data_5BVA # _model_server_result.job_id U_o0HpR3Q8CUvbrqvvq1tA _model_server_result.datetime_utc '2024-11-05 00:33:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5bva # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5BVA # _exptl.entry_id 5BVA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5BVA _cell.length_a 82.975 _cell.length_b 90.481 _cell.length_c 57.919 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BVA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5BVA _atom_sites.fract_transf_matrix[1][1] 0.012052 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 501 500 FAD FAD . C 3 EDO A 1 502 600 EDO EDO . D 4 HOH A 1 601 242 HOH HOH . D 4 HOH A 2 602 24 HOH HOH . D 4 HOH A 3 603 12 HOH HOH . D 4 HOH A 4 604 138 HOH HOH . D 4 HOH A 5 605 144 HOH HOH . D 4 HOH A 6 606 81 HOH HOH . D 4 HOH A 7 607 105 HOH HOH . D 4 HOH A 8 608 220 HOH HOH . D 4 HOH A 9 609 141 HOH HOH . D 4 HOH A 10 610 51 HOH HOH . D 4 HOH A 11 611 82 HOH HOH . D 4 HOH A 12 612 111 HOH HOH . D 4 HOH A 13 613 115 HOH HOH . D 4 HOH A 14 614 101 HOH HOH . D 4 HOH A 15 615 155 HOH HOH . D 4 HOH A 16 616 199 HOH HOH . D 4 HOH A 17 617 60 HOH HOH . D 4 HOH A 18 618 191 HOH HOH . D 4 HOH A 19 619 16 HOH HOH . D 4 HOH A 20 620 260 HOH HOH . D 4 HOH A 21 621 43 HOH HOH . D 4 HOH A 22 622 135 HOH HOH . D 4 HOH A 23 623 189 HOH HOH . D 4 HOH A 24 624 49 HOH HOH . D 4 HOH A 25 625 90 HOH HOH . D 4 HOH A 26 626 28 HOH HOH . D 4 HOH A 27 627 171 HOH HOH . D 4 HOH A 28 628 215 HOH HOH . D 4 HOH A 29 629 17 HOH HOH . D 4 HOH A 30 630 233 HOH HOH . D 4 HOH A 31 631 66 HOH HOH . D 4 HOH A 32 632 119 HOH HOH . D 4 HOH A 33 633 7 HOH HOH . D 4 HOH A 34 634 193 HOH HOH . D 4 HOH A 35 635 133 HOH HOH . D 4 HOH A 36 636 151 HOH HOH . D 4 HOH A 37 637 145 HOH HOH . D 4 HOH A 38 638 80 HOH HOH . D 4 HOH A 39 639 209 HOH HOH . D 4 HOH A 40 640 208 HOH HOH . D 4 HOH A 41 641 157 HOH HOH . D 4 HOH A 42 642 71 HOH HOH . D 4 HOH A 43 643 23 HOH HOH . D 4 HOH A 44 644 129 HOH HOH . D 4 HOH A 45 645 34 HOH HOH . D 4 HOH A 46 646 170 HOH HOH . D 4 HOH A 47 647 224 HOH HOH . D 4 HOH A 48 648 88 HOH HOH . D 4 HOH A 49 649 54 HOH HOH . D 4 HOH A 50 650 35 HOH HOH . D 4 HOH A 51 651 55 HOH HOH . D 4 HOH A 52 652 25 HOH HOH . D 4 HOH A 53 653 165 HOH HOH . D 4 HOH A 54 654 183 HOH HOH . D 4 HOH A 55 655 31 HOH HOH . D 4 HOH A 56 656 113 HOH HOH . D 4 HOH A 57 657 231 HOH HOH . D 4 HOH A 58 658 180 HOH HOH . D 4 HOH A 59 659 123 HOH HOH . D 4 HOH A 60 660 22 HOH HOH . D 4 HOH A 61 661 78 HOH HOH . D 4 HOH A 62 662 187 HOH HOH . D 4 HOH A 63 663 1 HOH HOH . D 4 HOH A 64 664 156 HOH HOH . D 4 HOH A 65 665 39 HOH HOH . D 4 HOH A 66 666 240 HOH HOH . D 4 HOH A 67 667 244 HOH HOH . D 4 HOH A 68 668 122 HOH HOH . D 4 HOH A 69 669 15 HOH HOH . D 4 HOH A 70 670 182 HOH HOH . D 4 HOH A 71 671 146 HOH HOH . D 4 HOH A 72 672 62 HOH HOH . D 4 HOH A 73 673 5 HOH HOH . D 4 HOH A 74 674 19 HOH HOH . D 4 HOH A 75 675 219 HOH HOH . D 4 HOH A 76 676 207 HOH HOH . D 4 HOH A 77 677 3 HOH HOH . D 4 HOH A 78 678 77 HOH HOH . D 4 HOH A 79 679 56 HOH HOH . D 4 HOH A 80 680 99 HOH HOH . D 4 HOH A 81 681 239 HOH HOH . D 4 HOH A 82 682 154 HOH HOH . D 4 HOH A 83 683 185 HOH HOH . D 4 HOH A 84 684 249 HOH HOH . D 4 HOH A 85 685 21 HOH HOH . D 4 HOH A 86 686 87 HOH HOH . D 4 HOH A 87 687 137 HOH HOH . D 4 HOH A 88 688 68 HOH HOH . D 4 HOH A 89 689 64 HOH HOH . D 4 HOH A 90 690 11 HOH HOH . D 4 HOH A 91 691 188 HOH HOH . D 4 HOH A 92 692 42 HOH HOH . D 4 HOH A 93 693 94 HOH HOH . D 4 HOH A 94 694 2 HOH HOH . D 4 HOH A 95 695 121 HOH HOH . D 4 HOH A 96 696 18 HOH HOH . D 4 HOH A 97 697 225 HOH HOH . D 4 HOH A 98 698 198 HOH HOH . D 4 HOH A 99 699 238 HOH HOH . D 4 HOH A 100 700 69 HOH HOH . D 4 HOH A 101 701 173 HOH HOH . D 4 HOH A 102 702 50 HOH HOH . D 4 HOH A 103 703 130 HOH HOH . D 4 HOH A 104 704 38 HOH HOH . D 4 HOH A 105 705 93 HOH HOH . D 4 HOH A 106 706 91 HOH HOH . D 4 HOH A 107 707 79 HOH HOH . D 4 HOH A 108 708 59 HOH HOH . D 4 HOH A 109 709 110 HOH HOH . D 4 HOH A 110 710 36 HOH HOH . D 4 HOH A 111 711 166 HOH HOH . D 4 HOH A 112 712 40 HOH HOH . D 4 HOH A 113 713 128 HOH HOH . D 4 HOH A 114 714 4 HOH HOH . D 4 HOH A 115 715 61 HOH HOH . D 4 HOH A 116 716 14 HOH HOH . D 4 HOH A 117 717 48 HOH HOH . D 4 HOH A 118 718 192 HOH HOH . D 4 HOH A 119 719 142 HOH HOH . D 4 HOH A 120 720 104 HOH HOH . D 4 HOH A 121 721 246 HOH HOH . D 4 HOH A 122 722 226 HOH HOH . D 4 HOH A 123 723 47 HOH HOH . D 4 HOH A 124 724 143 HOH HOH . D 4 HOH A 125 725 41 HOH HOH . D 4 HOH A 126 726 126 HOH HOH . D 4 HOH A 127 727 161 HOH HOH . D 4 HOH A 128 728 162 HOH HOH . D 4 HOH A 129 729 98 HOH HOH . D 4 HOH A 130 730 75 HOH HOH . D 4 HOH A 131 731 202 HOH HOH . D 4 HOH A 132 732 116 HOH HOH . D 4 HOH A 133 733 132 HOH HOH . D 4 HOH A 134 734 136 HOH HOH . D 4 HOH A 135 735 159 HOH HOH . D 4 HOH A 136 736 124 HOH HOH . D 4 HOH A 137 737 76 HOH HOH . D 4 HOH A 138 738 163 HOH HOH . D 4 HOH A 139 739 13 HOH HOH . D 4 HOH A 140 740 20 HOH HOH . D 4 HOH A 141 741 179 HOH HOH . D 4 HOH A 142 742 8 HOH HOH . D 4 HOH A 143 743 131 HOH HOH . D 4 HOH A 144 744 102 HOH HOH . D 4 HOH A 145 745 263 HOH HOH . D 4 HOH A 146 746 92 HOH HOH . D 4 HOH A 147 747 237 HOH HOH . D 4 HOH A 148 748 95 HOH HOH . D 4 HOH A 149 749 30 HOH HOH . D 4 HOH A 150 750 44 HOH HOH . D 4 HOH A 151 751 67 HOH HOH . D 4 HOH A 152 752 227 HOH HOH . D 4 HOH A 153 753 6 HOH HOH . D 4 HOH A 154 754 26 HOH HOH . D 4 HOH A 155 755 29 HOH HOH . D 4 HOH A 156 756 194 HOH HOH . D 4 HOH A 157 757 201 HOH HOH . D 4 HOH A 158 758 65 HOH HOH . D 4 HOH A 159 759 212 HOH HOH . D 4 HOH A 160 760 114 HOH HOH . D 4 HOH A 161 761 58 HOH HOH . D 4 HOH A 162 762 134 HOH HOH . D 4 HOH A 163 763 83 HOH HOH . D 4 HOH A 164 764 86 HOH HOH . D 4 HOH A 165 765 125 HOH HOH . D 4 HOH A 166 766 33 HOH HOH . D 4 HOH A 167 767 216 HOH HOH . D 4 HOH A 168 768 9 HOH HOH . D 4 HOH A 169 769 250 HOH HOH . D 4 HOH A 170 770 37 HOH HOH . D 4 HOH A 171 771 175 HOH HOH . D 4 HOH A 172 772 275 HOH HOH . D 4 HOH A 173 773 167 HOH HOH . D 4 HOH A 174 774 117 HOH HOH . D 4 HOH A 175 775 160 HOH HOH . D 4 HOH A 176 776 96 HOH HOH . D 4 HOH A 177 777 168 HOH HOH . D 4 HOH A 178 778 265 HOH HOH . D 4 HOH A 179 779 106 HOH HOH . D 4 HOH A 180 780 127 HOH HOH . D 4 HOH A 181 781 261 HOH HOH . D 4 HOH A 182 782 190 HOH HOH . D 4 HOH A 183 783 46 HOH HOH . D 4 HOH A 184 784 140 HOH HOH . D 4 HOH A 185 785 177 HOH HOH . D 4 HOH A 186 786 85 HOH HOH . D 4 HOH A 187 787 10 HOH HOH . D 4 HOH A 188 788 118 HOH HOH . D 4 HOH A 189 789 174 HOH HOH . D 4 HOH A 190 790 271 HOH HOH . D 4 HOH A 191 791 245 HOH HOH . D 4 HOH A 192 792 254 HOH HOH . D 4 HOH A 193 793 268 HOH HOH . D 4 HOH A 194 794 53 HOH HOH . D 4 HOH A 195 795 63 HOH HOH . D 4 HOH A 196 796 221 HOH HOH . D 4 HOH A 197 797 252 HOH HOH . D 4 HOH A 198 798 153 HOH HOH . D 4 HOH A 199 799 52 HOH HOH . D 4 HOH A 200 800 73 HOH HOH . D 4 HOH A 201 801 176 HOH HOH . D 4 HOH A 202 802 267 HOH HOH . D 4 HOH A 203 803 84 HOH HOH . D 4 HOH A 204 804 27 HOH HOH . D 4 HOH A 205 805 222 HOH HOH . D 4 HOH A 206 806 186 HOH HOH . D 4 HOH A 207 807 147 HOH HOH . D 4 HOH A 208 808 149 HOH HOH . D 4 HOH A 209 809 241 HOH HOH . D 4 HOH A 210 810 259 HOH HOH . D 4 HOH A 211 811 32 HOH HOH . D 4 HOH A 212 812 272 HOH HOH . D 4 HOH A 213 813 181 HOH HOH . D 4 HOH A 214 814 72 HOH HOH . D 4 HOH A 215 815 200 HOH HOH . D 4 HOH A 216 816 247 HOH HOH . D 4 HOH A 217 817 169 HOH HOH . D 4 HOH A 218 818 89 HOH HOH . D 4 HOH A 219 819 197 HOH HOH . D 4 HOH A 220 820 258 HOH HOH . D 4 HOH A 221 821 120 HOH HOH . D 4 HOH A 222 822 210 HOH HOH . D 4 HOH A 223 823 253 HOH HOH . D 4 HOH A 224 824 251 HOH HOH . D 4 HOH A 225 825 229 HOH HOH . D 4 HOH A 226 826 158 HOH HOH . D 4 HOH A 227 827 164 HOH HOH . D 4 HOH A 228 828 150 HOH HOH . D 4 HOH A 229 829 274 HOH HOH . D 4 HOH A 230 830 109 HOH HOH . D 4 HOH A 231 831 214 HOH HOH . D 4 HOH A 232 832 57 HOH HOH . D 4 HOH A 233 833 195 HOH HOH . D 4 HOH A 234 834 107 HOH HOH . D 4 HOH A 235 835 100 HOH HOH . D 4 HOH A 236 836 248 HOH HOH . D 4 HOH A 237 837 266 HOH HOH . D 4 HOH A 238 838 108 HOH HOH . D 4 HOH A 239 839 218 HOH HOH . D 4 HOH A 240 840 228 HOH HOH . D 4 HOH A 241 841 230 HOH HOH . D 4 HOH A 242 842 184 HOH HOH . D 4 HOH A 243 843 203 HOH HOH . D 4 HOH A 244 844 148 HOH HOH . D 4 HOH A 245 845 235 HOH HOH . D 4 HOH A 246 846 45 HOH HOH . D 4 HOH A 247 847 172 HOH HOH . D 4 HOH A 248 848 204 HOH HOH . D 4 HOH A 249 849 264 HOH HOH . D 4 HOH A 250 850 270 HOH HOH . D 4 HOH A 251 851 213 HOH HOH . D 4 HOH A 252 852 196 HOH HOH . D 4 HOH A 253 853 269 HOH HOH . D 4 HOH A 254 854 97 HOH HOH . D 4 HOH A 255 855 74 HOH HOH . D 4 HOH A 256 856 217 HOH HOH . D 4 HOH A 257 857 152 HOH HOH . D 4 HOH A 258 858 243 HOH HOH . D 4 HOH A 259 859 206 HOH HOH . D 4 HOH A 260 860 205 HOH HOH . D 4 HOH A 261 861 262 HOH HOH . D 4 HOH A 262 862 103 HOH HOH . D 4 HOH A 263 863 112 HOH HOH . D 4 HOH A 264 864 257 HOH HOH . D 4 HOH A 265 865 70 HOH HOH . D 4 HOH A 266 866 232 HOH HOH . D 4 HOH A 267 867 234 HOH HOH . D 4 HOH A 268 868 256 HOH HOH . D 4 HOH A 269 869 255 HOH HOH . D 4 HOH A 270 870 273 HOH HOH . D 4 HOH A 271 871 178 HOH HOH . D 4 HOH A 272 872 236 HOH HOH . D 4 HOH A 273 873 211 HOH HOH . D 4 HOH A 274 874 223 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 65.942 14.85 59.115 1 23.78 ? C1 EDO 502 A 1 HETATM 2 O O1 EDO . . . C 3 64.642 14.45 58.702 1 25.04 ? O1 EDO 502 A 1 HETATM 3 C C2 EDO . . . C 3 66.643 15.648 58.024 1 26.71 ? C2 EDO 502 A 1 HETATM 4 O O2 EDO . . . C 3 67.641 16.464 58.65 1 32.88 ? O2 EDO 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #