data_5C15 # _model_server_result.job_id KI_CYqk7xc3i3utZNmtqnQ _model_server_result.datetime_utc '2024-10-19 10:25:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":800}' # _entry.id 5C15 # _exptl.entry_id 5C15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.71 _cell.angle_gamma 90 _cell.entry_id 5C15 _cell.length_a 132.766 _cell.length_b 57.365 _cell.length_c 46.646 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 52 A ASP 244 1_555 C MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc2 A OD2 ASP 104 A ASP 296 1_555 B MN MN . A MN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc3 A OD1 ASN 249 A ASN 441 1_555 C MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc4 A OD2 ASP 252 A ASP 444 1_555 C MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc5 B MN MN . A MN 800 1_555 D O HOH . A HOH 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc6 B MN MN . A MN 800 1_555 D O HOH . A HOH 976 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc7 B MN MN . A MN 800 1_555 D O HOH . A HOH 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc8 C MN MN . A MN 801 1_555 D O HOH . A HOH 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc9 C MN MN . A MN 801 1_555 D O HOH . A HOH 976 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc10 C MN MN . A MN 801 1_555 D O HOH . A HOH 1096 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5C15 _atom_sites.fract_transf_matrix[1][1] 0.007532 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001154 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017432 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021688 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 800 800 MN MN . C 2 MN A 1 801 801 MN MN . D 3 HOH A 1 901 150 HOH HOH . D 3 HOH A 2 902 200 HOH HOH . D 3 HOH A 3 903 172 HOH HOH . D 3 HOH A 4 904 79 HOH HOH . D 3 HOH A 5 905 153 HOH HOH . D 3 HOH A 6 906 216 HOH HOH . D 3 HOH A 7 907 257 HOH HOH . D 3 HOH A 8 908 205 HOH HOH . D 3 HOH A 9 909 163 HOH HOH . D 3 HOH A 10 910 89 HOH HOH . D 3 HOH A 11 911 25 HOH HOH . D 3 HOH A 12 912 221 HOH HOH . D 3 HOH A 13 913 54 HOH HOH . D 3 HOH A 14 914 53 HOH HOH . D 3 HOH A 15 915 267 HOH HOH . D 3 HOH A 16 916 223 HOH HOH . D 3 HOH A 17 917 64 HOH HOH . D 3 HOH A 18 918 75 HOH HOH . D 3 HOH A 19 919 164 HOH HOH . D 3 HOH A 20 920 156 HOH HOH . D 3 HOH A 21 921 148 HOH HOH . D 3 HOH A 22 922 77 HOH HOH . D 3 HOH A 23 923 291 HOH HOH . D 3 HOH A 24 924 65 HOH HOH . D 3 HOH A 25 925 157 HOH HOH . D 3 HOH A 26 926 219 HOH HOH . D 3 HOH A 27 927 217 HOH HOH . D 3 HOH A 28 928 49 HOH HOH . D 3 HOH A 29 929 73 HOH HOH . D 3 HOH A 30 930 280 HOH HOH . D 3 HOH A 31 931 209 HOH HOH . D 3 HOH A 32 932 142 HOH HOH . D 3 HOH A 33 933 120 HOH HOH . D 3 HOH A 34 934 188 HOH HOH . D 3 HOH A 35 935 48 HOH HOH . D 3 HOH A 36 936 253 HOH HOH . D 3 HOH A 37 937 96 HOH HOH . D 3 HOH A 38 938 117 HOH HOH . D 3 HOH A 39 939 265 HOH HOH . D 3 HOH A 40 940 85 HOH HOH . D 3 HOH A 41 941 149 HOH HOH . D 3 HOH A 42 942 135 HOH HOH . D 3 HOH A 43 943 16 HOH HOH . D 3 HOH A 44 944 28 HOH HOH . D 3 HOH A 45 945 287 HOH HOH . D 3 HOH A 46 946 100 HOH HOH . D 3 HOH A 47 947 45 HOH HOH . D 3 HOH A 48 948 13 HOH HOH . D 3 HOH A 49 949 15 HOH HOH . D 3 HOH A 50 950 41 HOH HOH . D 3 HOH A 51 951 51 HOH HOH . D 3 HOH A 52 952 52 HOH HOH . D 3 HOH A 53 953 93 HOH HOH . D 3 HOH A 54 954 76 HOH HOH . D 3 HOH A 55 955 78 HOH HOH . D 3 HOH A 56 956 27 HOH HOH . D 3 HOH A 57 957 132 HOH HOH . D 3 HOH A 58 958 36 HOH HOH . D 3 HOH A 59 959 138 HOH HOH . D 3 HOH A 60 960 101 HOH HOH . D 3 HOH A 61 961 86 HOH HOH . D 3 HOH A 62 962 133 HOH HOH . D 3 HOH A 63 963 266 HOH HOH . D 3 HOH A 64 964 137 HOH HOH . D 3 HOH A 65 965 3 HOH HOH . D 3 HOH A 66 966 118 HOH HOH . D 3 HOH A 67 967 235 HOH HOH . D 3 HOH A 68 968 179 HOH HOH . D 3 HOH A 69 969 50 HOH HOH . D 3 HOH A 70 970 128 HOH HOH . D 3 HOH A 71 971 270 HOH HOH . D 3 HOH A 72 972 9 HOH HOH . D 3 HOH A 73 973 72 HOH HOH . D 3 HOH A 74 974 109 HOH HOH . D 3 HOH A 75 975 136 HOH HOH . D 3 HOH A 76 976 1 HOH HOH . D 3 HOH A 77 977 130 HOH HOH . D 3 HOH A 78 978 271 HOH HOH . D 3 HOH A 79 979 102 HOH HOH . D 3 HOH A 80 980 66 HOH HOH . D 3 HOH A 81 981 212 HOH HOH . D 3 HOH A 82 982 125 HOH HOH . D 3 HOH A 83 983 11 HOH HOH . D 3 HOH A 84 984 18 HOH HOH . D 3 HOH A 85 985 59 HOH HOH . D 3 HOH A 86 986 14 HOH HOH . D 3 HOH A 87 987 17 HOH HOH . D 3 HOH A 88 988 115 HOH HOH . D 3 HOH A 89 989 43 HOH HOH . D 3 HOH A 90 990 105 HOH HOH . D 3 HOH A 91 991 203 HOH HOH . D 3 HOH A 92 992 159 HOH HOH . D 3 HOH A 93 993 56 HOH HOH . D 3 HOH A 94 994 251 HOH HOH . D 3 HOH A 95 995 8 HOH HOH . D 3 HOH A 96 996 68 HOH HOH . D 3 HOH A 97 997 12 HOH HOH . D 3 HOH A 98 998 144 HOH HOH . D 3 HOH A 99 999 90 HOH HOH . D 3 HOH A 100 1000 47 HOH HOH . D 3 HOH A 101 1001 5 HOH HOH . D 3 HOH A 102 1002 84 HOH HOH . D 3 HOH A 103 1003 19 HOH HOH . D 3 HOH A 104 1004 44 HOH HOH . D 3 HOH A 105 1005 259 HOH HOH . D 3 HOH A 106 1006 143 HOH HOH . D 3 HOH A 107 1007 264 HOH HOH . D 3 HOH A 108 1008 98 HOH HOH . D 3 HOH A 109 1009 94 HOH HOH . D 3 HOH A 110 1010 104 HOH HOH . D 3 HOH A 111 1011 141 HOH HOH . D 3 HOH A 112 1012 74 HOH HOH . D 3 HOH A 113 1013 213 HOH HOH . D 3 HOH A 114 1014 7 HOH HOH . D 3 HOH A 115 1015 40 HOH HOH . D 3 HOH A 116 1016 71 HOH HOH . D 3 HOH A 117 1017 20 HOH HOH . D 3 HOH A 118 1018 233 HOH HOH . D 3 HOH A 119 1019 39 HOH HOH . D 3 HOH A 120 1020 10 HOH HOH . D 3 HOH A 121 1021 6 HOH HOH . D 3 HOH A 122 1022 62 HOH HOH . D 3 HOH A 123 1023 237 HOH HOH . D 3 HOH A 124 1024 178 HOH HOH . D 3 HOH A 125 1025 246 HOH HOH . D 3 HOH A 126 1026 131 HOH HOH . D 3 HOH A 127 1027 124 HOH HOH . D 3 HOH A 128 1028 106 HOH HOH . D 3 HOH A 129 1029 22 HOH HOH . D 3 HOH A 130 1030 33 HOH HOH . D 3 HOH A 131 1031 35 HOH HOH . D 3 HOH A 132 1032 194 HOH HOH . D 3 HOH A 133 1033 283 HOH HOH . D 3 HOH A 134 1034 70 HOH HOH . D 3 HOH A 135 1035 126 HOH HOH . D 3 HOH A 136 1036 155 HOH HOH . D 3 HOH A 137 1037 34 HOH HOH . D 3 HOH A 138 1038 37 HOH HOH . D 3 HOH A 139 1039 261 HOH HOH . D 3 HOH A 140 1040 29 HOH HOH . D 3 HOH A 141 1041 152 HOH HOH . D 3 HOH A 142 1042 4 HOH HOH . D 3 HOH A 143 1043 167 HOH HOH . D 3 HOH A 144 1044 87 HOH HOH . D 3 HOH A 145 1045 202 HOH HOH . D 3 HOH A 146 1046 119 HOH HOH . D 3 HOH A 147 1047 58 HOH HOH . D 3 HOH A 148 1048 26 HOH HOH . D 3 HOH A 149 1049 24 HOH HOH . D 3 HOH A 150 1050 80 HOH HOH . D 3 HOH A 151 1051 175 HOH HOH . D 3 HOH A 152 1052 262 HOH HOH . D 3 HOH A 153 1053 220 HOH HOH . D 3 HOH A 154 1054 187 HOH HOH . D 3 HOH A 155 1055 249 HOH HOH . D 3 HOH A 156 1056 288 HOH HOH . D 3 HOH A 157 1057 174 HOH HOH . D 3 HOH A 158 1058 42 HOH HOH . D 3 HOH A 159 1059 171 HOH HOH . D 3 HOH A 160 1060 57 HOH HOH . D 3 HOH A 161 1061 82 HOH HOH . D 3 HOH A 162 1062 108 HOH HOH . D 3 HOH A 163 1063 55 HOH HOH . D 3 HOH A 164 1064 67 HOH HOH . D 3 HOH A 165 1065 180 HOH HOH . D 3 HOH A 166 1066 134 HOH HOH . D 3 HOH A 167 1067 32 HOH HOH . D 3 HOH A 168 1068 92 HOH HOH . D 3 HOH A 169 1069 69 HOH HOH . D 3 HOH A 170 1070 201 HOH HOH . D 3 HOH A 171 1071 193 HOH HOH . D 3 HOH A 172 1072 122 HOH HOH . D 3 HOH A 173 1073 227 HOH HOH . D 3 HOH A 174 1074 46 HOH HOH . D 3 HOH A 175 1075 60 HOH HOH . D 3 HOH A 176 1076 228 HOH HOH . D 3 HOH A 177 1077 21 HOH HOH . D 3 HOH A 178 1078 97 HOH HOH . D 3 HOH A 179 1079 289 HOH HOH . D 3 HOH A 180 1080 83 HOH HOH . D 3 HOH A 181 1081 95 HOH HOH . D 3 HOH A 182 1082 185 HOH HOH . D 3 HOH A 183 1083 182 HOH HOH . D 3 HOH A 184 1084 225 HOH HOH . D 3 HOH A 185 1085 23 HOH HOH . D 3 HOH A 186 1086 107 HOH HOH . D 3 HOH A 187 1087 292 HOH HOH . D 3 HOH A 188 1088 192 HOH HOH . D 3 HOH A 189 1089 158 HOH HOH . D 3 HOH A 190 1090 247 HOH HOH . D 3 HOH A 191 1091 88 HOH HOH . D 3 HOH A 192 1092 250 HOH HOH . D 3 HOH A 193 1093 31 HOH HOH . D 3 HOH A 194 1094 208 HOH HOH . D 3 HOH A 195 1095 190 HOH HOH . D 3 HOH A 196 1096 139 HOH HOH . D 3 HOH A 197 1097 30 HOH HOH . D 3 HOH A 198 1098 61 HOH HOH . D 3 HOH A 199 1099 248 HOH HOH . D 3 HOH A 200 1100 210 HOH HOH . D 3 HOH A 201 1101 140 HOH HOH . D 3 HOH A 202 1102 244 HOH HOH . D 3 HOH A 203 1103 103 HOH HOH . D 3 HOH A 204 1104 176 HOH HOH . D 3 HOH A 205 1105 112 HOH HOH . D 3 HOH A 206 1106 242 HOH HOH . D 3 HOH A 207 1107 2 HOH HOH . D 3 HOH A 208 1108 116 HOH HOH . D 3 HOH A 209 1109 239 HOH HOH . D 3 HOH A 210 1110 63 HOH HOH . D 3 HOH A 211 1111 160 HOH HOH . D 3 HOH A 212 1112 215 HOH HOH . D 3 HOH A 213 1113 189 HOH HOH . D 3 HOH A 214 1114 196 HOH HOH . D 3 HOH A 215 1115 145 HOH HOH . D 3 HOH A 216 1116 114 HOH HOH . D 3 HOH A 217 1117 273 HOH HOH . D 3 HOH A 218 1118 166 HOH HOH . D 3 HOH A 219 1119 110 HOH HOH . D 3 HOH A 220 1120 240 HOH HOH . D 3 HOH A 221 1121 255 HOH HOH . D 3 HOH A 222 1122 275 HOH HOH . D 3 HOH A 223 1123 154 HOH HOH . D 3 HOH A 224 1124 206 HOH HOH . D 3 HOH A 225 1125 258 HOH HOH . D 3 HOH A 226 1126 162 HOH HOH . D 3 HOH A 227 1127 129 HOH HOH . D 3 HOH A 228 1128 232 HOH HOH . D 3 HOH A 229 1129 230 HOH HOH . D 3 HOH A 230 1130 146 HOH HOH . D 3 HOH A 231 1131 277 HOH HOH . D 3 HOH A 232 1132 226 HOH HOH . D 3 HOH A 233 1133 151 HOH HOH . D 3 HOH A 234 1134 191 HOH HOH . D 3 HOH A 235 1135 278 HOH HOH . D 3 HOH A 236 1136 147 HOH HOH . D 3 HOH A 237 1137 186 HOH HOH . D 3 HOH A 238 1138 290 HOH HOH . D 3 HOH A 239 1139 269 HOH HOH . D 3 HOH A 240 1140 177 HOH HOH . D 3 HOH A 241 1141 272 HOH HOH . D 3 HOH A 242 1142 276 HOH HOH . D 3 HOH A 243 1143 123 HOH HOH . D 3 HOH A 244 1144 211 HOH HOH . D 3 HOH A 245 1145 113 HOH HOH . D 3 HOH A 246 1146 231 HOH HOH . D 3 HOH A 247 1147 285 HOH HOH . D 3 HOH A 248 1148 81 HOH HOH . D 3 HOH A 249 1149 99 HOH HOH . D 3 HOH A 250 1150 91 HOH HOH . D 3 HOH A 251 1151 218 HOH HOH . D 3 HOH A 252 1152 184 HOH HOH . D 3 HOH A 253 1153 121 HOH HOH . D 3 HOH A 254 1154 199 HOH HOH . D 3 HOH A 255 1155 165 HOH HOH . D 3 HOH A 256 1156 243 HOH HOH . D 3 HOH A 257 1157 170 HOH HOH . D 3 HOH A 258 1158 111 HOH HOH . D 3 HOH A 259 1159 127 HOH HOH . D 3 HOH A 260 1160 256 HOH HOH . D 3 HOH A 261 1161 38 HOH HOH . D 3 HOH A 262 1162 173 HOH HOH . D 3 HOH A 263 1163 181 HOH HOH . D 3 HOH A 264 1164 214 HOH HOH . D 3 HOH A 265 1165 260 HOH HOH . D 3 HOH A 266 1166 279 HOH HOH . D 3 HOH A 267 1167 222 HOH HOH . D 3 HOH A 268 1168 183 HOH HOH . D 3 HOH A 269 1169 161 HOH HOH . D 3 HOH A 270 1170 229 HOH HOH . D 3 HOH A 271 1171 224 HOH HOH . D 3 HOH A 272 1172 169 HOH HOH . D 3 HOH A 273 1173 198 HOH HOH . D 3 HOH A 274 1174 281 HOH HOH . D 3 HOH A 275 1175 254 HOH HOH . D 3 HOH A 276 1176 197 HOH HOH . D 3 HOH A 277 1177 207 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 45.924 _atom_site.Cartn_y 47.291 _atom_site.Cartn_z 17.607 _atom_site.occupancy 0.68 _atom_site.B_iso_or_equiv 65.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 800 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 113 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 388 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #