data_5BVW # _model_server_result.job_id Wck1gIOcq6wZuAFw5RFYTQ _model_server_result.datetime_utc '2024-11-22 18:27:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5bvw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1007}' # _entry.id 5BVW # _exptl.entry_id 5BVW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5BVW _cell.length_a 61.642 _cell.length_b 72.78 _cell.length_c 75.787 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BVW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 691 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 109 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 698 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.053 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5BVW _atom_sites.fract_transf_matrix[1][1] 0.016223 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01374 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 1001 1 IOD IOD . C 2 IOD A 1 1002 2 IOD IOD . D 2 IOD A 1 1003 3 IOD IOD . E 2 IOD A 1 1004 4 IOD IOD . F 2 IOD A 1 1005 5 IOD IOD . G 2 IOD A 1 1006 6 IOD IOD . H 2 IOD A 1 1007 291 IOD IOD . I 2 IOD A 1 1008 292 IOD IOD . J 3 1N1 A 1 1009 1 1N1 L01 . K 4 HOH A 1 1101 297 HOH HOH . K 4 HOH A 2 1102 73 HOH HOH . K 4 HOH A 3 1103 252 HOH HOH . K 4 HOH A 4 1104 2 HOH HOH . K 4 HOH A 5 1105 111 HOH HOH . K 4 HOH A 6 1106 39 HOH HOH . K 4 HOH A 7 1107 15 HOH HOH . K 4 HOH A 8 1108 217 HOH HOH . K 4 HOH A 9 1109 239 HOH HOH . K 4 HOH A 10 1110 266 HOH HOH . K 4 HOH A 11 1111 94 HOH HOH . K 4 HOH A 12 1112 213 HOH HOH . K 4 HOH A 13 1113 105 HOH HOH . K 4 HOH A 14 1114 183 HOH HOH . K 4 HOH A 15 1115 79 HOH HOH . K 4 HOH A 16 1116 135 HOH HOH . K 4 HOH A 17 1117 260 HOH HOH . K 4 HOH A 18 1118 9 HOH HOH . K 4 HOH A 19 1119 67 HOH HOH . K 4 HOH A 20 1120 122 HOH HOH . K 4 HOH A 21 1121 32 HOH HOH . K 4 HOH A 22 1122 81 HOH HOH . K 4 HOH A 23 1123 17 HOH HOH . K 4 HOH A 24 1124 5 HOH HOH . K 4 HOH A 25 1125 90 HOH HOH . K 4 HOH A 26 1126 36 HOH HOH . K 4 HOH A 27 1127 43 HOH HOH . K 4 HOH A 28 1128 63 HOH HOH . K 4 HOH A 29 1129 156 HOH HOH . K 4 HOH A 30 1130 119 HOH HOH . K 4 HOH A 31 1131 251 HOH HOH . K 4 HOH A 32 1132 89 HOH HOH . K 4 HOH A 33 1133 72 HOH HOH . K 4 HOH A 34 1134 8 HOH HOH . K 4 HOH A 35 1135 3 HOH HOH . K 4 HOH A 36 1136 174 HOH HOH . K 4 HOH A 37 1137 164 HOH HOH . K 4 HOH A 38 1138 69 HOH HOH . K 4 HOH A 39 1139 7 HOH HOH . K 4 HOH A 40 1140 64 HOH HOH . K 4 HOH A 41 1141 107 HOH HOH . K 4 HOH A 42 1142 270 HOH HOH . K 4 HOH A 43 1143 132 HOH HOH . K 4 HOH A 44 1144 114 HOH HOH . K 4 HOH A 45 1145 275 HOH HOH . K 4 HOH A 46 1146 177 HOH HOH . K 4 HOH A 47 1147 80 HOH HOH . K 4 HOH A 48 1148 75 HOH HOH . K 4 HOH A 49 1149 243 HOH HOH . K 4 HOH A 50 1150 113 HOH HOH . K 4 HOH A 51 1151 116 HOH HOH . K 4 HOH A 52 1152 159 HOH HOH . K 4 HOH A 53 1153 14 HOH HOH . K 4 HOH A 54 1154 86 HOH HOH . K 4 HOH A 55 1155 22 HOH HOH . K 4 HOH A 56 1156 60 HOH HOH . K 4 HOH A 57 1157 41 HOH HOH . K 4 HOH A 58 1158 26 HOH HOH . K 4 HOH A 59 1159 142 HOH HOH . K 4 HOH A 60 1160 171 HOH HOH . K 4 HOH A 61 1161 207 HOH HOH . K 4 HOH A 62 1162 140 HOH HOH . K 4 HOH A 63 1163 298 HOH HOH . K 4 HOH A 64 1164 97 HOH HOH . K 4 HOH A 65 1165 241 HOH HOH . K 4 HOH A 66 1166 179 HOH HOH . K 4 HOH A 67 1167 153 HOH HOH . K 4 HOH A 68 1168 150 HOH HOH . K 4 HOH A 69 1169 88 HOH HOH . K 4 HOH A 70 1170 11 HOH HOH . K 4 HOH A 71 1171 95 HOH HOH . K 4 HOH A 72 1172 141 HOH HOH . K 4 HOH A 73 1173 82 HOH HOH . K 4 HOH A 74 1174 144 HOH HOH . K 4 HOH A 75 1175 54 HOH HOH . K 4 HOH A 76 1176 78 HOH HOH . K 4 HOH A 77 1177 227 HOH HOH . K 4 HOH A 78 1178 35 HOH HOH . K 4 HOH A 79 1179 284 HOH HOH . K 4 HOH A 80 1180 249 HOH HOH . K 4 HOH A 81 1181 139 HOH HOH . K 4 HOH A 82 1182 271 HOH HOH . K 4 HOH A 83 1183 293 HOH HOH . K 4 HOH A 84 1184 120 HOH HOH . K 4 HOH A 85 1185 265 HOH HOH . K 4 HOH A 86 1186 261 HOH HOH . K 4 HOH A 87 1187 59 HOH HOH . K 4 HOH A 88 1188 257 HOH HOH . K 4 HOH A 89 1189 85 HOH HOH . K 4 HOH A 90 1190 269 HOH HOH . K 4 HOH A 91 1191 27 HOH HOH . K 4 HOH A 92 1192 300 HOH HOH . K 4 HOH A 93 1193 49 HOH HOH . K 4 HOH A 94 1194 74 HOH HOH . K 4 HOH A 95 1195 262 HOH HOH . K 4 HOH A 96 1196 224 HOH HOH . K 4 HOH A 97 1197 280 HOH HOH . K 4 HOH A 98 1198 199 HOH HOH . K 4 HOH A 99 1199 133 HOH HOH . K 4 HOH A 100 1200 181 HOH HOH . K 4 HOH A 101 1201 53 HOH HOH . K 4 HOH A 102 1202 230 HOH HOH . K 4 HOH A 103 1203 40 HOH HOH . K 4 HOH A 104 1204 57 HOH HOH . K 4 HOH A 105 1205 65 HOH HOH . K 4 HOH A 106 1206 244 HOH HOH . K 4 HOH A 107 1207 101 HOH HOH . K 4 HOH A 108 1208 145 HOH HOH . K 4 HOH A 109 1209 10 HOH HOH . K 4 HOH A 110 1210 38 HOH HOH . K 4 HOH A 111 1211 115 HOH HOH . K 4 HOH A 112 1212 267 HOH HOH . K 4 HOH A 113 1213 175 HOH HOH . K 4 HOH A 114 1214 46 HOH HOH . K 4 HOH A 115 1215 31 HOH HOH . K 4 HOH A 116 1216 290 HOH HOH . K 4 HOH A 117 1217 137 HOH HOH . K 4 HOH A 118 1218 188 HOH HOH . K 4 HOH A 119 1219 226 HOH HOH . K 4 HOH A 120 1220 45 HOH HOH . K 4 HOH A 121 1221 245 HOH HOH . K 4 HOH A 122 1222 51 HOH HOH . K 4 HOH A 123 1223 276 HOH HOH . K 4 HOH A 124 1224 158 HOH HOH . K 4 HOH A 125 1225 172 HOH HOH . K 4 HOH A 126 1226 134 HOH HOH . K 4 HOH A 127 1227 289 HOH HOH . K 4 HOH A 128 1228 285 HOH HOH . K 4 HOH A 129 1229 48 HOH HOH . K 4 HOH A 130 1230 91 HOH HOH . K 4 HOH A 131 1231 220 HOH HOH . K 4 HOH A 132 1232 274 HOH HOH . K 4 HOH A 133 1233 58 HOH HOH . K 4 HOH A 134 1234 6 HOH HOH . K 4 HOH A 135 1235 42 HOH HOH . K 4 HOH A 136 1236 18 HOH HOH . K 4 HOH A 137 1237 96 HOH HOH . K 4 HOH A 138 1238 130 HOH HOH . K 4 HOH A 139 1239 34 HOH HOH . K 4 HOH A 140 1240 50 HOH HOH . K 4 HOH A 141 1241 147 HOH HOH . K 4 HOH A 142 1242 25 HOH HOH . K 4 HOH A 143 1243 56 HOH HOH . K 4 HOH A 144 1244 61 HOH HOH . K 4 HOH A 145 1245 286 HOH HOH . K 4 HOH A 146 1246 216 HOH HOH . K 4 HOH A 147 1247 93 HOH HOH . K 4 HOH A 148 1248 195 HOH HOH . K 4 HOH A 149 1249 202 HOH HOH . K 4 HOH A 150 1250 16 HOH HOH . K 4 HOH A 151 1251 152 HOH HOH . K 4 HOH A 152 1252 273 HOH HOH . K 4 HOH A 153 1253 19 HOH HOH . K 4 HOH A 154 1254 87 HOH HOH . K 4 HOH A 155 1255 242 HOH HOH . K 4 HOH A 156 1256 221 HOH HOH . K 4 HOH A 157 1257 68 HOH HOH . K 4 HOH A 158 1258 258 HOH HOH . K 4 HOH A 159 1259 112 HOH HOH . K 4 HOH A 160 1260 160 HOH HOH . K 4 HOH A 161 1261 106 HOH HOH . K 4 HOH A 162 1262 178 HOH HOH . K 4 HOH A 163 1263 184 HOH HOH . K 4 HOH A 164 1264 154 HOH HOH . K 4 HOH A 165 1265 28 HOH HOH . K 4 HOH A 166 1266 236 HOH HOH . K 4 HOH A 167 1267 136 HOH HOH . K 4 HOH A 168 1268 52 HOH HOH . K 4 HOH A 169 1269 288 HOH HOH . K 4 HOH A 170 1270 228 HOH HOH . K 4 HOH A 171 1271 295 HOH HOH . K 4 HOH A 172 1272 149 HOH HOH . K 4 HOH A 173 1273 294 HOH HOH . K 4 HOH A 174 1274 148 HOH HOH . K 4 HOH A 175 1275 232 HOH HOH . K 4 HOH A 176 1276 37 HOH HOH . K 4 HOH A 177 1277 238 HOH HOH . K 4 HOH A 178 1278 168 HOH HOH . K 4 HOH A 179 1279 200 HOH HOH . K 4 HOH A 180 1280 281 HOH HOH . K 4 HOH A 181 1281 218 HOH HOH . K 4 HOH A 182 1282 20 HOH HOH . K 4 HOH A 183 1283 279 HOH HOH . K 4 HOH A 184 1284 98 HOH HOH . K 4 HOH A 185 1285 124 HOH HOH . K 4 HOH A 186 1286 237 HOH HOH . K 4 HOH A 187 1287 225 HOH HOH . K 4 HOH A 188 1288 104 HOH HOH . K 4 HOH A 189 1289 123 HOH HOH . K 4 HOH A 190 1290 211 HOH HOH . K 4 HOH A 191 1291 24 HOH HOH . K 4 HOH A 192 1292 121 HOH HOH . K 4 HOH A 193 1293 209 HOH HOH . K 4 HOH A 194 1294 185 HOH HOH . K 4 HOH A 195 1295 44 HOH HOH . K 4 HOH A 196 1296 299 HOH HOH . K 4 HOH A 197 1297 193 HOH HOH . K 4 HOH A 198 1298 170 HOH HOH . K 4 HOH A 199 1299 4 HOH HOH . K 4 HOH A 200 1300 229 HOH HOH . K 4 HOH A 201 1301 128 HOH HOH . K 4 HOH A 202 1302 206 HOH HOH . K 4 HOH A 203 1303 21 HOH HOH . K 4 HOH A 204 1304 180 HOH HOH . K 4 HOH A 205 1305 29 HOH HOH . K 4 HOH A 206 1306 208 HOH HOH . K 4 HOH A 207 1307 129 HOH HOH . K 4 HOH A 208 1308 222 HOH HOH . K 4 HOH A 209 1309 138 HOH HOH . K 4 HOH A 210 1310 66 HOH HOH . K 4 HOH A 211 1311 264 HOH HOH . K 4 HOH A 212 1312 176 HOH HOH . K 4 HOH A 213 1313 287 HOH HOH . K 4 HOH A 214 1314 92 HOH HOH . K 4 HOH A 215 1315 163 HOH HOH . K 4 HOH A 216 1316 198 HOH HOH . K 4 HOH A 217 1317 110 HOH HOH . K 4 HOH A 218 1318 246 HOH HOH . K 4 HOH A 219 1319 23 HOH HOH . K 4 HOH A 220 1320 240 HOH HOH . K 4 HOH A 221 1321 259 HOH HOH . K 4 HOH A 222 1322 102 HOH HOH . K 4 HOH A 223 1323 248 HOH HOH . K 4 HOH A 224 1324 197 HOH HOH . K 4 HOH A 225 1325 247 HOH HOH . K 4 HOH A 226 1326 250 HOH HOH . K 4 HOH A 227 1327 47 HOH HOH . K 4 HOH A 228 1328 234 HOH HOH . K 4 HOH A 229 1329 282 HOH HOH . K 4 HOH A 230 1330 223 HOH HOH . K 4 HOH A 231 1331 125 HOH HOH . K 4 HOH A 232 1332 255 HOH HOH . K 4 HOH A 233 1333 100 HOH HOH . K 4 HOH A 234 1334 196 HOH HOH . K 4 HOH A 235 1335 99 HOH HOH . K 4 HOH A 236 1336 256 HOH HOH . K 4 HOH A 237 1337 157 HOH HOH . K 4 HOH A 238 1338 13 HOH HOH . K 4 HOH A 239 1339 187 HOH HOH . K 4 HOH A 240 1340 162 HOH HOH . K 4 HOH A 241 1341 71 HOH HOH . K 4 HOH A 242 1342 214 HOH HOH . K 4 HOH A 243 1343 165 HOH HOH . K 4 HOH A 244 1344 263 HOH HOH . K 4 HOH A 245 1345 173 HOH HOH . K 4 HOH A 246 1346 182 HOH HOH . K 4 HOH A 247 1347 278 HOH HOH . K 4 HOH A 248 1348 117 HOH HOH . K 4 HOH A 249 1349 33 HOH HOH . K 4 HOH A 250 1350 131 HOH HOH . K 4 HOH A 251 1351 109 HOH HOH . K 4 HOH A 252 1352 55 HOH HOH . K 4 HOH A 253 1353 203 HOH HOH . K 4 HOH A 254 1354 155 HOH HOH . K 4 HOH A 255 1355 233 HOH HOH . K 4 HOH A 256 1356 212 HOH HOH . K 4 HOH A 257 1357 167 HOH HOH . K 4 HOH A 258 1358 76 HOH HOH . K 4 HOH A 259 1359 201 HOH HOH . K 4 HOH A 260 1360 191 HOH HOH . K 4 HOH A 261 1361 62 HOH HOH . K 4 HOH A 262 1362 215 HOH HOH . K 4 HOH A 263 1363 143 HOH HOH . K 4 HOH A 264 1364 151 HOH HOH . K 4 HOH A 265 1365 118 HOH HOH . K 4 HOH A 266 1366 84 HOH HOH . K 4 HOH A 267 1367 268 HOH HOH . K 4 HOH A 268 1368 253 HOH HOH . K 4 HOH A 269 1369 190 HOH HOH . K 4 HOH A 270 1370 127 HOH HOH . K 4 HOH A 271 1371 166 HOH HOH . K 4 HOH A 272 1372 210 HOH HOH . K 4 HOH A 273 1373 296 HOH HOH . K 4 HOH A 274 1374 70 HOH HOH . K 4 HOH A 275 1375 103 HOH HOH . K 4 HOH A 276 1376 272 HOH HOH . K 4 HOH A 277 1377 83 HOH HOH . K 4 HOH A 278 1378 146 HOH HOH . K 4 HOH A 279 1379 231 HOH HOH . K 4 HOH A 280 1380 235 HOH HOH . K 4 HOH A 281 1381 254 HOH HOH . K 4 HOH A 282 1382 161 HOH HOH . K 4 HOH A 283 1383 219 HOH HOH . K 4 HOH A 284 1384 77 HOH HOH . K 4 HOH A 285 1385 126 HOH HOH . K 4 HOH A 286 1386 30 HOH HOH . K 4 HOH A 287 1387 205 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.96 _atom_site.Cartn_y 25.103 _atom_site.Cartn_z 28.831 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1007 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #