data_5BUH # _model_server_result.job_id o_ihiti0SA3zKgAZpuptCg _model_server_result.datetime_utc '2025-03-09 02:12:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5buh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5BUH # _exptl.entry_id 5BUH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 471.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1R,3S)-3-({5-fluoro-2-[5-fluoro-2-(hydroxymethyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]pyrimidin-4-yl}amino)cyclohexyl]pyrrolidine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5BUH _cell.length_a 81.801 _cell.length_b 81.801 _cell.length_c 55.598 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BUH _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H27 F2 N7 O2' _chem_comp.formula_weight 471.503 _chem_comp.id 4V7 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1R,3S)-3-({5-fluoro-2-[5-fluoro-2-(hydroxymethyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]pyrimidin-4-yl}amino)cyclohexyl]pyrrolidine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C7 4V7 sing 1 n n N1 C3 4V7 sing 2 n y N1 C6 4V7 sing 3 n y N C3 4V7 doub 4 n y N C2 4V7 sing 5 n y C7 C6 4V7 sing 6 n n C3 C4 4V7 sing 7 n y C2 C1 4V7 doub 8 n y C6 C5 4V7 doub 9 n y C4 C5 4V7 sing 10 n y C4 C 4V7 doub 11 n y C5 C8 4V7 sing 12 n n C1 C 4V7 sing 13 n y C1 F1 4V7 sing 14 n n N2 C8 4V7 doub 15 n y N2 C9 4V7 sing 16 n y C8 N3 4V7 sing 17 n y N3 C11 4V7 doub 18 n y C9 C10 4V7 doub 19 n y C11 C10 4V7 sing 20 n y C11 N4 4V7 sing 21 n n C10 F 4V7 sing 22 n n C12 N4 4V7 sing 23 n n C12 C13 4V7 sing 24 n n C12 C17 4V7 sing 25 n n O1 C18 4V7 doub 26 n n C13 C14 4V7 sing 27 n n C14 C15 4V7 sing 28 n n C17 C16 4V7 sing 29 n n C16 C15 4V7 sing 30 n n C16 N5 4V7 sing 31 n n C18 N5 4V7 sing 32 n n C18 N6 4V7 sing 33 n n C22 N6 4V7 sing 34 n n C22 C21 4V7 sing 35 n n N6 C19 4V7 sing 36 n n C21 C20 4V7 sing 37 n n C19 C20 4V7 sing 38 n n C H3 4V7 sing 39 n n O H7 4V7 sing 40 n n C2 H4 4V7 sing 41 n n N1 H 4V7 sing 42 n n C7 H6 4V7 sing 43 n n C7 H5 4V7 sing 44 n n C9 H8 4V7 sing 45 n n N4 H9 4V7 sing 46 n n C12 H1 4V7 sing 47 n n C17 H16 4V7 sing 48 n n C17 H17 4V7 sing 49 n n C16 H2 4V7 sing 50 n n C15 H15 4V7 sing 51 n n C15 H14 4V7 sing 52 n n C14 H13 4V7 sing 53 n n C14 H12 4V7 sing 54 n n C13 H10 4V7 sing 55 n n C13 H11 4V7 sing 56 n n N5 H18 4V7 sing 57 n n C22 H26 4V7 sing 58 n n C22 H25 4V7 sing 59 n n C21 H24 4V7 sing 60 n n C21 H23 4V7 sing 61 n n C20 H22 4V7 sing 62 n n C20 H21 4V7 sing 63 n n C19 H20 4V7 sing 64 n n C19 H19 4V7 sing 65 n n # _atom_sites.entry_id 5BUH _atom_sites.fract_transf_matrix[1][1] 0.012225 _atom_sites.fract_transf_matrix[1][2] 0.007058 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014116 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4V7 A 1 201 1 4V7 999 . C 3 HOH A 1 301 33 HOH HOH . C 3 HOH A 2 302 8 HOH HOH . C 3 HOH A 3 303 1 HOH HOH . C 3 HOH A 4 304 21 HOH HOH . C 3 HOH A 5 305 18 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 11 HOH HOH . C 3 HOH A 8 308 25 HOH HOH . C 3 HOH A 9 309 15 HOH HOH . C 3 HOH A 10 310 31 HOH HOH . C 3 HOH A 11 311 13 HOH HOH . C 3 HOH A 12 312 27 HOH HOH . C 3 HOH A 13 313 22 HOH HOH . C 3 HOH A 14 314 5 HOH HOH . C 3 HOH A 15 315 26 HOH HOH . C 3 HOH A 16 316 30 HOH HOH . C 3 HOH A 17 317 29 HOH HOH . C 3 HOH A 18 318 19 HOH HOH . C 3 HOH A 19 319 17 HOH HOH . C 3 HOH A 20 320 10 HOH HOH . C 3 HOH A 21 321 28 HOH HOH . C 3 HOH A 22 322 16 HOH HOH . C 3 HOH A 23 323 20 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 4 HOH HOH . C 3 HOH A 26 326 14 HOH HOH . C 3 HOH A 27 327 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N 4V7 . . . B 2 -47.117 -3.7 -1.007 1 42.63 ? N 4V7 201 A 1 HETATM 2 C C 4V7 . . . B 2 -47.815 -4.774 1.551 1 41.55 ? C 4V7 201 A 1 HETATM 3 O O 4V7 . . . B 2 -51.74 -1.615 -1.614 1 66.81 ? O 4V7 201 A 1 HETATM 4 F F1 4V7 . . . B 2 -45.598 -5.503 1.78 1 41.42 ? F1 4V7 201 A 1 HETATM 5 C C1 4V7 . . . B 2 -46.546 -4.866 1.042 1 40.48 ? C1 4V7 201 A 1 HETATM 6 C C2 4V7 . . . B 2 -46.192 -4.315 -0.253 1 41.72 ? C2 4V7 201 A 1 HETATM 7 C C3 4V7 . . . B 2 -48.353 -3.616 -0.483 1 43.67 ? C3 4V7 201 A 1 HETATM 8 N N1 4V7 . . . B 2 -49.443 -3.025 -1.08 1 44.32 ? N1 4V7 201 A 1 HETATM 9 C C6 4V7 . . . B 2 -50.517 -3.129 -0.223 1 49.28 ? C6 4V7 201 A 1 HETATM 10 C C7 4V7 . . . B 2 -51.85 -2.533 -0.557 1 58.46 ? C7 4V7 201 A 1 HETATM 11 C C5 4V7 . . . B 2 -50.174 -3.766 0.902 1 46.72 ? C5 4V7 201 A 1 HETATM 12 C C4 4V7 . . . B 2 -48.761 -4.111 0.767 1 44.22 ? C4 4V7 201 A 1 HETATM 13 C C8 4V7 . . . B 2 -51.02 -4.017 2.045 1 46.29 ? C8 4V7 201 A 1 HETATM 14 N N3 4V7 . . . B 2 -50.461 -4.641 3.082 1 45.53 ? N3 4V7 201 A 1 HETATM 15 C C11 4V7 . . . B 2 -51.207 -4.839 4.176 1 51.87 ? C11 4V7 201 A 1 HETATM 16 C C10 4V7 . . . B 2 -52.51 -4.337 4.22 1 52.52 ? C10 4V7 201 A 1 HETATM 17 F F 4V7 . . . B 2 -53.262 -4.362 5.343 1 60.93 ? F 4V7 201 A 1 HETATM 18 C C9 4V7 . . . B 2 -53.029 -3.73 3.102 1 46.98 ? C9 4V7 201 A 1 HETATM 19 N N2 4V7 . . . B 2 -52.296 -3.564 1.995 1 46.78 ? N2 4V7 201 A 1 HETATM 20 N N4 4V7 . . . B 2 -50.718 -5.555 5.194 1 58.82 ? N4 4V7 201 A 1 HETATM 21 C C12 4V7 . . . B 2 -49.404 -6.177 5.178 1 64 ? C12 4V7 201 A 1 HETATM 22 C C17 4V7 . . . B 2 -49.411 -7.399 6.095 1 68.14 ? C17 4V7 201 A 1 HETATM 23 C C16 4V7 . . . B 2 -48.05 -8.08 6.154 1 72.66 ? C16 4V7 201 A 1 HETATM 24 C C15 4V7 . . . B 2 -46.986 -7.092 6.594 1 67.53 ? C15 4V7 201 A 1 HETATM 25 C C14 4V7 . . . B 2 -46.958 -5.875 5.673 1 64.92 ? C14 4V7 201 A 1 HETATM 26 C C13 4V7 . . . B 2 -48.322 -5.195 5.594 1 63.78 ? C13 4V7 201 A 1 HETATM 27 N N5 4V7 . . . B 2 -48.116 -9.219 7.064 1 81.53 ? N5 4V7 201 A 1 HETATM 28 C C18 4V7 . . . B 2 -48.446 -10.469 6.651 1 87.27 ? C18 4V7 201 A 1 HETATM 29 O O1 4V7 . . . B 2 -48.423 -10.817 5.473 1 85.2 ? O1 4V7 201 A 1 HETATM 30 N N6 4V7 . . . B 2 -48.809 -11.322 7.654 1 92.17 ? N6 4V7 201 A 1 HETATM 31 C C22 4V7 . . . B 2 -49.15 -12.72 7.342 1 94.43 ? C22 4V7 201 A 1 HETATM 32 C C21 4V7 . . . B 2 -49.993 -13.154 8.527 1 95.41 ? C21 4V7 201 A 1 HETATM 33 C C20 4V7 . . . B 2 -49.487 -12.334 9.669 1 94.57 ? C20 4V7 201 A 1 HETATM 34 C C19 4V7 . . . B 2 -49.15 -10.991 9.052 1 93.7 ? C19 4V7 201 A 1 HETATM 35 H H3 4V7 . . . B 2 -48.054 -5.208 2.521 1 41.48 ? H3 4V7 201 A 1 HETATM 36 H H7 4V7 . . . B 2 -51.812 -0.709 -1.216 1 67.55 ? H7 4V7 201 A 1 HETATM 37 H H4 4V7 . . . B 2 -45.176 -4.38 -0.638 1 41.66 ? H4 4V7 201 A 1 HETATM 38 H H 4V7 . . . B 2 -49.449 -2.587 -1.994 1 43.85 ? H 4V7 201 A 1 HETATM 39 H H6 4V7 . . . B 2 -52.565 -3.332 -0.745 1 58.52 ? H6 4V7 201 A 1 HETATM 40 H H5 4V7 . . . B 2 -52.222 -1.95 0.285 1 57.57 ? H5 4V7 201 A 1 HETATM 41 H H8 4V7 . . . B 2 -54.055 -3.366 3.076 1 46.64 ? H8 4V7 201 A 1 HETATM 42 H H9 4V7 . . . B 2 -51.292 -5.677 6.022 1 58.9 ? H9 4V7 201 A 1 HETATM 43 H H1 4V7 . . . B 2 -49.174 -6.526 4.173 1 64.09 ? H1 4V7 201 A 1 HETATM 44 H H16 4V7 . . . B 2 -50.19 -8.103 5.806 1 67.78 ? H16 4V7 201 A 1 HETATM 45 H H17 4V7 . . . B 2 -49.687 -7.091 7.102 1 68.29 ? H17 4V7 201 A 1 HETATM 46 H H2 4V7 . . . B 2 -47.802 -8.43 5.153 1 72.58 ? H2 4V7 201 A 1 HETATM 47 H H15 4V7 . . . B 2 -46.003 -7.552 6.668 1 67.22 ? H15 4V7 201 A 1 HETATM 48 H H14 4V7 . . . B 2 -47.204 -6.771 7.611 1 67.57 ? H14 4V7 201 A 1 HETATM 49 H H13 4V7 . . . B 2 -46.675 -6.196 4.671 1 64.99 ? H13 4V7 201 A 1 HETATM 50 H H12 4V7 . . . B 2 -46.168 -5.173 5.933 1 64.69 ? H12 4V7 201 A 1 HETATM 51 H H10 4V7 . . . B 2 -48.287 -4.346 4.913 1 63.72 ? H10 4V7 201 A 1 HETATM 52 H H11 4V7 . . . B 2 -48.587 -4.755 6.555 1 63.93 ? H11 4V7 201 A 1 HETATM 53 H H18 4V7 . . . B 2 -47.883 -8.999 8.027 1 81.61 ? H18 4V7 201 A 1 HETATM 54 H H26 4V7 . . . B 2 -49.679 -12.835 6.397 1 94.48 ? H26 4V7 201 A 1 HETATM 55 H H25 4V7 . . . B 2 -48.234 -13.295 7.222 1 94.6 ? H25 4V7 201 A 1 HETATM 56 H H24 4V7 . . . B 2 -51.055 -12.996 8.344 1 95.65 ? H24 4V7 201 A 1 HETATM 57 H H23 4V7 . . . B 2 -49.896 -14.223 8.714 1 95.62 ? H23 4V7 201 A 1 HETATM 58 H H22 4V7 . . . B 2 -48.607 -12.778 10.134 1 94.48 ? H22 4V7 201 A 1 HETATM 59 H H21 4V7 . . . B 2 -50.209 -12.259 10.48 1 94.47 ? H21 4V7 201 A 1 HETATM 60 H H20 4V7 . . . B 2 -49.983 -10.294 9.131 1 93.65 ? H20 4V7 201 A 1 HETATM 61 H H19 4V7 . . . B 2 -48.308 -10.523 9.56 1 93.59 ? H19 4V7 201 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 61 #