 919 56 HOH HOH . 
F 4 HOH A 20 920 70 HOH HOH . 
F 4 HOH A 21 921 42 HOH HOH . 
F 4 HOH A 22 922 16 HOH HOH . 
F 4 HOH A 23 923 8 HOH HOH . 
F 4 HOH A 24 924 45 HOH HOH . 
F 4 HOH A 25 925 36 HOH HOH . 
F 4 HOH A 26 926 73 HOH HOH . 
F 4 HOH A 27 927 14 HOH HOH . 
F 4 HOH A 28 928 21 HOH HOH . 
F 4 HOH A 29 929 46 HOH HOH . 
F 4 HOH A 30 930 3 HOH HOH . 
F 4 HOH A 31 931 72 HOH HOH . 
F 4 HOH A 32 932 23 HOH HOH . 
F 4 HOH A 33 933 63 HOH HOH . 
F 4 HOH A 34 934 5 HOH HOH . 
F 4 HOH A 35 935 39 HOH HOH . 
F 4 HOH A 36 936 53 HOH HOH . 
F 4 HOH A 37 937 69 HOH HOH . 
F 4 HOH A 38 938 13 HOH HOH . 
F 4 HOH A 39 939 65 HOH HOH . 
F 4 HOH A 40 940 62 HOH HOH . 
F 4 HOH A 41 941 40 HOH HOH . 
F 4 HOH A 42 942 61 HOH HOH . 
F 4 HOH A 43 943 66 HOH HOH . 
F 4 HOH A 44 944 17 HOH HOH . 
F 4 HOH A 45 945 18 HOH HOH . 
F 4 HOH A 46 946 68 HOH HOH . 
F 4 HOH A 47 947 4 HOH HOH . 
F 4 HOH A 48 948 20 HOH HOH . 
F 4 HOH A 49 949 47 HOH HOH . 
F 4 HOH A 50 950 10 HOH HOH . 
F 4 HOH A 51 951 43 HOH HOH . 
F 4 HOH A 52 952 71 HOH HOH . 
G 4 HOH B 1 901 29 HOH HOH . 
G 4 HOH B 2 902 28 HOH HOH . 
G 4 HOH B 3 903 67 HOH HOH . 
G 4 HOH B 4 904 31 HOH HOH . 
G 4 HOH B 5 905 60 HOH HOH . 
G 4 HOH B 6 906 27 HOH HOH . 
G 4 HOH B 7 907 34 HOH HOH . 
G 4 HOH B 8 908 24 HOH HOH . 
G 4 HOH B 9 909 33 HOH HOH . 
G 4 HOH B 10 910 58 HOH HOH . 
G 4 HOH B 11 911 50 HOH HOH . 
G 4 HOH B 12 912 75 HOH HOH . 
G 4 HOH B 13 913 74 HOH HOH . 
G 4 HOH B 14 914 49 HOH HOH . 
G 4 HOH B 15 915 25 HOH HOH . 
G 4 HOH B 16 916 59 HOH HOH . 
G 4 HOH B 17 917 30 HOH HOH . 
G 4 HOH B 18 918 54 HOH HOH . 
G 4 HOH B 19 919 57 HOH HOH . 
G 4 HOH B 20 920 55 HOH HOH . 
G 4 HOH B 21 921 35 HOH HOH . 
G 4 HOH B 22 922 32 HOH HOH . 
G 4 HOH B 23 923 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LWJ . . . C 2 4.647 2.579 14.163 1 45.72 ? C1 LWJ 801 A 1 
HETATM 2 C C2 LWJ . . . C 2 5.727 1.721 14.548 1 46.22 ? C2 LWJ 801 A 1 
HETATM 3 N N3 LWJ . . . C 2 6.075 0.965 13.399 1 44.25 ? N3 LWJ 801 A 1 
HETATM 4 C C4 LWJ . . . C 2 5.249 1.427 12.373 1 45.17 ? C4 LWJ 801 A 1 
HETATM 5 N N5 LWJ . . . C 2 4.371 2.379 12.803 1 46.98 ? N5 LWJ 801 A 1 
HETATM 6 C C6 LWJ . . . C 2 9.259 2.462 23.99 1 52.56 ? C6 LWJ 801 A 1 
HETATM 7 C C7 LWJ . . . C 2 8.826 1.209 24.526 1 51.87 ? C7 LWJ 801 A 1 
HETATM 8 C C8 LWJ . . . C 2 9.275 0.716 25.788 1 51.74 ? C8 LWJ 801 A 1 
HETATM 9 C C9 LWJ . . . C 2 10.189 1.499 26.48 1 53.07 ? C9 LWJ 801 A 1 
HETATM 10 C C10 LWJ . . . C 2 10.647 2.749 25.957 1 53.9 ? C10 LWJ 801 A 1 
HETATM 11 C C11 LWJ . . . C 2 10.2 3.238 24.727 1 54.26 ? C11 LWJ 801 A 1 
HETATM 12 C C12 LWJ . . . C 2 7.751 1.555 22.555 1 48.72 ? C12 LWJ 801 A 1 
HETATM 13 N N13 LWJ . . . C 2 7.932 0.674 23.625 1 49.36 ? N13 LWJ 801 A 1 
HETATM 14 C C14 LWJ . . . C 2 8.59 2.64 22.728 1 49.77 ? C14 LWJ 801 A 1 
HETATM 15 C C15 LWJ . . . C 2 5.968 1.52 19.07 1 45.23 ? C15 LWJ 801 A 1 
HETATM 16 C C16 LWJ . . . C 2 6.731 1.928 20.214 1 48.44 ? C16 LWJ 801 A 1 
HETATM 17 C C17 LWJ . . . C 2 7.293 3.23 19.848 1 46.99 ? C17 LWJ 801 A 1 
HETATM 18 N N18 LWJ . . . C 2 6.902 3.61 18.632 1 44.77 ? N18 LWJ 801 A 1 
HETATM 19 N N19 LWJ . . . C 2 6.089 2.566 18.137 1 45.04 ? N19 LWJ 801 A 1 
HETATM 20 C C20 LWJ . . . C 2 6.875 1.141 21.43 1 46.18 ? C20 LWJ 801 A 1 
HETATM 21 O O21 LWJ . . . C 2 6.358 0.038 21.522 1 45.14 ? O21 LWJ 801 A 1 
HETATM 22 C C22 LWJ . . . C 2 5.568 2.572 16.795 1 45.7 ? C22 LWJ 801 A 1 
HETATM 23 C C23 LWJ . . . C 2 6.22 1.717 15.866 1 45.93 ? C23 LWJ 801 A 1 
HETATM 24 C C24 LWJ . . . C 2 4.018 3.451 15.118 1 46.25 ? C24 LWJ 801 A 1 
HETATM 25 C C25 LWJ . . . C 2 4.496 3.459 16.433 1 45.61 ? C25 LWJ 801 A 1 
HETATM 26 N N26 LWJ . . . C 2 5.276 0.365 18.872 1 41.97 ? N26 LWJ 801 A 1 
HETATM 27 C C27 LWJ . . . C 2 5.362 0.931 10.976 1 42.22 ? C27 LWJ 801 A 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#