data_5BU2
#
_model_server_result.job_id            SogQ_gSUzT5xAyJ00pYVsw 
_model_server_result.datetime_utc      '2025-04-14 02:08:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5bu2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":701}' 
#
_entry.id    5BU2 
#
_exptl.entry_id    5BU2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         89.87 
_cell.angle_beta          72.3 
_cell.angle_gamma         70.31 
_cell.entry_id            5BU2 
_cell.length_a            56.867 
_cell.length_b            69.707 
_cell.length_c            77.027 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5BU2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,K 1 1 
B,G,H,L 2 1 
C,I,M 3 1 
D,J,N 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 57 n n 
P O2P AMP sing 58 n n 
P O3P AMP sing 59 n n 
P O5' AMP sing 60 n n 
O2P HOP2 AMP sing 61 n n 
O3P HOP3 AMP sing 62 n n 
O5' C5' AMP sing 63 n n 
C5' C4' AMP sing 64 n n 
C5' "H5'1" AMP sing 65 n n 
C5' "H5'2" AMP sing 66 n n 
C4' O4' AMP sing 67 n n 
C4' C3' AMP sing 68 n n 
C4' H4' AMP sing 69 n n 
O4' C1' AMP sing 70 n n 
C3' O3' AMP sing 71 n n 
C3' C2' AMP sing 72 n n 
C3' H3' AMP sing 73 n n 
O3' HO3' AMP sing 74 n n 
C2' O2' AMP sing 75 n n 
C2' C1' AMP sing 76 n n 
C2' H2' AMP sing 77 n n 
O2' HO2' AMP sing 78 n n 
C1' N9 AMP sing 79 n n 
C1' H1' AMP sing 80 n n 
N9 C8 AMP sing 81 n y 
N9 C4 AMP sing 82 n y 
C8 N7 AMP doub 83 n y 
C8 H8 AMP sing 84 n n 
N7 C5 AMP sing 85 n y 
C5 C6 AMP sing 86 n y 
C5 C4 AMP doub 87 n y 
C6 N6 AMP sing 88 n n 
C6 N1 AMP doub 89 n y 
N6 HN61 AMP sing 90 n n 
N6 HN62 AMP sing 91 n n 
N1 C2 AMP sing 92 n y 
C2 N3 AMP doub 93 n y 
C2 H2 AMP sing 94 n n 
N3 C4 AMP sing 95 n y 
#
_atom_sites.entry_id                     5BU2 
_atom_sites.fract_transf_matrix[1][1]    0.017585 
_atom_sites.fract_transf_matrix[1][2]    -0.006292 
_atom_sites.fract_transf_matrix[1][3]    -0.006353 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015237 
_atom_sites.fract_transf_matrix[2][3]    0.001713 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013713 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ADP A 1 701 3 ADP ADP . 
F 2 ADP A 1 702 5 ADP ADP . 
G 3 AMP B 1 701 1 AMP AMP . 
H 2 ADP B 1 702 4 ADP ADP . 
I 2 ADP C 1 701 6 ADP ADP . 
J 4 RIB D 1 701 7 RIB RIB . 
K 5 HOH A 1 801 62 HOH HOH . 
K 5 HOH A 2 802 2 HOH HOH . 
K 5 HOH A 3 803 4 HOH HOH . 
K 5 HOH A 4 804 60 HOH HOH . 
K 5 HOH A 5 805 33 HOH HOH . 
K 5 HOH A 6 806 61 HOH HOH . 
K 5 HOH A 7 807 120 HOH HOH . 
K 5 HOH A 8 808 18 HOH HOH . 
K 5 HOH A 9 809 30 HOH HOH . 
K 5 HOH A 10 810 116 HOH HOH . 
K 5 HOH A 11 811 82 HOH HOH . 
K 5 HOH A 12 812 47 HOH HOH . 
K 5 HOH A 13 813 12 HOH HOH . 
K 5 HOH A 14 814 59 HOH HOH . 
K 5 HOH A 15 815 5 HOH HOH . 
K 5 HOH A 16 816 7 HOH HOH . 
K 5 HOH A 17 817 67 HOH HOH . 
K 5 HOH A 18 818 41 HOH HOH . 
K 5 HOH A 19 819 104 HOH HOH . 
K 5 HOH A 20 820 14 HOH HOH . 
K 5 HOH A 21 821 115 HOH HOH . 
K 5 HOH A 22 822 73 HOH HOH . 
K 5 HOH A 23 823 13 HOH HOH . 
K 5 HOH A 24 824 48 HOH HOH . 
K 5 HOH A 25 825 63 HOH HOH . 
K 5 HOH A 26 826 86 HOH HOH . 
K 5 HOH A 27 827 119 HOH HOH . 
K 5 HOH A 28 828 68 HOH HOH . 
K 5 HOH A 29 829 87 HOH HOH . 
K 5 HOH A 30 830 83 HOH HOH . 
K 5 HOH A 31 831 110 HOH HOH . 
K 5 HOH A 32 832 114 HOH HOH . 
K 5 HOH A 33 833 85 HOH HOH . 
K 5 HOH A 34 834 113 HOH HOH . 
L 5 HOH B 1 801 80 HOH HOH . 
L 5 HOH B 2 802 57 HOH HOH . 
L 5 HOH B 3 803 53 HOH HOH . 
L 5 HOH B 4 804 34 HOH HOH . 
L 5 HOH B 5 805 77 HOH HOH . 
L 5 HOH B 6 806 98 HOH HOH . 
L 5 HOH B 7 807 46 HOH HOH . 
L 5 HOH B 8 808 20 HOH HOH . 
L 5 HOH B 9 809 76 HOH HOH . 
L 5 HOH B 10 810 91 HOH HOH . 
L 5 HOH B 11 811 21 HOH HOH . 
L 5 HOH B 12 812 96 HOH HOH . 
L 5 HOH B 13 813 44 HOH HOH . 
L 5 HOH B 14 814 15 HOH HOH . 
L 5 HOH B 15 815 22 HOH HOH . 
L 5 HOH B 16 816 49 HOH HOH . 
L 5 HOH B 17 817 43 HOH HOH . 
L 5 HOH B 18 818 100 HOH HOH . 
L 5 HOH B 19 819 37 HOH HOH . 
L 5 HOH B 20 820 107 HOH HOH . 
L 5 HOH B 21 821 89 HOH HOH . 
L 5 HOH B 22 822 90 HOH HOH . 
L 5 HOH B 23 823 97 HOH HOH . 
L 5 HOH B 24 824 95 HOH HOH . 
L 5 HOH B 25 825 118 HOH HOH . 
L 5 HOH B 26 826 94 HOH HOH . 
L 5 HOH B 27 827 99 HOH HOH . 
L 5 HOH B 28 828 92 HOH HOH . 
M 5 HOH C 1 801 55 HOH HOH . 
M 5 HOH C 2 802 32 HOH HOH . 
M 5 HOH C 3 803 11 HOH HOH . 
M 5 HOH C 4 804 26 HOH HOH . 
M 5 HOH C 5 805 3 HOH HOH . 
M 5 HOH C 6 806 75 HOH HOH . 
M 5 HOH C 7 807 103 HOH HOH . 
M 5 HOH C 8 808 56 HOH HOH . 
M 5 HOH C 9 809 25 HOH HOH . 
M 5 HOH C 10 810 36 HOH HOH . 
M 5 HOH C 11 811 40 HOH HOH . 
M 5 HOH C 12 812 19 HOH HOH . 
M 5 HOH C 13 813 54 HOH HOH . 
M 5 HOH C 14 814 102 HOH HOH . 
M 5 HOH C 15 815 9 HOH HOH . 
M 5 HOH C 16 816 74 HOH HOH . 
M 5 HOH C 17 817 23 HOH HOH . 
M 5 HOH C 18 818 29 HOH HOH . 
M 5 HOH C 19 819 17 HOH HOH . 
M 5 HOH C 20 820 8 HOH HOH . 
M 5 HOH C 21 821 31 HOH HOH . 
M 5 HOH C 22 822 72 HOH HOH . 
M 5 HOH C 23 823 51 HOH HOH . 
M 5 HOH C 24 824 123 HOH HOH . 
M 5 HOH C 25 825 122 HOH HOH . 
M 5 HOH C 26 826 66 HOH HOH . 
M 5 HOH C 27 827 117 HOH HOH . 
M 5 HOH C 28 828 112 HOH HOH . 
M 5 HOH C 29 829 111 HOH HOH . 
N 5 HOH D 1 801 121 HOH HOH . 
N 5 HOH D 2 802 58 HOH HOH . 
N 5 HOH D 3 803 10 HOH HOH . 
N 5 HOH D 4 804 50 HOH HOH . 
N 5 HOH D 5 805 35 HOH HOH . 
N 5 HOH D 6 806 6 HOH HOH . 
N 5 HOH D 7 807 64 HOH HOH . 
N 5 HOH D 8 808 28 HOH HOH . 
N 5 HOH D 9 809 45 HOH HOH . 
N 5 HOH D 10 810 27 HOH HOH . 
N 5 HOH D 11 811 39 HOH HOH . 
N 5 HOH D 12 812 24 HOH HOH . 
N 5 HOH D 13 813 16 HOH HOH . 
N 5 HOH D 14 814 69 HOH HOH . 
N 5 HOH D 15 815 42 HOH HOH . 
N 5 HOH D 16 816 52 HOH HOH . 
N 5 HOH D 17 817 71 HOH HOH . 
N 5 HOH D 18 818 88 HOH HOH . 
N 5 HOH D 19 819 93 HOH HOH . 
N 5 HOH D 20 820 79 HOH HOH . 
N 5 HOH D 21 821 65 HOH HOH . 
N 5 HOH D 22 822 70 HOH HOH . 
N 5 HOH D 23 823 109 HOH HOH . 
N 5 HOH D 24 824 84 HOH HOH . 
N 5 HOH D 25 825 101 HOH HOH . 
N 5 HOH D 26 826 78 HOH HOH . 
N 5 HOH D 27 827 81 HOH HOH . 
N 5 HOH D 28 828 105 HOH HOH . 
N 5 HOH D 29 829 106 HOH HOH . 
N 5 HOH D 30 830 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . G 3 33.247 13.541 -45.092 0.5 44.49 ? P AMP 701 B 1 
HETATM 2 O O1P AMP . . . G 3 32.825 14.844 -45.714 0.5 43.58 ? O1P AMP 701 B 1 
HETATM 3 O O2P AMP . . . G 3 32.561 12.309 -45.622 0.5 40.49 ? O2P AMP 701 B 1 
HETATM 4 O O3P AMP . . . G 3 34.733 13.331 -44.912 0.5 44.31 ? O3P AMP 701 B 1 
HETATM 5 O O5' AMP . . . G 3 32.703 13.777 -43.603 1 48.14 ? O5' AMP 701 B 1 
HETATM 6 C C5' AMP . . . G 3 31.669 12.933 -43.125 1 51.28 ? C5' AMP 701 B 1 
HETATM 7 C C4' AMP . . . G 3 31.721 12.783 -41.618 1 53.3 ? C4' AMP 701 B 1 
HETATM 8 O O4' AMP . . . G 3 30.503 12.144 -41.222 1 56.66 ? O4' AMP 701 B 1 
HETATM 9 C C3' AMP . . . G 3 32.844 11.866 -41.171 1 54.08 ? C3' AMP 701 B 1 
HETATM 10 O O3' AMP . . . G 3 33.758 12.623 -40.388 1 51.23 ? O3' AMP 701 B 1 
HETATM 11 C C2' AMP . . . G 3 32.191 10.746 -40.371 1 53.79 ? C2' AMP 701 B 1 
HETATM 12 O O2' AMP . . . G 3 32.324 10.93 -38.957 1 56.25 ? O2' AMP 701 B 1 
HETATM 13 C C1' AMP . . . G 3 30.72 10.817 -40.725 1 55.67 ? C1' AMP 701 B 1 
HETATM 14 N N9 AMP . . . G 3 30.434 9.771 -41.747 1 57.94 ? N9 AMP 701 B 1 
HETATM 15 C C8 AMP . . . G 3 30.232 9.956 -43.07 1 60.09 ? C8 AMP 701 B 1 
HETATM 16 N N7 AMP . . . G 3 30.013 8.782 -43.718 1 60.56 ? N7 AMP 701 B 1 
HETATM 17 C C5 AMP . . . G 3 30.072 7.811 -42.791 1 60.36 ? C5 AMP 701 B 1 
HETATM 18 C C6 AMP . . . G 3 29.934 6.337 -42.777 1 60.04 ? C6 AMP 701 B 1 
HETATM 19 N N6 AMP . . . G 3 29.68 5.673 -43.921 1 62.37 ? N6 AMP 701 B 1 
HETATM 20 N N1 AMP . . . G 3 30.067 5.683 -41.599 1 60.82 ? N1 AMP 701 B 1 
HETATM 21 C C2 AMP . . . G 3 30.323 6.337 -40.45 1 59.75 ? C2 AMP 701 B 1 
HETATM 22 N N3 AMP . . . G 3 30.463 7.675 -40.393 1 60.29 ? N3 AMP 701 B 1 
HETATM 23 C C4 AMP . . . G 3 30.351 8.458 -41.501 1 59.16 ? C4 AMP 701 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#