data_5B8D # _model_server_result.job_id hUdfHe9u1UejCbXbf_nSSw _model_server_result.datetime_utc '2024-11-27 18:25:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5b8d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1306}' # _entry.id 5B8D # _exptl.entry_id 5B8D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.206 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(4-methyl-1,3-thiazol-2-yl)ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5B8D _cell.length_a 41.434 _cell.length_b 44.157 _cell.length_c 56.549 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5B8D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 7 A CYS 1113 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc2 A ND1 HIS 9 A HIS 1115 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc3 A SG CYS 27 A CYS 1133 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc4 A SG CYS 30 A CYS 1136 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc5 A SG CYS 39 A CYS 1145 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc6 A SG CYS 47 A CYS 1153 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc7 A O TYR 50 A TYR 1156 1_555 RA NA NA . A NA 1343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc8 A O ILE 51 A ILE 1157 1_555 RA NA NA . A NA 1343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc9 A ND1 HIS 54 A HIS 1160 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc10 A NE2 HIS 58 A HIS 1164 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc11 A ND1 HIS 64 A HIS 1170 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc12 A SG CYS 77 A CYS 1183 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc13 A SG CYS 80 A CYS 1186 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc14 RA NA NA . A NA 1343 1_555 SA O HOH . A HOH 1449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc15 RA NA NA . A NA 1343 1_555 SA O HOH . A HOH 1469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc16 RA NA NA . A NA 1343 1_555 SA O HOH . A HOH 1470 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? # _chem_comp.formula 'C6 H8 N2 O S' _chem_comp.formula_weight 156.206 _chem_comp.id 6T4 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(4-methyl-1,3-thiazol-2-yl)ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C2 6T4 doub 1 n n S C5 6T4 sing 2 n y S C3 6T4 sing 3 n y C5 C4 6T4 doub 4 n y C2 C1 6T4 sing 5 n n C2 N 6T4 sing 6 n n C4 C6 6T4 sing 7 n n C4 N1 6T4 sing 8 n y C3 N 6T4 sing 9 n n C3 N1 6T4 doub 10 n y C1 H4 6T4 sing 11 n n C1 H3 6T4 sing 12 n n C1 H1 6T4 sing 13 n n C5 H6 6T4 sing 14 n n C6 H7 6T4 sing 15 n n C6 H9 6T4 sing 16 n n C6 H8 6T4 sing 17 n n N H5 6T4 sing 18 n n # _atom_sites.entry_id 5B8D _atom_sites.fract_transf_matrix[1][1] 0.024135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022646 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1301 201 ZN ZN . C 2 ZN A 1 1302 202 ZN ZN . D 2 ZN A 1 1303 203 ZN ZN . E 3 FMT A 1 1304 1 FMT FMT . F 3 FMT A 1 1305 2 FMT FMT . G 4 6T4 A 1 1306 1 6T4 304 . H 5 UNX A 1 1307 1 UNX UNX . I 5 UNX A 1 1308 2 UNX UNX . J 5 UNX A 1 1309 3 UNX UNX . K 5 UNX A 1 1310 4 UNX UNX . L 5 UNX A 1 1311 5 UNX UNX . M 5 UNX A 1 1312 6 UNX UNX . N 5 UNX A 1 1313 7 UNX UNX . O 5 UNX A 1 1314 8 UNX UNX . P 5 UNX A 1 1315 9 UNX UNX . Q 5 UNX A 1 1316 10 UNX UNX . R 5 UNX A 1 1317 11 UNX UNX . S 5 UNX A 1 1318 12 UNX UNX . T 5 UNX A 1 1319 13 UNX UNX . U 5 UNX A 1 1320 14 UNX UNX . V 5 UNX A 1 1321 15 UNX UNX . W 5 UNX A 1 1322 16 UNX UNX . X 5 UNX A 1 1323 17 UNX UNX . Y 5 UNX A 1 1324 18 UNX UNX . Z 5 UNX A 1 1325 19 UNX UNX . AA 5 UNX A 1 1326 20 UNX UNX . BA 5 UNX A 1 1327 21 UNX UNX . CA 5 UNX A 1 1328 22 UNX UNX . DA 5 UNX A 1 1329 23 UNX UNX . EA 5 UNX A 1 1330 24 UNX UNX . FA 5 UNX A 1 1331 25 UNX UNX . GA 5 UNX A 1 1332 26 UNX UNX . HA 5 UNX A 1 1333 27 UNX UNX . IA 5 UNX A 1 1334 28 UNX UNX . JA 5 UNX A 1 1335 29 UNX UNX . KA 5 UNX A 1 1336 30 UNX UNX . LA 5 UNX A 1 1337 31 UNX UNX . MA 5 UNX A 1 1338 32 UNX UNX . NA 5 UNX A 1 1339 33 UNX UNX . OA 5 UNX A 1 1340 34 UNX UNX . PA 5 UNX A 1 1341 35 UNX UNX . QA 5 UNX A 1 1342 36 UNX UNX . RA 6 NA A 1 1343 1 NA NA . SA 7 HOH A 1 1401 14 HOH HOH . SA 7 HOH A 2 1402 45 HOH HOH . SA 7 HOH A 3 1403 30 HOH HOH . SA 7 HOH A 4 1404 32 HOH HOH . SA 7 HOH A 5 1405 43 HOH HOH . SA 7 HOH A 6 1406 7 HOH HOH . SA 7 HOH A 7 1407 27 HOH HOH . SA 7 HOH A 8 1408 48 HOH HOH . SA 7 HOH A 9 1409 66 HOH HOH . SA 7 HOH A 10 1410 71 HOH HOH . SA 7 HOH A 11 1411 54 HOH HOH . SA 7 HOH A 12 1412 9 HOH HOH . SA 7 HOH A 13 1413 74 HOH HOH . SA 7 HOH A 14 1414 20 HOH HOH . SA 7 HOH A 15 1415 39 HOH HOH . SA 7 HOH A 16 1416 4 HOH HOH . SA 7 HOH A 17 1417 1 HOH HOH . SA 7 HOH A 18 1418 35 HOH HOH . SA 7 HOH A 19 1419 62 HOH HOH . SA 7 HOH A 20 1420 31 HOH HOH . SA 7 HOH A 21 1421 49 HOH HOH . SA 7 HOH A 22 1422 13 HOH HOH . SA 7 HOH A 23 1423 26 HOH HOH . SA 7 HOH A 24 1424 12 HOH HOH . SA 7 HOH A 25 1425 22 HOH HOH . SA 7 HOH A 26 1426 47 HOH HOH . SA 7 HOH A 27 1427 8 HOH HOH . SA 7 HOH A 28 1428 50 HOH HOH . SA 7 HOH A 29 1429 18 HOH HOH . SA 7 HOH A 30 1430 6 HOH HOH . SA 7 HOH A 31 1431 19 HOH HOH . SA 7 HOH A 32 1432 25 HOH HOH . SA 7 HOH A 33 1433 16 HOH HOH . SA 7 HOH A 34 1434 34 HOH HOH . SA 7 HOH A 35 1435 69 HOH HOH . SA 7 HOH A 36 1436 3 HOH HOH . SA 7 HOH A 37 1437 75 HOH HOH . SA 7 HOH A 38 1438 73 HOH HOH . SA 7 HOH A 39 1439 40 HOH HOH . SA 7 HOH A 40 1440 28 HOH HOH . SA 7 HOH A 41 1441 33 HOH HOH . SA 7 HOH A 42 1442 56 HOH HOH . SA 7 HOH A 43 1443 38 HOH HOH . SA 7 HOH A 44 1444 17 HOH HOH . SA 7 HOH A 45 1445 63 HOH HOH . SA 7 HOH A 46 1446 21 HOH HOH . SA 7 HOH A 47 1447 36 HOH HOH . SA 7 HOH A 48 1448 68 HOH HOH . SA 7 HOH A 49 1449 41 HOH HOH . SA 7 HOH A 50 1450 10 HOH HOH . SA 7 HOH A 51 1451 65 HOH HOH . SA 7 HOH A 52 1452 59 HOH HOH . SA 7 HOH A 53 1453 5 HOH HOH . SA 7 HOH A 54 1454 67 HOH HOH . SA 7 HOH A 55 1455 44 HOH HOH . SA 7 HOH A 56 1456 2 HOH HOH . SA 7 HOH A 57 1457 79 HOH HOH . SA 7 HOH A 58 1458 60 HOH HOH . SA 7 HOH A 59 1459 24 HOH HOH . SA 7 HOH A 60 1460 46 HOH HOH . SA 7 HOH A 61 1461 29 HOH HOH . SA 7 HOH A 62 1462 23 HOH HOH . SA 7 HOH A 63 1463 53 HOH HOH . SA 7 HOH A 64 1464 15 HOH HOH . SA 7 HOH A 65 1465 57 HOH HOH . SA 7 HOH A 66 1466 11 HOH HOH . SA 7 HOH A 67 1467 72 HOH HOH . SA 7 HOH A 68 1468 64 HOH HOH . SA 7 HOH A 69 1469 70 HOH HOH . SA 7 HOH A 70 1470 61 HOH HOH . SA 7 HOH A 71 1471 76 HOH HOH . SA 7 HOH A 72 1472 51 HOH HOH . SA 7 HOH A 73 1473 52 HOH HOH . SA 7 HOH A 74 1474 37 HOH HOH . SA 7 HOH A 75 1475 55 HOH HOH . SA 7 HOH A 76 1476 58 HOH HOH . SA 7 HOH A 77 1477 78 HOH HOH . SA 7 HOH A 78 1478 42 HOH HOH . SA 7 HOH A 79 1479 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 6T4 . . . G 4 -2.509 0.131 14.417 0.81 18.54 ? C1 6T4 1306 A 1 HETATM 2 C C2 6T4 . . . G 4 -1.388 1.095 14.117 0.81 15.08 ? C2 6T4 1306 A 1 HETATM 3 C C3 6T4 . . . G 4 1.028 1.359 14.242 0.81 12.71 ? C3 6T4 1306 A 1 HETATM 4 C C4 6T4 . . . G 4 3.228 1.725 14.225 0.81 13.11 ? C4 6T4 1306 A 1 HETATM 5 C C5 6T4 . . . G 4 2.798 2.937 13.772 0.81 12.96 ? C5 6T4 1306 A 1 HETATM 6 C C6 6T4 . . . G 4 4.666 1.294 14.394 0.81 12.7 ? C6 6T4 1306 A 1 HETATM 7 O O 6T4 . . . G 4 -1.58 2.195 13.607 0.81 16.04 ? O 6T4 1306 A 1 HETATM 8 N N 6T4 . . . G 4 -0.138 0.641 14.456 0.81 14.08 ? N 6T4 1306 A 1 HETATM 9 S S 6T4 . . . G 4 1.067 2.985 13.633 0.81 13.49 ? S 6T4 1306 A 1 HETATM 10 N N1 6T4 . . . G 4 2.201 0.827 14.507 0.81 11.83 ? N1 6T4 1306 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #