data_5BQI
#
_model_server_result.job_id            Yo1fJeWKVP6JWPHR2TtWqw 
_model_server_result.datetime_utc      '2024-10-18 19:28:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5bqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    5BQI 
#
_exptl.entry_id    5BQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5BQI 
_cell.length_a            76.335 
_cell.length_b            76.335 
_cell.length_c            123.561 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5BQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 143 n n 
C1 C2 BOG sing 144 n n 
C1 O5 BOG sing 145 n n 
C1 H1 BOG sing 146 n n 
O1 C1' BOG sing 147 n n 
C2 O2 BOG sing 148 n n 
C2 C3 BOG sing 149 n n 
C2 H2 BOG sing 150 n n 
O2 HO2 BOG sing 151 n n 
C3 O3 BOG sing 152 n n 
C3 C4 BOG sing 153 n n 
C3 H3 BOG sing 154 n n 
O3 HO3 BOG sing 155 n n 
C4 O4 BOG sing 156 n n 
C4 C5 BOG sing 157 n n 
C4 H4 BOG sing 158 n n 
O4 HO4 BOG sing 159 n n 
C5 O5 BOG sing 160 n n 
C5 C6 BOG sing 161 n n 
C5 H5 BOG sing 162 n n 
C6 O6 BOG sing 163 n n 
C6 H61 BOG sing 164 n n 
C6 H62 BOG sing 165 n n 
O6 HO6 BOG sing 166 n n 
C1' C2' BOG sing 167 n n 
C1' "H1'1" BOG sing 168 n n 
C1' "H1'2" BOG sing 169 n n 
C2' C3' BOG sing 170 n n 
C2' "H2'1" BOG sing 171 n n 
C2' "H2'2" BOG sing 172 n n 
C3' C4' BOG sing 173 n n 
C3' "H3'1" BOG sing 174 n n 
C3' "H3'2" BOG sing 175 n n 
C4' C5' BOG sing 176 n n 
C4' "H4'1" BOG sing 177 n n 
C4' "H4'2" BOG sing 178 n n 
C5' C6' BOG sing 179 n n 
C5' "H5'1" BOG sing 180 n n 
C5' "H5'2" BOG sing 181 n n 
C6' C7' BOG sing 182 n n 
C6' "H6'1" BOG sing 183 n n 
C6' "H6'2" BOG sing 184 n n 
C7' C8' BOG sing 185 n n 
C7' "H7'1" BOG sing 186 n n 
C7' "H7'2" BOG sing 187 n n 
C8' "H8'1" BOG sing 188 n n 
C8' "H8'2" BOG sing 189 n n 
C8' "H8'3" BOG sing 190 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     5BQI 
_atom_sites.fract_transf_matrix[1][1]    0.0131 
_atom_sites.fract_transf_matrix[1][2]    0.007563 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015127 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008093 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 4UL A 1 201 1 4UL SX1 . 
C 3 GSH A 1 202 1 GSH GTT . 
D 4 BOG A 1 203 2 BOG BOG . 
E 4 BOG A 1 204 3 BOG BOG . 
F 5 PG4 A 1 205 4 PG4 PG4 . 
G 6 1KA A 1 206 5 1KA PG4 . 
H 7 HOH A 1 301 1 HOH HOH . 
H 7 HOH A 2 302 28 HOH HOH . 
H 7 HOH A 3 303 15 HOH HOH . 
H 7 HOH A 4 304 52 HOH HOH . 
H 7 HOH A 5 305 3 HOH HOH . 
H 7 HOH A 6 306 64 HOH HOH . 
H 7 HOH A 7 307 49 HOH HOH . 
H 7 HOH A 8 308 6 HOH HOH . 
H 7 HOH A 9 309 48 HOH HOH . 
H 7 HOH A 10 310 72 HOH HOH . 
H 7 HOH A 11 311 31 HOH HOH . 
H 7 HOH A 12 312 39 HOH HOH . 
H 7 HOH A 13 313 18 HOH HOH . 
H 7 HOH A 14 314 7 HOH HOH . 
H 7 HOH A 15 315 37 HOH HOH . 
H 7 HOH A 16 316 20 HOH HOH . 
H 7 HOH A 17 317 24 HOH HOH . 
H 7 HOH A 18 318 8 HOH HOH . 
H 7 HOH A 19 319 42 HOH HOH . 
H 7 HOH A 20 320 33 HOH HOH . 
H 7 HOH A 21 321 16 HOH HOH . 
H 7 HOH A 22 322 9 HOH HOH . 
H 7 HOH A 23 323 5 HOH HOH . 
H 7 HOH A 24 324 56 HOH HOH . 
H 7 HOH A 25 325 59 HOH HOH . 
H 7 HOH A 26 326 25 HOH HOH . 
H 7 HOH A 27 327 65 HOH HOH . 
H 7 HOH A 28 328 40 HOH HOH . 
H 7 HOH A 29 329 29 HOH HOH . 
H 7 HOH A 30 330 21 HOH HOH . 
H 7 HOH A 31 331 44 HOH HOH . 
H 7 HOH A 32 332 14 HOH HOH . 
H 7 HOH A 33 333 63 HOH HOH . 
H 7 HOH A 34 334 38 HOH HOH . 
H 7 HOH A 35 335 13 HOH HOH . 
H 7 HOH A 36 336 11 HOH HOH . 
H 7 HOH A 37 337 17 HOH HOH . 
H 7 HOH A 38 338 4 HOH HOH . 
H 7 HOH A 39 339 22 HOH HOH . 
H 7 HOH A 40 340 35 HOH HOH . 
H 7 HOH A 41 341 55 HOH HOH . 
H 7 HOH A 42 342 68 HOH HOH . 
H 7 HOH A 43 343 61 HOH HOH . 
H 7 HOH A 44 344 32 HOH HOH . 
H 7 HOH A 45 345 19 HOH HOH . 
H 7 HOH A 46 346 58 HOH HOH . 
H 7 HOH A 47 347 57 HOH HOH . 
H 7 HOH A 48 348 51 HOH HOH . 
H 7 HOH A 49 349 10 HOH HOH . 
H 7 HOH A 50 350 41 HOH HOH . 
H 7 HOH A 51 351 47 HOH HOH . 
H 7 HOH A 52 352 54 HOH HOH . 
H 7 HOH A 53 353 45 HOH HOH . 
H 7 HOH A 54 354 50 HOH HOH . 
H 7 HOH A 55 355 2 HOH HOH . 
H 7 HOH A 56 356 62 HOH HOH . 
H 7 HOH A 57 357 67 HOH HOH . 
H 7 HOH A 58 358 12 HOH HOH . 
H 7 HOH A 59 359 36 HOH HOH . 
H 7 HOH A 60 360 27 HOH HOH . 
H 7 HOH A 61 361 60 HOH HOH . 
H 7 HOH A 62 362 46 HOH HOH . 
H 7 HOH A 63 363 23 HOH HOH . 
H 7 HOH A 64 364 53 HOH HOH . 
H 7 HOH A 65 365 43 HOH HOH . 
H 7 HOH A 66 366 69 HOH HOH . 
H 7 HOH A 67 367 71 HOH HOH . 
H 7 HOH A 68 368 66 HOH HOH . 
H 7 HOH A 69 369 73 HOH HOH . 
H 7 HOH A 70 370 30 HOH HOH . 
H 7 HOH A 71 371 70 HOH HOH . 
H 7 HOH A 72 372 34 HOH HOH . 
H 7 HOH A 73 373 26 HOH HOH . 
H 7 HOH A 74 374 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . E 4 23.223 -3.398 33.455 1 76.84 ? C1 BOG 204 A 1 
HETATM 2 O O1 BOG . . . E 4 22.922 -2.987 32.122 1 53.73 ? O1 BOG 204 A 1 
HETATM 3 C C2 BOG . . . E 4 24.353 -2.514 33.985 1 58.51 ? C2 BOG 204 A 1 
HETATM 4 O O2 BOG . . . E 4 25.56 -2.834 33.286 1 72.17 ? O2 BOG 204 A 1 
HETATM 5 C C3 BOG . . . E 4 24.585 -2.698 35.486 1 82.87 ? C3 BOG 204 A 1 
HETATM 6 O O3 BOG . . . E 4 25.4 -1.623 35.965 1 129.13 ? O3 BOG 204 A 1 
HETATM 7 C C4 BOG . . . E 4 23.285 -2.744 36.291 1 80.83 ? C4 BOG 204 A 1 
HETATM 8 O O4 BOG . . . E 4 23.573 -3.207 37.615 1 135.6 ? O4 BOG 204 A 1 
HETATM 9 C C5 BOG . . . E 4 22.256 -3.663 35.631 1 119.58 ? C5 BOG 204 A 1 
HETATM 10 O O5 BOG . . . E 4 22.057 -3.26 34.275 1 71.28 ? O5 BOG 204 A 1 
HETATM 11 C C6 BOG . . . E 4 20.913 -3.612 36.346 1 114.44 ? C6 BOG 204 A 1 
HETATM 12 O O6 BOG . . . E 4 20.131 -2.566 35.762 1 35.69 ? O6 BOG 204 A 1 
HETATM 13 C C1' BOG . . . E 4 21.875 -3.752 31.533 1 56.36 ? C1' BOG 204 A 1 
HETATM 14 C C2' BOG . . . E 4 21.328 -3.003 30.326 1 39.78 ? C2' BOG 204 A 1 
HETATM 15 C C3' BOG . . . E 4 20.72 -3.986 29.333 1 46.81 ? C3' BOG 204 A 1 
HETATM 16 C C4' BOG . . . E 4 19.998 -3.27 28.2 1 36.34 ? C4' BOG 204 A 1 
HETATM 17 C C5' BOG . . . E 4 19.216 -4.277 27.366 1 45.2 ? C5' BOG 204 A 1 
HETATM 18 C C6' BOG . . . E 4 19.054 -3.82 25.923 1 45.39 ? C6' BOG 204 A 1 
HETATM 19 C C7' BOG . . . E 4 17.935 -4.61 25.249 1 56.01 ? C7' BOG 204 A 1 
HETATM 20 C C8' BOG . . . E 4 17.581 -4.014 23.903 1 45.76 ? C8' BOG 204 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           20 
#