data_5BVO # _model_server_result.job_id PXy69sJ2XizP1qibDDgGYg _model_server_result.datetime_utc '2024-12-18 03:23:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5bvo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1005}' # _entry.id 5BVO # _exptl.entry_id 5BVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5BVO _cell.length_a 61.921 _cell.length_b 78.36 _cell.length_c 75.732 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5BVO _atom_sites.fract_transf_matrix[1][1] 0.01615 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 1001 1 IOD IOD . C 2 IOD A 1 1002 2 IOD IOD . D 2 IOD A 1 1003 3 IOD IOD . E 2 IOD A 1 1004 4 IOD IOD . F 2 IOD A 1 1005 5 IOD IOD . G 2 IOD A 1 1006 6 IOD IOD . H 2 IOD A 1 1007 219 IOD IOD . I 3 4VE A 1 1008 1 4VE L01 . J 4 HOH A 1 1101 279 HOH HOH . J 4 HOH A 2 1102 265 HOH HOH . J 4 HOH A 3 1103 355 HOH HOH . J 4 HOH A 4 1104 283 HOH HOH . J 4 HOH A 5 1105 333 HOH HOH . J 4 HOH A 6 1106 231 HOH HOH . J 4 HOH A 7 1107 251 HOH HOH . J 4 HOH A 8 1108 354 HOH HOH . J 4 HOH A 9 1109 349 HOH HOH . J 4 HOH A 10 1110 240 HOH HOH . J 4 HOH A 11 1111 382 HOH HOH . J 4 HOH A 12 1112 369 HOH HOH . J 4 HOH A 13 1113 436 HOH HOH . J 4 HOH A 14 1114 297 HOH HOH . J 4 HOH A 15 1115 255 HOH HOH . J 4 HOH A 16 1116 367 HOH HOH . J 4 HOH A 17 1117 371 HOH HOH . J 4 HOH A 18 1118 383 HOH HOH . J 4 HOH A 19 1119 264 HOH HOH . J 4 HOH A 20 1120 254 HOH HOH . J 4 HOH A 21 1121 409 HOH HOH . J 4 HOH A 22 1122 365 HOH HOH . J 4 HOH A 23 1123 223 HOH HOH . J 4 HOH A 24 1124 432 HOH HOH . J 4 HOH A 25 1125 335 HOH HOH . J 4 HOH A 26 1126 230 HOH HOH . J 4 HOH A 27 1127 372 HOH HOH . J 4 HOH A 28 1128 368 HOH HOH . J 4 HOH A 29 1129 224 HOH HOH . J 4 HOH A 30 1130 286 HOH HOH . J 4 HOH A 31 1131 318 HOH HOH . J 4 HOH A 32 1132 294 HOH HOH . J 4 HOH A 33 1133 381 HOH HOH . J 4 HOH A 34 1134 222 HOH HOH . J 4 HOH A 35 1135 411 HOH HOH . J 4 HOH A 36 1136 244 HOH HOH . J 4 HOH A 37 1137 281 HOH HOH . J 4 HOH A 38 1138 263 HOH HOH . J 4 HOH A 39 1139 293 HOH HOH . J 4 HOH A 40 1140 439 HOH HOH . J 4 HOH A 41 1141 262 HOH HOH . J 4 HOH A 42 1142 266 HOH HOH . J 4 HOH A 43 1143 247 HOH HOH . J 4 HOH A 44 1144 278 HOH HOH . J 4 HOH A 45 1145 339 HOH HOH . J 4 HOH A 46 1146 418 HOH HOH . J 4 HOH A 47 1147 469 HOH HOH . J 4 HOH A 48 1148 315 HOH HOH . J 4 HOH A 49 1149 412 HOH HOH . J 4 HOH A 50 1150 336 HOH HOH . J 4 HOH A 51 1151 229 HOH HOH . J 4 HOH A 52 1152 357 HOH HOH . J 4 HOH A 53 1153 410 HOH HOH . J 4 HOH A 54 1154 324 HOH HOH . J 4 HOH A 55 1155 245 HOH HOH . J 4 HOH A 56 1156 234 HOH HOH . J 4 HOH A 57 1157 373 HOH HOH . J 4 HOH A 58 1158 287 HOH HOH . J 4 HOH A 59 1159 282 HOH HOH . J 4 HOH A 60 1160 360 HOH HOH . J 4 HOH A 61 1161 344 HOH HOH . J 4 HOH A 62 1162 463 HOH HOH . J 4 HOH A 63 1163 425 HOH HOH . J 4 HOH A 64 1164 295 HOH HOH . J 4 HOH A 65 1165 385 HOH HOH . J 4 HOH A 66 1166 291 HOH HOH . J 4 HOH A 67 1167 276 HOH HOH . J 4 HOH A 68 1168 408 HOH HOH . J 4 HOH A 69 1169 438 HOH HOH . J 4 HOH A 70 1170 376 HOH HOH . J 4 HOH A 71 1171 374 HOH HOH . J 4 HOH A 72 1172 271 HOH HOH . J 4 HOH A 73 1173 285 HOH HOH . J 4 HOH A 74 1174 461 HOH HOH . J 4 HOH A 75 1175 280 HOH HOH . J 4 HOH A 76 1176 301 HOH HOH . J 4 HOH A 77 1177 459 HOH HOH . J 4 HOH A 78 1178 290 HOH HOH . J 4 HOH A 79 1179 404 HOH HOH . J 4 HOH A 80 1180 257 HOH HOH . J 4 HOH A 81 1181 309 HOH HOH . J 4 HOH A 82 1182 226 HOH HOH . J 4 HOH A 83 1183 362 HOH HOH . J 4 HOH A 84 1184 407 HOH HOH . J 4 HOH A 85 1185 288 HOH HOH . J 4 HOH A 86 1186 320 HOH HOH . J 4 HOH A 87 1187 345 HOH HOH . J 4 HOH A 88 1188 268 HOH HOH . J 4 HOH A 89 1189 428 HOH HOH . J 4 HOH A 90 1190 380 HOH HOH . J 4 HOH A 91 1191 343 HOH HOH . J 4 HOH A 92 1192 299 HOH HOH . J 4 HOH A 93 1193 228 HOH HOH . J 4 HOH A 94 1194 237 HOH HOH . J 4 HOH A 95 1195 258 HOH HOH . J 4 HOH A 96 1196 273 HOH HOH . J 4 HOH A 97 1197 225 HOH HOH . J 4 HOH A 98 1198 346 HOH HOH . J 4 HOH A 99 1199 451 HOH HOH . J 4 HOH A 100 1200 334 HOH HOH . J 4 HOH A 101 1201 311 HOH HOH . J 4 HOH A 102 1202 379 HOH HOH . J 4 HOH A 103 1203 306 HOH HOH . J 4 HOH A 104 1204 236 HOH HOH . J 4 HOH A 105 1205 249 HOH HOH . J 4 HOH A 106 1206 302 HOH HOH . J 4 HOH A 107 1207 248 HOH HOH . J 4 HOH A 108 1208 453 HOH HOH . J 4 HOH A 109 1209 350 HOH HOH . J 4 HOH A 110 1210 471 HOH HOH . J 4 HOH A 111 1211 441 HOH HOH . J 4 HOH A 112 1212 448 HOH HOH . J 4 HOH A 113 1213 243 HOH HOH . J 4 HOH A 114 1214 242 HOH HOH . J 4 HOH A 115 1215 270 HOH HOH . J 4 HOH A 116 1216 233 HOH HOH . J 4 HOH A 117 1217 238 HOH HOH . J 4 HOH A 118 1218 481 HOH HOH . J 4 HOH A 119 1219 272 HOH HOH . J 4 HOH A 120 1220 340 HOH HOH . J 4 HOH A 121 1221 267 HOH HOH . J 4 HOH A 122 1222 227 HOH HOH . J 4 HOH A 123 1223 312 HOH HOH . J 4 HOH A 124 1224 304 HOH HOH . J 4 HOH A 125 1225 330 HOH HOH . J 4 HOH A 126 1226 300 HOH HOH . J 4 HOH A 127 1227 313 HOH HOH . J 4 HOH A 128 1228 359 HOH HOH . J 4 HOH A 129 1229 464 HOH HOH . J 4 HOH A 130 1230 325 HOH HOH . J 4 HOH A 131 1231 260 HOH HOH . J 4 HOH A 132 1232 397 HOH HOH . J 4 HOH A 133 1233 246 HOH HOH . J 4 HOH A 134 1234 275 HOH HOH . J 4 HOH A 135 1235 322 HOH HOH . J 4 HOH A 136 1236 296 HOH HOH . J 4 HOH A 137 1237 310 HOH HOH . J 4 HOH A 138 1238 377 HOH HOH . J 4 HOH A 139 1239 389 HOH HOH . J 4 HOH A 140 1240 305 HOH HOH . J 4 HOH A 141 1241 406 HOH HOH . J 4 HOH A 142 1242 235 HOH HOH . J 4 HOH A 143 1243 395 HOH HOH . J 4 HOH A 144 1244 363 HOH HOH . J 4 HOH A 145 1245 332 HOH HOH . J 4 HOH A 146 1246 388 HOH HOH . J 4 HOH A 147 1247 269 HOH HOH . J 4 HOH A 148 1248 317 HOH HOH . J 4 HOH A 149 1249 413 HOH HOH . J 4 HOH A 150 1250 314 HOH HOH . J 4 HOH A 151 1251 426 HOH HOH . J 4 HOH A 152 1252 444 HOH HOH . J 4 HOH A 153 1253 259 HOH HOH . J 4 HOH A 154 1254 370 HOH HOH . J 4 HOH A 155 1255 250 HOH HOH . J 4 HOH A 156 1256 456 HOH HOH . J 4 HOH A 157 1257 232 HOH HOH . J 4 HOH A 158 1258 446 HOH HOH . J 4 HOH A 159 1259 422 HOH HOH . J 4 HOH A 160 1260 361 HOH HOH . J 4 HOH A 161 1261 417 HOH HOH . J 4 HOH A 162 1262 458 HOH HOH . J 4 HOH A 163 1263 457 HOH HOH . J 4 HOH A 164 1264 401 HOH HOH . J 4 HOH A 165 1265 414 HOH HOH . J 4 HOH A 166 1266 393 HOH HOH . J 4 HOH A 167 1267 241 HOH HOH . J 4 HOH A 168 1268 351 HOH HOH . J 4 HOH A 169 1269 384 HOH HOH . J 4 HOH A 170 1270 337 HOH HOH . J 4 HOH A 171 1271 477 HOH HOH . J 4 HOH A 172 1272 435 HOH HOH . J 4 HOH A 173 1273 321 HOH HOH . J 4 HOH A 174 1274 479 HOH HOH . J 4 HOH A 175 1275 220 HOH HOH . J 4 HOH A 176 1276 289 HOH HOH . J 4 HOH A 177 1277 465 HOH HOH . J 4 HOH A 178 1278 327 HOH HOH . J 4 HOH A 179 1279 470 HOH HOH . J 4 HOH A 180 1280 239 HOH HOH . J 4 HOH A 181 1281 454 HOH HOH . J 4 HOH A 182 1282 387 HOH HOH . J 4 HOH A 183 1283 303 HOH HOH . J 4 HOH A 184 1284 252 HOH HOH . J 4 HOH A 185 1285 284 HOH HOH . J 4 HOH A 186 1286 323 HOH HOH . J 4 HOH A 187 1287 221 HOH HOH . J 4 HOH A 188 1288 341 HOH HOH . J 4 HOH A 189 1289 405 HOH HOH . J 4 HOH A 190 1290 307 HOH HOH . J 4 HOH A 191 1291 326 HOH HOH . J 4 HOH A 192 1292 430 HOH HOH . J 4 HOH A 193 1293 331 HOH HOH . J 4 HOH A 194 1294 416 HOH HOH . J 4 HOH A 195 1295 467 HOH HOH . J 4 HOH A 196 1296 338 HOH HOH . J 4 HOH A 197 1297 386 HOH HOH . J 4 HOH A 198 1298 480 HOH HOH . J 4 HOH A 199 1299 261 HOH HOH . J 4 HOH A 200 1300 292 HOH HOH . J 4 HOH A 201 1301 475 HOH HOH . J 4 HOH A 202 1302 415 HOH HOH . J 4 HOH A 203 1303 423 HOH HOH . J 4 HOH A 204 1304 449 HOH HOH . J 4 HOH A 205 1305 348 HOH HOH . J 4 HOH A 206 1306 427 HOH HOH . J 4 HOH A 207 1307 391 HOH HOH . J 4 HOH A 208 1308 274 HOH HOH . J 4 HOH A 209 1309 466 HOH HOH . J 4 HOH A 210 1310 442 HOH HOH . J 4 HOH A 211 1311 394 HOH HOH . J 4 HOH A 212 1312 298 HOH HOH . J 4 HOH A 213 1313 455 HOH HOH . J 4 HOH A 214 1314 308 HOH HOH . J 4 HOH A 215 1315 316 HOH HOH . J 4 HOH A 216 1316 424 HOH HOH . J 4 HOH A 217 1317 319 HOH HOH . J 4 HOH A 218 1318 356 HOH HOH . J 4 HOH A 219 1319 419 HOH HOH . J 4 HOH A 220 1320 429 HOH HOH . J 4 HOH A 221 1321 420 HOH HOH . J 4 HOH A 222 1322 443 HOH HOH . J 4 HOH A 223 1323 392 HOH HOH . J 4 HOH A 224 1324 390 HOH HOH . J 4 HOH A 225 1325 277 HOH HOH . J 4 HOH A 226 1326 433 HOH HOH . J 4 HOH A 227 1327 399 HOH HOH . J 4 HOH A 228 1328 352 HOH HOH . J 4 HOH A 229 1329 347 HOH HOH . J 4 HOH A 230 1330 474 HOH HOH . J 4 HOH A 231 1331 375 HOH HOH . J 4 HOH A 232 1332 434 HOH HOH . J 4 HOH A 233 1333 402 HOH HOH . J 4 HOH A 234 1334 478 HOH HOH . J 4 HOH A 235 1335 364 HOH HOH . J 4 HOH A 236 1336 329 HOH HOH . J 4 HOH A 237 1337 396 HOH HOH . J 4 HOH A 238 1338 328 HOH HOH . J 4 HOH A 239 1339 460 HOH HOH . J 4 HOH A 240 1340 256 HOH HOH . J 4 HOH A 241 1341 445 HOH HOH . J 4 HOH A 242 1342 437 HOH HOH . J 4 HOH A 243 1343 353 HOH HOH . J 4 HOH A 244 1344 447 HOH HOH . J 4 HOH A 245 1345 450 HOH HOH . J 4 HOH A 246 1346 366 HOH HOH . J 4 HOH A 247 1347 398 HOH HOH . J 4 HOH A 248 1348 452 HOH HOH . J 4 HOH A 249 1349 462 HOH HOH . J 4 HOH A 250 1350 378 HOH HOH . J 4 HOH A 251 1351 473 HOH HOH . J 4 HOH A 252 1352 253 HOH HOH . J 4 HOH A 253 1353 342 HOH HOH . J 4 HOH A 254 1354 476 HOH HOH . J 4 HOH A 255 1355 468 HOH HOH . J 4 HOH A 256 1356 400 HOH HOH . J 4 HOH A 257 1357 421 HOH HOH . J 4 HOH A 258 1358 403 HOH HOH . J 4 HOH A 259 1359 358 HOH HOH . J 4 HOH A 260 1360 440 HOH HOH . J 4 HOH A 261 1361 431 HOH HOH . J 4 HOH A 262 1362 472 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.572 _atom_site.Cartn_y 32.668 _atom_site.Cartn_z 17.793 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 105.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1005 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #