data_5BTU # _model_server_result.job_id l5cEG6NEIjpEgmicY7Mtrw _model_server_result.datetime_utc '2024-10-15 11:27:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5btu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5BTU # _exptl.entry_id 5BTU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5BTU _cell.length_a 47.379 _cell.length_b 47.379 _cell.length_c 131.209 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BTU _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 57 A CYS 57 1_555 A SG CYS 184 A CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 57 B CYS 57 1_555 B SG CYS 184 B CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A C LYS 108 A LYS 108 1_555 A N MSE 109 A MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A C MSE 109 A MSE 109 1_555 A N GLU 110 A GLU 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C HIS 112 A HIS 112 1_555 A N MSE 113 A MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 113 A MSE 113 1_555 A N TRP 114 A TRP 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 A C ALA 138 A ALA 138 1_555 A N MSE 139 A MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C MSE 139 A MSE 139 1_555 A N LEU 140 A LEU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale7 A C ARG 142 A ARG 142 1_555 A N MSE 143 A MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale8 A C MSE 143 A MSE 143 1_555 A N THR 144 A THR 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale9 A C PHE 162 A PHE 162 1_555 A N MSE 163 A MSE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale10 A C MSE 163 A MSE 163 1_555 A N THR 164 A THR 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale11 B C LYS 108 B LYS 108 1_555 B N MSE 109 B MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale12 B C MSE 109 B MSE 109 1_555 B N GLU 110 B GLU 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 B C HIS 112 B HIS 112 1_555 B N MSE 113 B MSE 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale14 B C MSE 113 B MSE 113 1_555 B N TRP 114 B TRP 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale15 B C ALA 138 B ALA 138 1_555 B N MSE 139 B MSE 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale16 B C MSE 139 B MSE 139 1_555 B N LEU 140 B LEU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale17 B C ARG 142 B ARG 142 1_555 B N MSE 143 B MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale18 B C MSE 143 B MSE 143 1_555 B N THR 144 B THR 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale19 B C PHE 162 B PHE 162 1_555 B N MSE 163 B MSE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale20 B C MSE 163 B MSE 163 1_555 B N THR 164 B THR 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 5BTU _atom_sites.fract_transf_matrix[1][1] 0.021106 _atom_sites.fract_transf_matrix[1][2] 0.012186 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 1 GOL GOL . D 3 PEG A 1 202 1 PEG PEG . E 3 PEG A 1 203 2 PEG PEG . F 3 PEG A 1 204 6 PEG PEG . G 3 PEG B 1 201 3 PEG PEG . H 3 PEG B 1 202 4 PEG PEG . I 3 PEG B 1 203 5 PEG PEG . J 4 HOH A 1 301 2 HOH HOH . J 4 HOH A 2 302 1 HOH HOH . J 4 HOH A 3 303 3 HOH HOH . J 4 HOH A 4 304 4 HOH HOH . J 4 HOH A 5 305 5 HOH HOH . K 4 HOH B 1 301 7 HOH HOH . K 4 HOH B 2 302 8 HOH HOH . K 4 HOH B 3 303 9 HOH HOH . K 4 HOH B 4 304 6 HOH HOH . K 4 HOH B 5 305 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 13.892 0.567 23.195 1 88.12 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 2 14.531 -0.2 24.219 1 89.07 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 2 14.196 0.036 21.785 1 89.25 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 2 13.181 0.444 20.877 1 89.98 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 2 15.52 0.509 21.159 1 83.95 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 2 15.472 0.169 19.75 1 62.17 ? O3 GOL 201 A 1 HETATM 7 H H11 GOL . . . C 2 14.222 1.604 23.266 1 105.74 ? H11 GOL 201 A 1 HETATM 8 H H12 GOL . . . C 2 12.814 0.553 23.358 1 105.74 ? H12 GOL 201 A 1 HETATM 9 H HO1 GOL . . . C 2 14.362 0.214 25.091 1 106.88 ? HO1 GOL 201 A 1 HETATM 10 H H2 GOL . . . C 2 14.216 -1.053 21.832 1 107.11 ? H2 GOL 201 A 1 HETATM 11 H HO2 GOL . . . C 2 13.211 1.418 20.77 1 107.98 ? HO2 GOL 201 A 1 HETATM 12 H H31 GOL . . . C 2 16.363 0.012 21.638 1 100.74 ? H31 GOL 201 A 1 HETATM 13 H H32 GOL . . . C 2 15.633 1.586 21.283 1 100.74 ? H32 GOL 201 A 1 HETATM 14 H HO3 GOL . . . C 2 15.79 -0.749 19.624 1 74.6 ? HO3 GOL 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #