data_5C1H # _model_server_result.job_id MGB_uaLbfZ8fxxC1lc4qfg _model_server_result.datetime_utc '2025-02-18 06:42:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c1h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 5C1H # _exptl.entry_id 5C1H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C1H _cell.length_a 52.63 _cell.length_b 149.36 _cell.length_c 79.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 39.86 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 154 A ASP 211 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc2 A OD1 ASP 156 A ASP 213 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc3 B MN MN . A MN 401 1_555 C O2A GDU . A GDU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc4 B MN MN . A MN 401 1_555 C O2B GDU . A GDU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 367 n n C1 C2 PGE sing 368 n n C1 H1 PGE sing 369 n n C1 H12 PGE sing 370 n n O1 HO1 PGE sing 371 n n C2 O2 PGE sing 372 n n C2 H2 PGE sing 373 n n C2 H22 PGE sing 374 n n O2 C3 PGE sing 375 n n C3 C4 PGE sing 376 n n C3 H3 PGE sing 377 n n C3 H32 PGE sing 378 n n C4 O3 PGE sing 379 n n C4 H4 PGE sing 380 n n C4 H42 PGE sing 381 n n O4 C6 PGE sing 382 n n O4 HO4 PGE sing 383 n n C6 C5 PGE sing 384 n n C6 H6 PGE sing 385 n n C6 H62 PGE sing 386 n n C5 O3 PGE sing 387 n n C5 H5 PGE sing 388 n n C5 H52 PGE sing 389 n n # _atom_sites.entry_id 5C1H _atom_sites.fract_transf_matrix[1][1] 0.019001 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006695 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 401 3 MN MN . C 3 GDU A 1 402 1 GDU GDU . D 4 DA8 A 1 403 1 DA8 DA8 . E 5 PGE A 1 404 1 PGE PGE . F 6 HOH A 1 501 297 HOH HOH . F 6 HOH A 2 502 216 HOH HOH . F 6 HOH A 3 503 238 HOH HOH . F 6 HOH A 4 504 152 HOH HOH . F 6 HOH A 5 505 40 HOH HOH . F 6 HOH A 6 506 31 HOH HOH . F 6 HOH A 7 507 39 HOH HOH . F 6 HOH A 8 508 292 HOH HOH . F 6 HOH A 9 509 82 HOH HOH . F 6 HOH A 10 510 203 HOH HOH . F 6 HOH A 11 511 189 HOH HOH . F 6 HOH A 12 512 268 HOH HOH . F 6 HOH A 13 513 57 HOH HOH . F 6 HOH A 14 514 159 HOH HOH . F 6 HOH A 15 515 98 HOH HOH . F 6 HOH A 16 516 78 HOH HOH . F 6 HOH A 17 517 11 HOH HOH . F 6 HOH A 18 518 300 HOH HOH . F 6 HOH A 19 519 84 HOH HOH . F 6 HOH A 20 520 61 HOH HOH . F 6 HOH A 21 521 116 HOH HOH . F 6 HOH A 22 522 166 HOH HOH . F 6 HOH A 23 523 172 HOH HOH . F 6 HOH A 24 524 160 HOH HOH . F 6 HOH A 25 525 33 HOH HOH . F 6 HOH A 26 526 41 HOH HOH . F 6 HOH A 27 527 114 HOH HOH . F 6 HOH A 28 528 124 HOH HOH . F 6 HOH A 29 529 130 HOH HOH . F 6 HOH A 30 530 123 HOH HOH . F 6 HOH A 31 531 55 HOH HOH . F 6 HOH A 32 532 167 HOH HOH . F 6 HOH A 33 533 87 HOH HOH . F 6 HOH A 34 534 121 HOH HOH . F 6 HOH A 35 535 88 HOH HOH . F 6 HOH A 36 536 138 HOH HOH . F 6 HOH A 37 537 131 HOH HOH . F 6 HOH A 38 538 76 HOH HOH . F 6 HOH A 39 539 45 HOH HOH . F 6 HOH A 40 540 15 HOH HOH . F 6 HOH A 41 541 177 HOH HOH . F 6 HOH A 42 542 28 HOH HOH . F 6 HOH A 43 543 149 HOH HOH . F 6 HOH A 44 544 10 HOH HOH . F 6 HOH A 45 545 112 HOH HOH . F 6 HOH A 46 546 63 HOH HOH . F 6 HOH A 47 547 13 HOH HOH . F 6 HOH A 48 548 187 HOH HOH . F 6 HOH A 49 549 43 HOH HOH . F 6 HOH A 50 550 162 HOH HOH . F 6 HOH A 51 551 5 HOH HOH . F 6 HOH A 52 552 46 HOH HOH . F 6 HOH A 53 553 106 HOH HOH . F 6 HOH A 54 554 278 HOH HOH . F 6 HOH A 55 555 174 HOH HOH . F 6 HOH A 56 556 27 HOH HOH . F 6 HOH A 57 557 66 HOH HOH . F 6 HOH A 58 558 150 HOH HOH . F 6 HOH A 59 559 32 HOH HOH . F 6 HOH A 60 560 8 HOH HOH . F 6 HOH A 61 561 179 HOH HOH . F 6 HOH A 62 562 64 HOH HOH . F 6 HOH A 63 563 134 HOH HOH . F 6 HOH A 64 564 274 HOH HOH . F 6 HOH A 65 565 34 HOH HOH . F 6 HOH A 66 566 60 HOH HOH . F 6 HOH A 67 567 103 HOH HOH . F 6 HOH A 68 568 36 HOH HOH . F 6 HOH A 69 569 113 HOH HOH . F 6 HOH A 70 570 2 HOH HOH . F 6 HOH A 71 571 100 HOH HOH . F 6 HOH A 72 572 79 HOH HOH . F 6 HOH A 73 573 69 HOH HOH . F 6 HOH A 74 574 49 HOH HOH . F 6 HOH A 75 575 155 HOH HOH . F 6 HOH A 76 576 51 HOH HOH . F 6 HOH A 77 577 85 HOH HOH . F 6 HOH A 78 578 249 HOH HOH . F 6 HOH A 79 579 296 HOH HOH . F 6 HOH A 80 580 18 HOH HOH . F 6 HOH A 81 581 23 HOH HOH . F 6 HOH A 82 582 37 HOH HOH . F 6 HOH A 83 583 120 HOH HOH . F 6 HOH A 84 584 146 HOH HOH . F 6 HOH A 85 585 173 HOH HOH . F 6 HOH A 86 586 20 HOH HOH . F 6 HOH A 87 587 232 HOH HOH . F 6 HOH A 88 588 38 HOH HOH . F 6 HOH A 89 589 47 HOH HOH . F 6 HOH A 90 590 94 HOH HOH . F 6 HOH A 91 591 26 HOH HOH . F 6 HOH A 92 592 156 HOH HOH . F 6 HOH A 93 593 192 HOH HOH . F 6 HOH A 94 594 4 HOH HOH . F 6 HOH A 95 595 90 HOH HOH . F 6 HOH A 96 596 195 HOH HOH . F 6 HOH A 97 597 71 HOH HOH . F 6 HOH A 98 598 127 HOH HOH . F 6 HOH A 99 599 140 HOH HOH . F 6 HOH A 100 600 3 HOH HOH . F 6 HOH A 101 601 44 HOH HOH . F 6 HOH A 102 602 9 HOH HOH . F 6 HOH A 103 603 53 HOH HOH . F 6 HOH A 104 604 168 HOH HOH . F 6 HOH A 105 605 62 HOH HOH . F 6 HOH A 106 606 7 HOH HOH . F 6 HOH A 107 607 230 HOH HOH . F 6 HOH A 108 608 250 HOH HOH . F 6 HOH A 109 609 1 HOH HOH . F 6 HOH A 110 610 25 HOH HOH . F 6 HOH A 111 611 184 HOH HOH . F 6 HOH A 112 612 222 HOH HOH . F 6 HOH A 113 613 58 HOH HOH . F 6 HOH A 114 614 30 HOH HOH . F 6 HOH A 115 615 22 HOH HOH . F 6 HOH A 116 616 276 HOH HOH . F 6 HOH A 117 617 16 HOH HOH . F 6 HOH A 118 618 201 HOH HOH . F 6 HOH A 119 619 243 HOH HOH . F 6 HOH A 120 620 83 HOH HOH . F 6 HOH A 121 621 163 HOH HOH . F 6 HOH A 122 622 21 HOH HOH . F 6 HOH A 123 623 298 HOH HOH . F 6 HOH A 124 624 50 HOH HOH . F 6 HOH A 125 625 97 HOH HOH . F 6 HOH A 126 626 115 HOH HOH . F 6 HOH A 127 627 89 HOH HOH . F 6 HOH A 128 628 12 HOH HOH . F 6 HOH A 129 629 74 HOH HOH . F 6 HOH A 130 630 186 HOH HOH . F 6 HOH A 131 631 24 HOH HOH . F 6 HOH A 132 632 95 HOH HOH . F 6 HOH A 133 633 132 HOH HOH . F 6 HOH A 134 634 42 HOH HOH . F 6 HOH A 135 635 14 HOH HOH . F 6 HOH A 136 636 93 HOH HOH . F 6 HOH A 137 637 68 HOH HOH . F 6 HOH A 138 638 188 HOH HOH . F 6 HOH A 139 639 80 HOH HOH . F 6 HOH A 140 640 169 HOH HOH . F 6 HOH A 141 641 247 HOH HOH . F 6 HOH A 142 642 81 HOH HOH . F 6 HOH A 143 643 234 HOH HOH . F 6 HOH A 144 644 267 HOH HOH . F 6 HOH A 145 645 251 HOH HOH . F 6 HOH A 146 646 35 HOH HOH . F 6 HOH A 147 647 128 HOH HOH . F 6 HOH A 148 648 185 HOH HOH . F 6 HOH A 149 649 56 HOH HOH . F 6 HOH A 150 650 119 HOH HOH . F 6 HOH A 151 651 141 HOH HOH . F 6 HOH A 152 652 126 HOH HOH . F 6 HOH A 153 653 19 HOH HOH . F 6 HOH A 154 654 65 HOH HOH . F 6 HOH A 155 655 111 HOH HOH . F 6 HOH A 156 656 48 HOH HOH . F 6 HOH A 157 657 54 HOH HOH . F 6 HOH A 158 658 6 HOH HOH . F 6 HOH A 159 659 175 HOH HOH . F 6 HOH A 160 660 59 HOH HOH . F 6 HOH A 161 661 109 HOH HOH . F 6 HOH A 162 662 17 HOH HOH . F 6 HOH A 163 663 202 HOH HOH . F 6 HOH A 164 664 191 HOH HOH . F 6 HOH A 165 665 118 HOH HOH . F 6 HOH A 166 666 122 HOH HOH . F 6 HOH A 167 667 164 HOH HOH . F 6 HOH A 168 668 171 HOH HOH . F 6 HOH A 169 669 136 HOH HOH . F 6 HOH A 170 670 129 HOH HOH . F 6 HOH A 171 671 91 HOH HOH . F 6 HOH A 172 672 135 HOH HOH . F 6 HOH A 173 673 183 HOH HOH . F 6 HOH A 174 674 70 HOH HOH . F 6 HOH A 175 675 96 HOH HOH . F 6 HOH A 176 676 105 HOH HOH . F 6 HOH A 177 677 67 HOH HOH . F 6 HOH A 178 678 72 HOH HOH . F 6 HOH A 179 679 157 HOH HOH . F 6 HOH A 180 680 110 HOH HOH . F 6 HOH A 181 681 277 HOH HOH . F 6 HOH A 182 682 204 HOH HOH . F 6 HOH A 183 683 73 HOH HOH . F 6 HOH A 184 684 52 HOH HOH . F 6 HOH A 185 685 245 HOH HOH . F 6 HOH A 186 686 294 HOH HOH . F 6 HOH A 187 687 190 HOH HOH . F 6 HOH A 188 688 194 HOH HOH . F 6 HOH A 189 689 143 HOH HOH . F 6 HOH A 190 690 197 HOH HOH . F 6 HOH A 191 691 165 HOH HOH . F 6 HOH A 192 692 193 HOH HOH . F 6 HOH A 193 693 77 HOH HOH . F 6 HOH A 194 694 211 HOH HOH . F 6 HOH A 195 695 199 HOH HOH . F 6 HOH A 196 696 99 HOH HOH . F 6 HOH A 197 697 233 HOH HOH . F 6 HOH A 198 698 86 HOH HOH . F 6 HOH A 199 699 29 HOH HOH . F 6 HOH A 200 700 148 HOH HOH . F 6 HOH A 201 701 262 HOH HOH . F 6 HOH A 202 702 153 HOH HOH . F 6 HOH A 203 703 293 HOH HOH . F 6 HOH A 204 704 255 HOH HOH . F 6 HOH A 205 705 282 HOH HOH . F 6 HOH A 206 706 236 HOH HOH . F 6 HOH A 207 707 241 HOH HOH . F 6 HOH A 208 708 235 HOH HOH . F 6 HOH A 209 709 288 HOH HOH . F 6 HOH A 210 710 144 HOH HOH . F 6 HOH A 211 711 104 HOH HOH . F 6 HOH A 212 712 221 HOH HOH . F 6 HOH A 213 713 242 HOH HOH . F 6 HOH A 214 714 248 HOH HOH . F 6 HOH A 215 715 228 HOH HOH . F 6 HOH A 216 716 224 HOH HOH . F 6 HOH A 217 717 231 HOH HOH . F 6 HOH A 218 718 244 HOH HOH . F 6 HOH A 219 719 207 HOH HOH . F 6 HOH A 220 720 226 HOH HOH . F 6 HOH A 221 721 206 HOH HOH . F 6 HOH A 222 722 301 HOH HOH . F 6 HOH A 223 723 270 HOH HOH . F 6 HOH A 224 724 220 HOH HOH . F 6 HOH A 225 725 264 HOH HOH . F 6 HOH A 226 726 215 HOH HOH . F 6 HOH A 227 727 218 HOH HOH . F 6 HOH A 228 728 246 HOH HOH . F 6 HOH A 229 729 212 HOH HOH . F 6 HOH A 230 730 227 HOH HOH . F 6 HOH A 231 731 208 HOH HOH . F 6 HOH A 232 732 229 HOH HOH . F 6 HOH A 233 733 239 HOH HOH . F 6 HOH A 234 734 209 HOH HOH . F 6 HOH A 235 735 252 HOH HOH . F 6 HOH A 236 736 210 HOH HOH . F 6 HOH A 237 737 225 HOH HOH . F 6 HOH A 238 738 303 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PGE . . . E 5 19.582 -13.369 20.457 1 35.63 ? O2 PGE 404 A 1 HETATM 2 C C3 PGE . . . E 5 20.638 -14.313 20.631 1 36.1 ? C3 PGE 404 A 1 HETATM 3 C C4 PGE . . . E 5 21.493 -14.363 19.378 1 35.68 ? C4 PGE 404 A 1 HETATM 4 O O4 PGE . . . E 5 22.499 -14.414 15.537 1 26.73 ? O4 PGE 404 A 1 HETATM 5 C C6 PGE . . . E 5 22.916 -14.883 16.842 1 32.22 ? C6 PGE 404 A 1 HETATM 6 C C5 PGE . . . E 5 21.967 -15.913 17.466 1 31.54 ? C5 PGE 404 A 1 HETATM 7 O O3 PGE . . . E 5 21.218 -15.562 18.647 1 30.75 ? O3 PGE 404 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 879 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 7 #