data_5C0Q # _model_server_result.job_id ygxClgTGK-S2EnS4ol1lRA _model_server_result.datetime_utc '2024-11-05 01:18:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":1006}' # _entry.id 5C0Q # _exptl.entry_id 5C0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 35 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5C0Q _cell.length_a 158.843 _cell.length_b 158.843 _cell.length_c 520.569 _cell.Z_PDB 72 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 1 1 C,D,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 HA N N ? 2 IA N N ? 2 JA N N ? 2 KA N N ? 2 LA N N ? 2 MA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 335 A CYS 335 1_555 A SG CYS 466 A CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 335 B CYS 335 1_555 B SG CYS 466 B CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A NH1 ARG 54 A ARG 54 1_555 H ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc2 A NZ LYS 86 A LYS 86 1_555 N ZN ZN . A ZN 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc3 A OD2 ASP 117 A ASP 117 1_555 E ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc4 A ND1 HIS 161 A HIS 161 1_555 E ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc5 A NE2 HIS 165 A HIS 165 1_555 E ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc6 A OD1 ASP 171 A ASP 171 1_555 F ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc7 A OD2 ASP 171 A ASP 171 1_555 F ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc8 A ND1 HIS 173 A HIS 173 1_555 F ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc9 A OE1 GLU 189 A GLU 189 1_555 G ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc10 A OE2 GLU 189 A GLU 189 1_555 G ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc11 A OD2 ASP 218 A ASP 218 1_555 IA ZN ZN . D ZN 503 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc12 A OE2 GLU 327 A GLU 327 1_555 H ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? metalc ? metalc13 A OE2 GLU 330 A GLU 330 1_555 H ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc14 A OE2 GLU 334 A GLU 334 1_555 J ZN ZN . A ZN 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc15 A OE2 GLU 398 A GLU 398 1_555 I ZN ZN . A ZN 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc16 A NE2 HIS 448 A HIS 448 1_555 J ZN ZN . A ZN 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc17 J ZN ZN . A ZN 1006 1_555 B NZ LYS 86 B LYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? metalc ? metalc18 N ZN ZN . A ZN 1010 1_555 B OE1 GLU 334 B GLU 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc19 N ZN ZN . A ZN 1010 1_555 B NE2 HIS 448 B HIS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc20 B OD2 ASP 117 B ASP 117 1_555 O ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc21 B ND1 HIS 161 B HIS 161 1_555 O ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc22 B NE2 HIS 165 B HIS 165 1_555 O ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc23 B OD1 ASP 171 B ASP 171 1_555 P ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc24 B OD2 ASP 171 B ASP 171 1_555 P ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc25 B ND1 HIS 173 B HIS 173 1_555 P ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc26 B OE2 GLU 189 B GLU 189 1_555 Q ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc27 B OD2 ASP 218 B ASP 218 1_555 AA ZN ZN . C ZN 1004 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc28 B OE2 GLU 286 B GLU 286 1_555 V ZN ZN . B ZN 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc29 B NZ LYS 289 B LYS 289 1_555 V ZN ZN . B ZN 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc30 B OE2 GLU 303 B GLU 303 1_555 W ZN ZN . B ZN 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc31 B OE2 GLU 327 B GLU 327 1_555 R ZN ZN . B ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.711 ? metalc ? metalc32 B OE2 GLU 330 B GLU 330 1_555 R ZN ZN . B ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc33 B OE2 GLU 398 B GLU 398 1_555 S ZN ZN . B ZN 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc34 V ZN ZN . B ZN 1008 3_665 D OD2 ASP 396 D ASP 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc35 C NH2 ARG 54 C ARG 54 1_555 BA ZN ZN . C ZN 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? metalc ? metalc36 C NZ LYS 86 C LYS 86 1_555 FA ZN ZN . C ZN 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc37 C OD2 ASP 117 C ASP 117 1_555 Y ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc38 C ND1 HIS 161 C HIS 161 1_555 Y ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc39 C NE2 HIS 165 C HIS 165 1_555 Y ZN ZN . C ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc40 C OD1 ASP 171 C ASP 171 1_555 Z ZN ZN . C ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc41 C OD2 ASP 171 C ASP 171 1_555 Z ZN ZN . C ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc42 C ND1 HIS 173 C HIS 173 1_555 Z ZN ZN . C ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc43 C OE1 GLU 185 C GLU 185 1_555 CA ZN ZN . C ZN 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc44 C OE1 GLU 189 C GLU 189 1_555 AA ZN ZN . C ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc45 C OE2 GLU 189 C GLU 189 1_555 AA ZN ZN . C ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc46 C OE2 GLU 303 C GLU 303 1_555 DA ZN ZN . C ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc47 C OE2 GLU 327 C GLU 327 1_555 BA ZN ZN . C ZN 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc48 C OE2 GLU 330 C GLU 330 1_555 BA ZN ZN . C ZN 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc49 C OE2 GLU 334 C GLU 334 1_555 X ZN ZN . C ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc50 C NE2 HIS 448 C HIS 448 1_555 X ZN ZN . C ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc51 X ZN ZN . C ZN 1001 1_555 D NZ LYS 86 D LYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc52 FA ZN ZN . C ZN 1009 1_555 D OE2 GLU 334 D GLU 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc53 FA ZN ZN . C ZN 1009 1_555 D NE2 HIS 448 D HIS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc54 D NH2 ARG 54 D ARG 54 1_555 JA ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc55 D OD2 ASP 117 D ASP 117 1_555 GA ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc56 D ND1 HIS 161 D HIS 161 1_555 GA ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc57 D NE2 HIS 161 D HIS 161 1_555 KA ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc58 D NE2 HIS 165 D HIS 165 1_555 GA ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc59 D OD1 ASP 171 D ASP 171 1_555 HA ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc60 D OD2 ASP 171 D ASP 171 1_555 HA ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc61 D ND1 HIS 173 D HIS 173 1_555 HA ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc62 D OE2 GLU 189 D GLU 189 1_555 IA ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc63 D OE2 GLU 303 D GLU 303 1_555 LA ZN ZN . D ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc64 D OE2 GLU 327 D GLU 327 1_555 JA ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc65 D OE1 GLU 330 D GLU 330 1_555 JA ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc66 D NE2 HIS 461 D HIS 461 1_555 MA ZN ZN . D ZN 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5C0Q _atom_sites.fract_transf_matrix[1][1] 0.006296 _atom_sites.fract_transf_matrix[1][2] 0.003635 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007269 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 1001 1001 ZN ZN . F 2 ZN A 1 1002 1002 ZN ZN . G 2 ZN A 1 1003 1003 ZN ZN . H 2 ZN A 1 1004 1004 ZN ZN . I 2 ZN A 1 1005 1005 ZN ZN . J 2 ZN A 1 1006 1006 ZN ZN . K 2 ZN A 1 1007 1007 ZN ZN . L 2 ZN A 1 1008 1008 ZN ZN . M 2 ZN A 1 1009 1009 ZN ZN . N 2 ZN A 1 1010 1006 ZN ZN . O 2 ZN B 1 1001 1001 ZN ZN . P 2 ZN B 1 1002 1002 ZN ZN . Q 2 ZN B 1 1003 1003 ZN ZN . R 2 ZN B 1 1004 1004 ZN ZN . S 2 ZN B 1 1005 1005 ZN ZN . T 2 ZN B 1 1006 1007 ZN ZN . U 2 ZN B 1 1007 1008 ZN ZN . V 2 ZN B 1 1008 1009 ZN ZN . W 2 ZN B 1 1009 1010 ZN ZN . X 2 ZN C 1 1001 1001 ZN ZN . Y 2 ZN C 1 1002 1002 ZN ZN . Z 2 ZN C 1 1003 1003 ZN ZN . AA 2 ZN C 1 1004 1004 ZN ZN . BA 2 ZN C 1 1005 1005 ZN ZN . CA 2 ZN C 1 1006 1006 ZN ZN . DA 2 ZN C 1 1007 1007 ZN ZN . EA 2 ZN C 1 1008 1008 ZN ZN . FA 2 ZN C 1 1009 1001 ZN ZN . GA 2 ZN D 1 501 1002 ZN ZN . HA 2 ZN D 1 502 1003 ZN ZN . IA 2 ZN D 1 503 1004 ZN ZN . JA 2 ZN D 1 504 1005 ZN ZN . KA 2 ZN D 1 505 1006 ZN ZN . LA 2 ZN D 1 506 1007 ZN ZN . MA 2 ZN D 1 507 1008 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id CA _atom_site.label_entity_id 2 _atom_site.Cartn_x 73.11 _atom_site.Cartn_y 105.352 _atom_site.Cartn_z 177.817 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 103.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1006 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #