data_5BQG # _model_server_result.job_id o3GXbBw-upxuW_4PVdfkkg _model_server_result.datetime_utc '2024-11-23 12:49:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5bqg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5BQG # _exptl.entry_id 5BQG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5BQG _cell.length_a 77.472 _cell.length_b 77.472 _cell.length_c 123.123 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BQG _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 211 n n N1 HN11 GSH sing 212 n n N1 HN12 GSH sing 213 n n CA1 C1 GSH sing 214 n n CA1 CB1 GSH sing 215 n n CA1 HA1 GSH sing 216 n n C1 O11 GSH doub 217 n n C1 O12 GSH sing 218 n n O12 H12 GSH sing 219 n n CB1 CG1 GSH sing 220 n n CB1 HB12 GSH sing 221 n n CB1 HB13 GSH sing 222 n n CG1 CD1 GSH sing 223 n n CG1 HG12 GSH sing 224 n n CG1 HG13 GSH sing 225 n n CD1 OE1 GSH doub 226 n n CD1 N2 GSH sing 227 n n N2 CA2 GSH sing 228 n n N2 HN2 GSH sing 229 n n CA2 C2 GSH sing 230 n n CA2 CB2 GSH sing 231 n n CA2 HA2 GSH sing 232 n n C2 O2 GSH doub 233 n n C2 N3 GSH sing 234 n n CB2 SG2 GSH sing 235 n n CB2 HB22 GSH sing 236 n n CB2 HB23 GSH sing 237 n n SG2 HSG GSH sing 238 n n N3 CA3 GSH sing 239 n n N3 HN3 GSH sing 240 n n CA3 C3 GSH sing 241 n n CA3 HA31 GSH sing 242 n n CA3 HA32 GSH sing 243 n n C3 O31 GSH doub 244 n n C3 O32 GSH sing 245 n n O32 H32 GSH sing 246 n n # _atom_sites.entry_id 5BQG _atom_sites.fract_transf_matrix[1][1] 0.012908 _atom_sites.fract_transf_matrix[1][2] 0.007452 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008122 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4UJ A 1 201 1 4UJ SX1 . C 3 GSH A 1 202 1 GSH GTT . D 4 JZR A 1 203 2 JZR BOG . E 5 BOG A 1 204 3 BOG BOG . F 6 PGE A 1 205 4 PGE PG4 . G 7 PEG A 1 206 5 PEG PG4 . H 8 HOH A 1 301 1 HOH HOH . H 8 HOH A 2 302 54 HOH HOH . H 8 HOH A 3 303 32 HOH HOH . H 8 HOH A 4 304 5 HOH HOH . H 8 HOH A 5 305 83 HOH HOH . H 8 HOH A 6 306 8 HOH HOH . H 8 HOH A 7 307 13 HOH HOH . H 8 HOH A 8 308 62 HOH HOH . H 8 HOH A 9 309 4 HOH HOH . H 8 HOH A 10 310 18 HOH HOH . H 8 HOH A 11 311 122 HOH HOH . H 8 HOH A 12 312 103 HOH HOH . H 8 HOH A 13 313 19 HOH HOH . H 8 HOH A 14 314 42 HOH HOH . H 8 HOH A 15 315 27 HOH HOH . H 8 HOH A 16 316 3 HOH HOH . H 8 HOH A 17 317 22 HOH HOH . H 8 HOH A 18 318 73 HOH HOH . H 8 HOH A 19 319 2 HOH HOH . H 8 HOH A 20 320 39 HOH HOH . H 8 HOH A 21 321 6 HOH HOH . H 8 HOH A 22 322 55 HOH HOH . H 8 HOH A 23 323 65 HOH HOH . H 8 HOH A 24 324 15 HOH HOH . H 8 HOH A 25 325 45 HOH HOH . H 8 HOH A 26 326 48 HOH HOH . H 8 HOH A 27 327 88 HOH HOH . H 8 HOH A 28 328 56 HOH HOH . H 8 HOH A 29 329 97 HOH HOH . H 8 HOH A 30 330 20 HOH HOH . H 8 HOH A 31 331 10 HOH HOH . H 8 HOH A 32 332 64 HOH HOH . H 8 HOH A 33 333 36 HOH HOH . H 8 HOH A 34 334 24 HOH HOH . H 8 HOH A 35 335 23 HOH HOH . H 8 HOH A 36 336 118 HOH HOH . H 8 HOH A 37 337 11 HOH HOH . H 8 HOH A 38 338 37 HOH HOH . H 8 HOH A 39 339 14 HOH HOH . H 8 HOH A 40 340 47 HOH HOH . H 8 HOH A 41 341 21 HOH HOH . H 8 HOH A 42 342 12 HOH HOH . H 8 HOH A 43 343 30 HOH HOH . H 8 HOH A 44 344 25 HOH HOH . H 8 HOH A 45 345 58 HOH HOH . H 8 HOH A 46 346 59 HOH HOH . H 8 HOH A 47 347 28 HOH HOH . H 8 HOH A 48 348 41 HOH HOH . H 8 HOH A 49 349 38 HOH HOH . H 8 HOH A 50 350 43 HOH HOH . H 8 HOH A 51 351 70 HOH HOH . H 8 HOH A 52 352 49 HOH HOH . H 8 HOH A 53 353 66 HOH HOH . H 8 HOH A 54 354 111 HOH HOH . H 8 HOH A 55 355 82 HOH HOH . H 8 HOH A 56 356 34 HOH HOH . H 8 HOH A 57 357 74 HOH HOH . H 8 HOH A 58 358 71 HOH HOH . H 8 HOH A 59 359 35 HOH HOH . H 8 HOH A 60 360 26 HOH HOH . H 8 HOH A 61 361 96 HOH HOH . H 8 HOH A 62 362 121 HOH HOH . H 8 HOH A 63 363 77 HOH HOH . H 8 HOH A 64 364 98 HOH HOH . H 8 HOH A 65 365 31 HOH HOH . H 8 HOH A 66 366 80 HOH HOH . H 8 HOH A 67 367 16 HOH HOH . H 8 HOH A 68 368 44 HOH HOH . H 8 HOH A 69 369 9 HOH HOH . H 8 HOH A 70 370 72 HOH HOH . H 8 HOH A 71 371 69 HOH HOH . H 8 HOH A 72 372 79 HOH HOH . H 8 HOH A 73 373 87 HOH HOH . H 8 HOH A 74 374 105 HOH HOH . H 8 HOH A 75 375 50 HOH HOH . H 8 HOH A 76 376 7 HOH HOH . H 8 HOH A 77 377 95 HOH HOH . H 8 HOH A 78 378 60 HOH HOH . H 8 HOH A 79 379 76 HOH HOH . H 8 HOH A 80 380 29 HOH HOH . H 8 HOH A 81 381 33 HOH HOH . H 8 HOH A 82 382 104 HOH HOH . H 8 HOH A 83 383 101 HOH HOH . H 8 HOH A 84 384 90 HOH HOH . H 8 HOH A 85 385 86 HOH HOH . H 8 HOH A 86 386 100 HOH HOH . H 8 HOH A 87 387 68 HOH HOH . H 8 HOH A 88 388 115 HOH HOH . H 8 HOH A 89 389 84 HOH HOH . H 8 HOH A 90 390 117 HOH HOH . H 8 HOH A 91 391 52 HOH HOH . H 8 HOH A 92 392 89 HOH HOH . H 8 HOH A 93 393 99 HOH HOH . H 8 HOH A 94 394 78 HOH HOH . H 8 HOH A 95 395 107 HOH HOH . H 8 HOH A 96 396 93 HOH HOH . H 8 HOH A 97 397 119 HOH HOH . H 8 HOH A 98 398 51 HOH HOH . H 8 HOH A 99 399 63 HOH HOH . H 8 HOH A 100 400 46 HOH HOH . H 8 HOH A 101 401 102 HOH HOH . H 8 HOH A 102 402 113 HOH HOH . H 8 HOH A 103 403 123 HOH HOH . H 8 HOH A 104 404 106 HOH HOH . H 8 HOH A 105 405 61 HOH HOH . H 8 HOH A 106 406 109 HOH HOH . H 8 HOH A 107 407 40 HOH HOH . H 8 HOH A 108 408 17 HOH HOH . H 8 HOH A 109 409 114 HOH HOH . H 8 HOH A 110 410 116 HOH HOH . H 8 HOH A 111 411 85 HOH HOH . H 8 HOH A 112 412 120 HOH HOH . H 8 HOH A 113 413 75 HOH HOH . H 8 HOH A 114 414 108 HOH HOH . H 8 HOH A 115 415 53 HOH HOH . H 8 HOH A 116 416 124 HOH HOH . H 8 HOH A 117 417 94 HOH HOH . H 8 HOH A 118 418 57 HOH HOH . H 8 HOH A 119 419 67 HOH HOH . H 8 HOH A 120 420 110 HOH HOH . H 8 HOH A 121 421 112 HOH HOH . H 8 HOH A 122 422 81 HOH HOH . H 8 HOH A 123 423 92 HOH HOH . H 8 HOH A 124 424 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . C 3 4.369 8.062 29.881 1 10.31 ? N1 GSH 202 A 1 HETATM 2 C CA1 GSH . . . C 3 5.588 8.911 30.001 1 9.31 ? CA1 GSH 202 A 1 HETATM 3 C C1 GSH . . . C 3 5.963 9.132 31.444 1 11.19 ? C1 GSH 202 A 1 HETATM 4 O O11 GSH . . . C 3 7.048 9.694 31.716 1 11.97 ? O11 GSH 202 A 1 HETATM 5 O O12 GSH . . . C 3 5.179 8.731 32.33 1 11.8 ? O12 GSH 202 A 1 HETATM 6 C CB1 GSH . . . C 3 5.338 10.215 29.239 1 10.26 ? CB1 GSH 202 A 1 HETATM 7 C CG1 GSH . . . C 3 6.569 11.107 29.041 1 9.4 ? CG1 GSH 202 A 1 HETATM 8 C CD1 GSH . . . C 3 7.795 10.341 28.582 1 8.67 ? CD1 GSH 202 A 1 HETATM 9 O OE1 GSH . . . C 3 7.717 9.505 27.695 1 10.68 ? OE1 GSH 202 A 1 HETATM 10 N N2 GSH . . . C 3 8.94 10.634 29.209 1 8.76 ? N2 GSH 202 A 1 HETATM 11 C CA2 GSH . . . C 3 10.202 9.969 28.913 1 8.69 ? CA2 GSH 202 A 1 HETATM 12 C C2 GSH . . . C 3 10.382 8.661 29.641 1 8.23 ? C2 GSH 202 A 1 HETATM 13 O O2 GSH . . . C 3 11.366 7.967 29.399 1 9.9 ? O2 GSH 202 A 1 HETATM 14 C CB2 GSH . . . C 3 11.376 10.903 29.226 1 11.03 ? CB2 GSH 202 A 1 HETATM 15 S SG2 GSH . . . C 3 11.476 11.39 30.97 1 11.96 ? SG2 GSH 202 A 1 HETATM 16 N N3 GSH . . . C 3 9.44 8.325 30.531 1 8.68 ? N3 GSH 202 A 1 HETATM 17 C CA3 GSH . . . C 3 9.548 7.164 31.402 1 10.71 ? CA3 GSH 202 A 1 HETATM 18 C C3 GSH . . . C 3 8.366 6.217 31.331 1 10.09 ? C3 GSH 202 A 1 HETATM 19 O O31 GSH . . . C 3 7.494 6.369 30.443 1 10.28 ? O31 GSH 202 A 1 HETATM 20 O O32 GSH . . . C 3 8.312 5.297 32.178 1 10.26 ? O32 GSH 202 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #