data_5BUI # _model_server_result.job_id c74vHEei_WldYbBweakMbA _model_server_result.datetime_utc '2024-12-22 03:13:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5bui # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5BUI # _exptl.entry_id 5BUI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5BUI _cell.length_a 43.83 _cell.length_b 71.25 _cell.length_c 120.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 126 A HIS 123 1_555 B NI NI . A NI 401 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc2 A SG CYS 162 A CYS 159 1_555 B NI NI . A NI 401 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc3 A ND1 HIS 179 A HIS 176 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5BUI _atom_sites.fract_transf_matrix[1][1] 0.022815 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014035 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 401 1 NI NI . C 3 4V9 A 1 402 1 4V9 LI1 . D 4 HOH A 1 501 240 HOH HOH . D 4 HOH A 2 502 107 HOH HOH . D 4 HOH A 3 503 65 HOH HOH . D 4 HOH A 4 504 313 HOH HOH . D 4 HOH A 5 505 13 HOH HOH . D 4 HOH A 6 506 43 HOH HOH . D 4 HOH A 7 507 142 HOH HOH . D 4 HOH A 8 508 110 HOH HOH . D 4 HOH A 9 509 255 HOH HOH . D 4 HOH A 10 510 311 HOH HOH . D 4 HOH A 11 511 451 HOH HOH . D 4 HOH A 12 512 30 HOH HOH . D 4 HOH A 13 513 224 HOH HOH . D 4 HOH A 14 514 175 HOH HOH . D 4 HOH A 15 515 63 HOH HOH . D 4 HOH A 16 516 168 HOH HOH . D 4 HOH A 17 517 247 HOH HOH . D 4 HOH A 18 518 160 HOH HOH . D 4 HOH A 19 519 95 HOH HOH . D 4 HOH A 20 520 145 HOH HOH . D 4 HOH A 21 521 76 HOH HOH . D 4 HOH A 22 522 24 HOH HOH . D 4 HOH A 23 523 280 HOH HOH . D 4 HOH A 24 524 300 HOH HOH . D 4 HOH A 25 525 62 HOH HOH . D 4 HOH A 26 526 50 HOH HOH . D 4 HOH A 27 527 25 HOH HOH . D 4 HOH A 28 528 129 HOH HOH . D 4 HOH A 29 529 85 HOH HOH . D 4 HOH A 30 530 26 HOH HOH . D 4 HOH A 31 531 141 HOH HOH . D 4 HOH A 32 532 176 HOH HOH . D 4 HOH A 33 533 334 HOH HOH . D 4 HOH A 34 534 260 HOH HOH . D 4 HOH A 35 535 77 HOH HOH . D 4 HOH A 36 536 57 HOH HOH . D 4 HOH A 37 537 273 HOH HOH . D 4 HOH A 38 538 197 HOH HOH . D 4 HOH A 39 539 226 HOH HOH . D 4 HOH A 40 540 64 HOH HOH . D 4 HOH A 41 541 444 HOH HOH . D 4 HOH A 42 542 12 HOH HOH . D 4 HOH A 43 543 29 HOH HOH . D 4 HOH A 44 544 6 HOH HOH . D 4 HOH A 45 545 164 HOH HOH . D 4 HOH A 46 546 47 HOH HOH . D 4 HOH A 47 547 244 HOH HOH . D 4 HOH A 48 548 174 HOH HOH . D 4 HOH A 49 549 114 HOH HOH . D 4 HOH A 50 550 239 HOH HOH . D 4 HOH A 51 551 196 HOH HOH . D 4 HOH A 52 552 195 HOH HOH . D 4 HOH A 53 553 58 HOH HOH . D 4 HOH A 54 554 27 HOH HOH . D 4 HOH A 55 555 61 HOH HOH . D 4 HOH A 56 556 67 HOH HOH . D 4 HOH A 57 557 146 HOH HOH . D 4 HOH A 58 558 200 HOH HOH . D 4 HOH A 59 559 384 HOH HOH . D 4 HOH A 60 560 134 HOH HOH . D 4 HOH A 61 561 93 HOH HOH . D 4 HOH A 62 562 69 HOH HOH . D 4 HOH A 63 563 207 HOH HOH . D 4 HOH A 64 564 80 HOH HOH . D 4 HOH A 65 565 147 HOH HOH . D 4 HOH A 66 566 46 HOH HOH . D 4 HOH A 67 567 32 HOH HOH . D 4 HOH A 68 568 241 HOH HOH . D 4 HOH A 69 569 21 HOH HOH . D 4 HOH A 70 570 120 HOH HOH . D 4 HOH A 71 571 131 HOH HOH . D 4 HOH A 72 572 7 HOH HOH . D 4 HOH A 73 573 84 HOH HOH . D 4 HOH A 74 574 54 HOH HOH . D 4 HOH A 75 575 225 HOH HOH . D 4 HOH A 76 576 295 HOH HOH . D 4 HOH A 77 577 105 HOH HOH . D 4 HOH A 78 578 52 HOH HOH . D 4 HOH A 79 579 249 HOH HOH . D 4 HOH A 80 580 3 HOH HOH . D 4 HOH A 81 581 75 HOH HOH . D 4 HOH A 82 582 44 HOH HOH . D 4 HOH A 83 583 16 HOH HOH . D 4 HOH A 84 584 169 HOH HOH . D 4 HOH A 85 585 37 HOH HOH . D 4 HOH A 86 586 123 HOH HOH . D 4 HOH A 87 587 70 HOH HOH . D 4 HOH A 88 588 34 HOH HOH . D 4 HOH A 89 589 323 HOH HOH . D 4 HOH A 90 590 177 HOH HOH . D 4 HOH A 91 591 243 HOH HOH . D 4 HOH A 92 592 445 HOH HOH . D 4 HOH A 93 593 116 HOH HOH . D 4 HOH A 94 594 83 HOH HOH . D 4 HOH A 95 595 159 HOH HOH . D 4 HOH A 96 596 14 HOH HOH . D 4 HOH A 97 597 157 HOH HOH . D 4 HOH A 98 598 450 HOH HOH . D 4 HOH A 99 599 259 HOH HOH . D 4 HOH A 100 600 186 HOH HOH . D 4 HOH A 101 601 109 HOH HOH . D 4 HOH A 102 602 45 HOH HOH . D 4 HOH A 103 603 433 HOH HOH . D 4 HOH A 104 604 162 HOH HOH . D 4 HOH A 105 605 100 HOH HOH . D 4 HOH A 106 606 88 HOH HOH . D 4 HOH A 107 607 322 HOH HOH . D 4 HOH A 108 608 206 HOH HOH . D 4 HOH A 109 609 111 HOH HOH . D 4 HOH A 110 610 238 HOH HOH . D 4 HOH A 111 611 366 HOH HOH . D 4 HOH A 112 612 201 HOH HOH . D 4 HOH A 113 613 4 HOH HOH . D 4 HOH A 114 614 299 HOH HOH . D 4 HOH A 115 615 262 HOH HOH . D 4 HOH A 116 616 17 HOH HOH . D 4 HOH A 117 617 138 HOH HOH . D 4 HOH A 118 618 227 HOH HOH . D 4 HOH A 119 619 210 HOH HOH . D 4 HOH A 120 620 72 HOH HOH . D 4 HOH A 121 621 437 HOH HOH . D 4 HOH A 122 622 78 HOH HOH . D 4 HOH A 123 623 212 HOH HOH . D 4 HOH A 124 624 23 HOH HOH . D 4 HOH A 125 625 66 HOH HOH . D 4 HOH A 126 626 108 HOH HOH . D 4 HOH A 127 627 49 HOH HOH . D 4 HOH A 128 628 15 HOH HOH . D 4 HOH A 129 629 28 HOH HOH . D 4 HOH A 130 630 38 HOH HOH . D 4 HOH A 131 631 1 HOH HOH . D 4 HOH A 132 632 130 HOH HOH . D 4 HOH A 133 633 53 HOH HOH . D 4 HOH A 134 634 150 HOH HOH . D 4 HOH A 135 635 10 HOH HOH . D 4 HOH A 136 636 435 HOH HOH . D 4 HOH A 137 637 2 HOH HOH . D 4 HOH A 138 638 208 HOH HOH . D 4 HOH A 139 639 163 HOH HOH . D 4 HOH A 140 640 148 HOH HOH . D 4 HOH A 141 641 222 HOH HOH . D 4 HOH A 142 642 294 HOH HOH . D 4 HOH A 143 643 432 HOH HOH . D 4 HOH A 144 644 74 HOH HOH . D 4 HOH A 145 645 5 HOH HOH . D 4 HOH A 146 646 20 HOH HOH . D 4 HOH A 147 647 430 HOH HOH . D 4 HOH A 148 648 41 HOH HOH . D 4 HOH A 149 649 97 HOH HOH . D 4 HOH A 150 650 121 HOH HOH . D 4 HOH A 151 651 446 HOH HOH . D 4 HOH A 152 652 151 HOH HOH . D 4 HOH A 153 653 228 HOH HOH . D 4 HOH A 154 654 242 HOH HOH . D 4 HOH A 155 655 215 HOH HOH . D 4 HOH A 156 656 18 HOH HOH . D 4 HOH A 157 657 429 HOH HOH . D 4 HOH A 158 658 309 HOH HOH . D 4 HOH A 159 659 443 HOH HOH . D 4 HOH A 160 660 136 HOH HOH . D 4 HOH A 161 661 440 HOH HOH . D 4 HOH A 162 662 112 HOH HOH . D 4 HOH A 163 663 113 HOH HOH . D 4 HOH A 164 664 223 HOH HOH . D 4 HOH A 165 665 73 HOH HOH . D 4 HOH A 166 666 115 HOH HOH . D 4 HOH A 167 667 202 HOH HOH . D 4 HOH A 168 668 180 HOH HOH . D 4 HOH A 169 669 36 HOH HOH . D 4 HOH A 170 670 94 HOH HOH . D 4 HOH A 171 671 190 HOH HOH . D 4 HOH A 172 672 170 HOH HOH . D 4 HOH A 173 673 289 HOH HOH . D 4 HOH A 174 674 184 HOH HOH . D 4 HOH A 175 675 198 HOH HOH . D 4 HOH A 176 676 219 HOH HOH . D 4 HOH A 177 677 153 HOH HOH . D 4 HOH A 178 678 104 HOH HOH . D 4 HOH A 179 679 216 HOH HOH . D 4 HOH A 180 680 421 HOH HOH . D 4 HOH A 181 681 449 HOH HOH . D 4 HOH A 182 682 178 HOH HOH . D 4 HOH A 183 683 135 HOH HOH . D 4 HOH A 184 684 42 HOH HOH . D 4 HOH A 185 685 106 HOH HOH . D 4 HOH A 186 686 310 HOH HOH . D 4 HOH A 187 687 192 HOH HOH . D 4 HOH A 188 688 8 HOH HOH . D 4 HOH A 189 689 205 HOH HOH . D 4 HOH A 190 690 203 HOH HOH . D 4 HOH A 191 691 89 HOH HOH . D 4 HOH A 192 692 99 HOH HOH . D 4 HOH A 193 693 22 HOH HOH . D 4 HOH A 194 694 448 HOH HOH . D 4 HOH A 195 695 154 HOH HOH . D 4 HOH A 196 696 173 HOH HOH . D 4 HOH A 197 697 155 HOH HOH . D 4 HOH A 198 698 236 HOH HOH . D 4 HOH A 199 699 56 HOH HOH . D 4 HOH A 200 700 199 HOH HOH . D 4 HOH A 201 701 86 HOH HOH . D 4 HOH A 202 702 55 HOH HOH . D 4 HOH A 203 703 218 HOH HOH . D 4 HOH A 204 704 71 HOH HOH . D 4 HOH A 205 705 424 HOH HOH . D 4 HOH A 206 706 187 HOH HOH . D 4 HOH A 207 707 181 HOH HOH . D 4 HOH A 208 708 156 HOH HOH . D 4 HOH A 209 709 119 HOH HOH . D 4 HOH A 210 710 434 HOH HOH . D 4 HOH A 211 711 286 HOH HOH . D 4 HOH A 212 712 213 HOH HOH . D 4 HOH A 213 713 82 HOH HOH . D 4 HOH A 214 714 183 HOH HOH . D 4 HOH A 215 715 161 HOH HOH . D 4 HOH A 216 716 194 HOH HOH . D 4 HOH A 217 717 454 HOH HOH . D 4 HOH A 218 718 91 HOH HOH . D 4 HOH A 219 719 90 HOH HOH . D 4 HOH A 220 720 204 HOH HOH . D 4 HOH A 221 721 229 HOH HOH . D 4 HOH A 222 722 442 HOH HOH . D 4 HOH A 223 723 267 HOH HOH . D 4 HOH A 224 724 230 HOH HOH . D 4 HOH A 225 725 19 HOH HOH . D 4 HOH A 226 726 182 HOH HOH . D 4 HOH A 227 727 152 HOH HOH . D 4 HOH A 228 728 137 HOH HOH . D 4 HOH A 229 729 254 HOH HOH . D 4 HOH A 230 730 234 HOH HOH . D 4 HOH A 231 731 438 HOH HOH . D 4 HOH A 232 732 188 HOH HOH . D 4 HOH A 233 733 179 HOH HOH . D 4 HOH A 234 734 191 HOH HOH . D 4 HOH A 235 735 68 HOH HOH . D 4 HOH A 236 736 81 HOH HOH . D 4 HOH A 237 737 35 HOH HOH . D 4 HOH A 238 738 102 HOH HOH . D 4 HOH A 239 739 166 HOH HOH . D 4 HOH A 240 740 167 HOH HOH . D 4 HOH A 241 741 189 HOH HOH . D 4 HOH A 242 742 158 HOH HOH . D 4 HOH A 243 743 439 HOH HOH . D 4 HOH A 244 744 11 HOH HOH . D 4 HOH A 245 745 211 HOH HOH . D 4 HOH A 246 746 318 HOH HOH . D 4 HOH A 247 747 453 HOH HOH . D 4 HOH A 248 748 441 HOH HOH . D 4 HOH A 249 749 132 HOH HOH . D 4 HOH A 250 750 209 HOH HOH . D 4 HOH A 251 751 455 HOH HOH . D 4 HOH A 252 752 172 HOH HOH . D 4 HOH A 253 753 165 HOH HOH . D 4 HOH A 254 754 452 HOH HOH . D 4 HOH A 255 755 431 HOH HOH . D 4 HOH A 256 756 297 HOH HOH . D 4 HOH A 257 757 329 HOH HOH . D 4 HOH A 258 758 128 HOH HOH . D 4 HOH A 259 759 185 HOH HOH . D 4 HOH A 260 760 96 HOH HOH . D 4 HOH A 261 761 59 HOH HOH . D 4 HOH A 262 762 193 HOH HOH . D 4 HOH A 263 763 447 HOH HOH . D 4 HOH A 264 764 51 HOH HOH . D 4 HOH A 265 765 171 HOH HOH . D 4 HOH A 266 766 9 HOH HOH . D 4 HOH A 267 767 143 HOH HOH . D 4 HOH A 268 768 436 HOH HOH . D 4 HOH A 269 769 420 HOH HOH . D 4 HOH A 270 770 118 HOH HOH . D 4 HOH A 271 771 87 HOH HOH . D 4 HOH A 272 772 428 HOH HOH . D 4 HOH A 273 773 139 HOH HOH . D 4 HOH A 274 774 292 HOH HOH . D 4 HOH A 275 775 133 HOH HOH . D 4 HOH A 276 776 101 HOH HOH . D 4 HOH A 277 777 126 HOH HOH . D 4 HOH A 278 778 33 HOH HOH . D 4 HOH A 279 779 344 HOH HOH . D 4 HOH A 280 780 426 HOH HOH . D 4 HOH A 281 781 293 HOH HOH . D 4 HOH A 282 782 217 HOH HOH . D 4 HOH A 283 783 290 HOH HOH . D 4 HOH A 284 784 127 HOH HOH . D 4 HOH A 285 785 427 HOH HOH . D 4 HOH A 286 786 423 HOH HOH . D 4 HOH A 287 787 419 HOH HOH . D 4 HOH A 288 788 425 HOH HOH . D 4 HOH A 289 789 60 HOH HOH . D 4 HOH A 290 790 418 HOH HOH . D 4 HOH A 291 791 48 HOH HOH . D 4 HOH A 292 792 422 HOH HOH . D 4 HOH A 293 793 144 HOH HOH . D 4 HOH A 294 794 288 HOH HOH . D 4 HOH A 295 795 140 HOH HOH . D 4 HOH A 296 796 291 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 17.523 _atom_site.Cartn_y -10.241 _atom_site.Cartn_z 24.474 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #