data_5BUE
#
_model_server_result.job_id            h-eS4OwjWpq3znr7Hjzphg 
_model_server_result.datetime_utc      '2024-12-21 12:42:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5bue 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    5BUE 
#
_exptl.entry_id    5BUE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              383.446 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-benzyl-4-[3-(pyridin-4-yl)-2,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl]pyridin-2(1H)-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5BUE 
_cell.length_a            43.75 
_cell.length_b            71.36 
_cell.length_c            119.85 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5BUE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 126 A HIS 123 1_555 C NI NI . A NI 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc2 A SG CYS 162 A CYS 159 1_555 C NI NI . A NI 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
#
_chem_comp.formula           'C23 H21 N5 O' 
_chem_comp.formula_weight    383.446 
_chem_comp.id                4V8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-benzyl-4-[3-(pyridin-4-yl)-2,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl]pyridin-2(1H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C9 C8 4V8 sing 1 n n 
C9 C4 4V8 sing 2 n n 
C8 N7 4V8 sing 3 n n 
N5 C4 4V8 doub 4 n y 
N5 N1 4V8 sing 5 n y 
C4 C3 4V8 sing 6 n y 
O22 C20 4V8 doub 7 n n 
C21 C16 4V8 doub 8 n n 
C21 C20 4V8 sing 9 n n 
N7 C16 4V8 sing 10 n n 
N7 C6 4V8 sing 11 n n 
C27 C26 4V8 doub 12 n y 
C27 C28 4V8 sing 13 n y 
N1 C2 4V8 sing 14 n y 
C3 C6 4V8 sing 15 n n 
C3 C2 4V8 doub 16 n y 
C26 C25 4V8 sing 17 n y 
C28 C29 4V8 doub 18 n y 
C16 C17 4V8 sing 19 n n 
C20 N19 4V8 sing 20 n n 
C2 C10 4V8 sing 21 n n 
C25 C24 4V8 doub 22 n y 
C29 C24 4V8 sing 23 n y 
C24 C23 4V8 sing 24 n n 
N19 C23 4V8 sing 25 n n 
N19 C18 4V8 sing 26 n n 
C17 C18 4V8 doub 27 n n 
C11 C10 4V8 doub 28 n y 
C11 C12 4V8 sing 29 n y 
C10 C15 4V8 sing 30 n y 
C12 N13 4V8 doub 31 n y 
C15 C14 4V8 doub 32 n y 
N13 C14 4V8 sing 33 n y 
C11 H1 4V8 sing 34 n n 
C12 H2 4V8 sing 35 n n 
C14 H3 4V8 sing 36 n n 
C15 H4 4V8 sing 37 n n 
C17 H5 4V8 sing 38 n n 
C18 H6 4V8 sing 39 n n 
C21 H7 4V8 sing 40 n n 
C23 H8 4V8 sing 41 n n 
C23 H9 4V8 sing 42 n n 
C25 H10 4V8 sing 43 n n 
C26 H11 4V8 sing 44 n n 
C27 H12 4V8 sing 45 n n 
C28 H13 4V8 sing 46 n n 
C29 H14 4V8 sing 47 n n 
N1 H15 4V8 sing 48 n n 
C6 H16 4V8 sing 49 n n 
C6 H17 4V8 sing 50 n n 
C8 H18 4V8 sing 51 n n 
C8 H19 4V8 sing 52 n n 
C9 H20 4V8 sing 53 n n 
C9 H21 4V8 sing 54 n n 
#
_atom_sites.entry_id                     5BUE 
_atom_sites.fract_transf_matrix[1][1]    0.022857 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014013 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008344 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 4V8 A 1 401 1 4V8 LI1 . 
C 3 NI A 1 402 1 NI NI . 
D 4 HOH A 1 501 38 HOH HOH . 
D 4 HOH A 2 502 1 HOH HOH . 
D 4 HOH A 3 503 18 HOH HOH . 
D 4 HOH A 4 504 80 HOH HOH . 
D 4 HOH A 5 505 66 HOH HOH . 
D 4 HOH A 6 506 9 HOH HOH . 
D 4 HOH A 7 507 98 HOH HOH . 
D 4 HOH A 8 508 105 HOH HOH . 
D 4 HOH A 9 509 87 HOH HOH . 
D 4 HOH A 10 510 58 HOH HOH . 
D 4 HOH A 11 511 90 HOH HOH . 
D 4 HOH A 12 512 115 HOH HOH . 
D 4 HOH A 13 513 56 HOH HOH . 
D 4 HOH A 14 514 20 HOH HOH . 
D 4 HOH A 15 515 53 HOH HOH . 
D 4 HOH A 16 516 52 HOH HOH . 
D 4 HOH A 17 517 3 HOH HOH . 
D 4 HOH A 18 518 71 HOH HOH . 
D 4 HOH A 19 519 15 HOH HOH . 
D 4 HOH A 20 520 28 HOH HOH . 
D 4 HOH A 21 521 91 HOH HOH . 
D 4 HOH A 22 522 51 HOH HOH . 
D 4 HOH A 23 523 122 HOH HOH . 
D 4 HOH A 24 524 54 HOH HOH . 
D 4 HOH A 25 525 4 HOH HOH . 
D 4 HOH A 26 526 31 HOH HOH . 
D 4 HOH A 27 527 89 HOH HOH . 
D 4 HOH A 28 528 23 HOH HOH . 
D 4 HOH A 29 529 112 HOH HOH . 
D 4 HOH A 30 530 72 HOH HOH . 
D 4 HOH A 31 531 46 HOH HOH . 
D 4 HOH A 32 532 86 HOH HOH . 
D 4 HOH A 33 533 44 HOH HOH . 
D 4 HOH A 34 534 14 HOH HOH . 
D 4 HOH A 35 535 16 HOH HOH . 
D 4 HOH A 36 536 10 HOH HOH . 
D 4 HOH A 37 537 36 HOH HOH . 
D 4 HOH A 38 538 117 HOH HOH . 
D 4 HOH A 39 539 33 HOH HOH . 
D 4 HOH A 40 540 67 HOH HOH . 
D 4 HOH A 41 541 41 HOH HOH . 
D 4 HOH A 42 542 19 HOH HOH . 
D 4 HOH A 43 543 49 HOH HOH . 
D 4 HOH A 44 544 40 HOH HOH . 
D 4 HOH A 45 545 5 HOH HOH . 
D 4 HOH A 46 546 88 HOH HOH . 
D 4 HOH A 47 547 24 HOH HOH . 
D 4 HOH A 48 548 77 HOH HOH . 
D 4 HOH A 49 549 2 HOH HOH . 
D 4 HOH A 50 550 48 HOH HOH . 
D 4 HOH A 51 551 116 HOH HOH . 
D 4 HOH A 52 552 39 HOH HOH . 
D 4 HOH A 53 553 74 HOH HOH . 
D 4 HOH A 54 554 111 HOH HOH . 
D 4 HOH A 55 555 120 HOH HOH . 
D 4 HOH A 56 556 50 HOH HOH . 
D 4 HOH A 57 557 34 HOH HOH . 
D 4 HOH A 58 558 60 HOH HOH . 
D 4 HOH A 59 559 13 HOH HOH . 
D 4 HOH A 60 560 68 HOH HOH . 
D 4 HOH A 61 561 65 HOH HOH . 
D 4 HOH A 62 562 62 HOH HOH . 
D 4 HOH A 63 563 76 HOH HOH . 
D 4 HOH A 64 564 8 HOH HOH . 
D 4 HOH A 65 565 119 HOH HOH . 
D 4 HOH A 66 566 57 HOH HOH . 
D 4 HOH A 67 567 29 HOH HOH . 
D 4 HOH A 68 568 70 HOH HOH . 
D 4 HOH A 69 569 63 HOH HOH . 
D 4 HOH A 70 570 6 HOH HOH . 
D 4 HOH A 71 571 92 HOH HOH . 
D 4 HOH A 72 572 118 HOH HOH . 
D 4 HOH A 73 573 108 HOH HOH . 
D 4 HOH A 74 574 7 HOH HOH . 
D 4 HOH A 75 575 37 HOH HOH . 
D 4 HOH A 76 576 17 HOH HOH . 
D 4 HOH A 77 577 21 HOH HOH . 
D 4 HOH A 78 578 11 HOH HOH . 
D 4 HOH A 79 579 114 HOH HOH . 
D 4 HOH A 80 580 30 HOH HOH . 
D 4 HOH A 81 581 109 HOH HOH . 
D 4 HOH A 82 582 61 HOH HOH . 
D 4 HOH A 83 583 27 HOH HOH . 
D 4 HOH A 84 584 78 HOH HOH . 
D 4 HOH A 85 585 101 HOH HOH . 
D 4 HOH A 86 586 43 HOH HOH . 
D 4 HOH A 87 587 35 HOH HOH . 
D 4 HOH A 88 588 22 HOH HOH . 
D 4 HOH A 89 589 73 HOH HOH . 
D 4 HOH A 90 590 83 HOH HOH . 
D 4 HOH A 91 591 26 HOH HOH . 
D 4 HOH A 92 592 25 HOH HOH . 
D 4 HOH A 93 593 82 HOH HOH . 
D 4 HOH A 94 594 47 HOH HOH . 
D 4 HOH A 95 595 32 HOH HOH . 
D 4 HOH A 96 596 12 HOH HOH . 
D 4 HOH A 97 597 93 HOH HOH . 
D 4 HOH A 98 598 45 HOH HOH . 
D 4 HOH A 99 599 85 HOH HOH . 
D 4 HOH A 100 600 113 HOH HOH . 
D 4 HOH A 101 601 102 HOH HOH . 
D 4 HOH A 102 602 81 HOH HOH . 
D 4 HOH A 103 603 84 HOH HOH . 
D 4 HOH A 104 604 110 HOH HOH . 
D 4 HOH A 105 605 99 HOH HOH . 
D 4 HOH A 106 606 106 HOH HOH . 
D 4 HOH A 107 607 97 HOH HOH . 
D 4 HOH A 108 608 96 HOH HOH . 
D 4 HOH A 109 609 55 HOH HOH . 
D 4 HOH A 110 610 107 HOH HOH . 
D 4 HOH A 111 611 75 HOH HOH . 
D 4 HOH A 112 612 100 HOH HOH . 
D 4 HOH A 113 613 104 HOH HOH . 
D 4 HOH A 114 614 59 HOH HOH . 
D 4 HOH A 115 615 79 HOH HOH . 
D 4 HOH A 116 616 64 HOH HOH . 
D 4 HOH A 117 617 121 HOH HOH . 
D 4 HOH A 118 618 103 HOH HOH . 
D 4 HOH A 119 619 42 HOH HOH . 
D 4 HOH A 120 620 95 HOH HOH . 
D 4 HOH A 121 621 94 HOH HOH . 
D 4 HOH A 122 622 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 4V8 . . . B 2 17.82 -0.738 14.551 1 23.51 ? C2 4V8 401 A 1 
HETATM 2 C C3 4V8 . . . B 2 16.461 -0.851 14.024 1 22.04 ? C3 4V8 401 A 1 
HETATM 3 C C11 4V8 . . . B 2 19.908 -1.55 15.675 1 24.88 ? C11 4V8 401 A 1 
HETATM 4 C C12 4V8 . . . B 2 20.57 -2.249 16.689 1 24.67 ? C12 4V8 401 A 1 
HETATM 5 C C14 4V8 . . . B 2 18.502 -2.768 17.735 1 26.11 ? C14 4V8 401 A 1 
HETATM 6 C C15 4V8 . . . B 2 17.794 -2.097 16.728 1 25.66 ? C15 4V8 401 A 1 
HETATM 7 C C16 4V8 . . . B 2 12.911 -1.848 14.168 1 21.7 ? C16 4V8 401 A 1 
HETATM 8 C C17 4V8 . . . B 2 12.806 -2.578 15.47 1 19.38 ? C17 4V8 401 A 1 
HETATM 9 C C18 4V8 . . . B 2 11.633 -2.984 15.966 1 21.36 ? C18 4V8 401 A 1 
HETATM 10 C C20 4V8 . . . B 2 10.433 -2.002 14.17 1 21.73 ? C20 4V8 401 A 1 
HETATM 11 C C21 4V8 . . . B 2 11.713 -1.545 13.59 1 20.18 ? C21 4V8 401 A 1 
HETATM 12 C C23 4V8 . . . B 2 9.248 -3.334 15.923 1 24.13 ? C23 4V8 401 A 1 
HETATM 13 C C24 4V8 . . . B 2 8.894 -4.615 15.147 1 28.48 ? C24 4V8 401 A 1 
HETATM 14 C C25 4V8 . . . B 2 7.557 -4.86 14.762 1 30.97 ? C25 4V8 401 A 1 
HETATM 15 C C26 4V8 . . . B 2 7.213 -6.017 14.035 1 31.71 ? C26 4V8 401 A 1 
HETATM 16 C C27 4V8 . . . B 2 8.205 -6.95 13.674 1 33.85 ? C27 4V8 401 A 1 
HETATM 17 C C28 4V8 . . . B 2 9.546 -6.723 14.045 1 33.64 ? C28 4V8 401 A 1 
HETATM 18 C C29 4V8 . . . B 2 9.877 -5.56 14.776 1 31.44 ? C29 4V8 401 A 1 
HETATM 19 N N1 4V8 . . . B 2 18.392 0.127 13.824 1 24.09 ? N1 4V8 401 A 1 
HETATM 20 C C4 4V8 . . . B 2 16.405 0.027 13.004 1 21.8 ? C4 4V8 401 A 1 
HETATM 21 N N5 4V8 . . . B 2 17.554 0.609 12.884 1 21.62 ? N5 4V8 401 A 1 
HETATM 22 C C6 4V8 . . . B 2 15.319 -1.732 14.449 1 20.55 ? C6 4V8 401 A 1 
HETATM 23 N N7 4V8 . . . B 2 14.097 -1.522 13.657 1 21.42 ? N7 4V8 401 A 1 
HETATM 24 C C8 4V8 . . . B 2 14.258 -0.968 12.289 1 20.38 ? C8 4V8 401 A 1 
HETATM 25 C C9 4V8 . . . B 2 15.183 0.273 12.159 1 19.2 ? C9 4V8 401 A 1 
HETATM 26 C C10 4V8 . . . B 2 18.504 -1.477 15.684 1 24.91 ? C10 4V8 401 A 1 
HETATM 27 N N13 4V8 . . . B 2 19.854 -2.831 17.676 1 25.76 ? N13 4V8 401 A 1 
HETATM 28 N N19 4V8 . . . B 2 10.46 -2.752 15.319 1 22.62 ? N19 4V8 401 A 1 
HETATM 29 O O22 4V8 . . . B 2 9.428 -1.741 13.527 1 22.6 ? O22 4V8 401 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           29 
#