data_5C27
#
_model_server_result.job_id            O9q7n3LFTnREG_2Zgcq10g 
_model_server_result.datetime_utc      '2024-12-22 01:47:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5c27 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":702}' 
#
_entry.id    5C27 
#
_exptl.entry_id    5C27 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5C27 
_cell.length_a            39.879 
_cell.length_b            84.875 
_cell.length_c            89.592 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5C27 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASN 182 A ASN 524 1_555 A N PTR 183 A PTR 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C PTR 183 A PTR 525 1_555 A N PTR 184 A PTR 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale3 A C PTR 184 A PTR 526 1_555 A N LYS 185 A LYS 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 198 n n 
C1 C2 GOL sing 199 n n 
C1 H11 GOL sing 200 n n 
C1 H12 GOL sing 201 n n 
O1 HO1 GOL sing 202 n n 
C2 O2 GOL sing 203 n n 
C2 C3 GOL sing 204 n n 
C2 H2 GOL sing 205 n n 
O2 HO2 GOL sing 206 n n 
C3 O3 GOL sing 207 n n 
C3 H31 GOL sing 208 n n 
C3 H32 GOL sing 209 n n 
O3 HO3 GOL sing 210 n n 
#
_atom_sites.entry_id                     5C27 
_atom_sites.fract_transf_matrix[1][1]    0.025076 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011782 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011162 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 50J A 1 701 1 50J INH . 
D 4 GOL A 1 702 1 GOL GOL . 
E 5 HOH A 1 801 123 HOH HOH . 
E 5 HOH A 2 802 71 HOH HOH . 
E 5 HOH A 3 803 142 HOH HOH . 
E 5 HOH A 4 804 155 HOH HOH . 
E 5 HOH A 5 805 93 HOH HOH . 
E 5 HOH A 6 806 89 HOH HOH . 
E 5 HOH A 7 807 147 HOH HOH . 
E 5 HOH A 8 808 177 HOH HOH . 
E 5 HOH A 9 809 19 HOH HOH . 
E 5 HOH A 10 810 80 HOH HOH . 
E 5 HOH A 11 811 191 HOH HOH . 
E 5 HOH A 12 812 174 HOH HOH . 
E 5 HOH A 13 813 182 HOH HOH . 
E 5 HOH A 14 814 92 HOH HOH . 
E 5 HOH A 15 815 22 HOH HOH . 
E 5 HOH A 16 816 90 HOH HOH . 
E 5 HOH A 17 817 6 HOH HOH . 
E 5 HOH A 18 818 55 HOH HOH . 
E 5 HOH A 19 819 4 HOH HOH . 
E 5 HOH A 20 820 62 HOH HOH . 
E 5 HOH A 21 821 54 HOH HOH . 
E 5 HOH A 22 822 33 HOH HOH . 
E 5 HOH A 23 823 53 HOH HOH . 
E 5 HOH A 24 824 138 HOH HOH . 
E 5 HOH A 25 825 170 HOH HOH . 
E 5 HOH A 26 826 13 HOH HOH . 
E 5 HOH A 27 827 125 HOH HOH . 
E 5 HOH A 28 828 126 HOH HOH . 
E 5 HOH A 29 829 40 HOH HOH . 
E 5 HOH A 30 830 166 HOH HOH . 
E 5 HOH A 31 831 12 HOH HOH . 
E 5 HOH A 32 832 74 HOH HOH . 
E 5 HOH A 33 833 61 HOH HOH . 
E 5 HOH A 34 834 148 HOH HOH . 
E 5 HOH A 35 835 73 HOH HOH . 
E 5 HOH A 36 836 171 HOH HOH . 
E 5 HOH A 37 837 72 HOH HOH . 
E 5 HOH A 38 838 167 HOH HOH . 
E 5 HOH A 39 839 137 HOH HOH . 
E 5 HOH A 40 840 136 HOH HOH . 
E 5 HOH A 41 841 27 HOH HOH . 
E 5 HOH A 42 842 156 HOH HOH . 
E 5 HOH A 43 843 109 HOH HOH . 
E 5 HOH A 44 844 11 HOH HOH . 
E 5 HOH A 45 845 26 HOH HOH . 
E 5 HOH A 46 846 120 HOH HOH . 
E 5 HOH A 47 847 110 HOH HOH . 
E 5 HOH A 48 848 47 HOH HOH . 
E 5 HOH A 49 849 20 HOH HOH . 
E 5 HOH A 50 850 37 HOH HOH . 
E 5 HOH A 51 851 115 HOH HOH . 
E 5 HOH A 52 852 97 HOH HOH . 
E 5 HOH A 53 853 46 HOH HOH . 
E 5 HOH A 54 854 18 HOH HOH . 
E 5 HOH A 55 855 31 HOH HOH . 
E 5 HOH A 56 856 181 HOH HOH . 
E 5 HOH A 57 857 8 HOH HOH . 
E 5 HOH A 58 858 36 HOH HOH . 
E 5 HOH A 59 859 188 HOH HOH . 
E 5 HOH A 60 860 124 HOH HOH . 
E 5 HOH A 61 861 42 HOH HOH . 
E 5 HOH A 62 862 49 HOH HOH . 
E 5 HOH A 63 863 3 HOH HOH . 
E 5 HOH A 64 864 38 HOH HOH . 
E 5 HOH A 65 865 150 HOH HOH . 
E 5 HOH A 66 866 129 HOH HOH . 
E 5 HOH A 67 867 135 HOH HOH . 
E 5 HOH A 68 868 21 HOH HOH . 
E 5 HOH A 69 869 81 HOH HOH . 
E 5 HOH A 70 870 41 HOH HOH . 
E 5 HOH A 71 871 86 HOH HOH . 
E 5 HOH A 72 872 15 HOH HOH . 
E 5 HOH A 73 873 9 HOH HOH . 
E 5 HOH A 74 874 169 HOH HOH . 
E 5 HOH A 75 875 59 HOH HOH . 
E 5 HOH A 76 876 161 HOH HOH . 
E 5 HOH A 77 877 139 HOH HOH . 
E 5 HOH A 78 878 1 HOH HOH . 
E 5 HOH A 79 879 2 HOH HOH . 
E 5 HOH A 80 880 65 HOH HOH . 
E 5 HOH A 81 881 57 HOH HOH . 
E 5 HOH A 82 882 183 HOH HOH . 
E 5 HOH A 83 883 141 HOH HOH . 
E 5 HOH A 84 884 16 HOH HOH . 
E 5 HOH A 85 885 154 HOH HOH . 
E 5 HOH A 86 886 131 HOH HOH . 
E 5 HOH A 87 887 105 HOH HOH . 
E 5 HOH A 88 888 143 HOH HOH . 
E 5 HOH A 89 889 163 HOH HOH . 
E 5 HOH A 90 890 107 HOH HOH . 
E 5 HOH A 91 891 68 HOH HOH . 
E 5 HOH A 92 892 134 HOH HOH . 
E 5 HOH A 93 893 64 HOH HOH . 
E 5 HOH A 94 894 17 HOH HOH . 
E 5 HOH A 95 895 83 HOH HOH . 
E 5 HOH A 96 896 122 HOH HOH . 
E 5 HOH A 97 897 44 HOH HOH . 
E 5 HOH A 98 898 39 HOH HOH . 
E 5 HOH A 99 899 29 HOH HOH . 
E 5 HOH A 100 900 95 HOH HOH . 
E 5 HOH A 101 901 91 HOH HOH . 
E 5 HOH A 102 902 14 HOH HOH . 
E 5 HOH A 103 903 51 HOH HOH . 
E 5 HOH A 104 904 56 HOH HOH . 
E 5 HOH A 105 905 153 HOH HOH . 
E 5 HOH A 106 906 43 HOH HOH . 
E 5 HOH A 107 907 175 HOH HOH . 
E 5 HOH A 108 908 168 HOH HOH . 
E 5 HOH A 109 909 112 HOH HOH . 
E 5 HOH A 110 910 87 HOH HOH . 
E 5 HOH A 111 911 132 HOH HOH . 
E 5 HOH A 112 912 66 HOH HOH . 
E 5 HOH A 113 913 5 HOH HOH . 
E 5 HOH A 114 914 180 HOH HOH . 
E 5 HOH A 115 915 23 HOH HOH . 
E 5 HOH A 116 916 101 HOH HOH . 
E 5 HOH A 117 917 58 HOH HOH . 
E 5 HOH A 118 918 30 HOH HOH . 
E 5 HOH A 119 919 121 HOH HOH . 
E 5 HOH A 120 920 172 HOH HOH . 
E 5 HOH A 121 921 113 HOH HOH . 
E 5 HOH A 122 922 165 HOH HOH . 
E 5 HOH A 123 923 100 HOH HOH . 
E 5 HOH A 124 924 157 HOH HOH . 
E 5 HOH A 125 925 78 HOH HOH . 
E 5 HOH A 126 926 114 HOH HOH . 
E 5 HOH A 127 927 162 HOH HOH . 
E 5 HOH A 128 928 76 HOH HOH . 
E 5 HOH A 129 929 152 HOH HOH . 
E 5 HOH A 130 930 35 HOH HOH . 
E 5 HOH A 131 931 192 HOH HOH . 
E 5 HOH A 132 932 106 HOH HOH . 
E 5 HOH A 133 933 133 HOH HOH . 
E 5 HOH A 134 934 119 HOH HOH . 
E 5 HOH A 135 935 75 HOH HOH . 
E 5 HOH A 136 936 118 HOH HOH . 
E 5 HOH A 137 937 194 HOH HOH . 
E 5 HOH A 138 938 195 HOH HOH . 
E 5 HOH A 139 939 99 HOH HOH . 
E 5 HOH A 140 940 102 HOH HOH . 
E 5 HOH A 141 941 25 HOH HOH . 
E 5 HOH A 142 942 104 HOH HOH . 
E 5 HOH A 143 943 145 HOH HOH . 
E 5 HOH A 144 944 164 HOH HOH . 
E 5 HOH A 145 945 140 HOH HOH . 
E 5 HOH A 146 946 159 HOH HOH . 
E 5 HOH A 147 947 7 HOH HOH . 
E 5 HOH A 148 948 28 HOH HOH . 
E 5 HOH A 149 949 79 HOH HOH . 
E 5 HOH A 150 950 184 HOH HOH . 
E 5 HOH A 151 951 103 HOH HOH . 
E 5 HOH A 152 952 193 HOH HOH . 
E 5 HOH A 153 953 178 HOH HOH . 
E 5 HOH A 154 954 52 HOH HOH . 
E 5 HOH A 155 955 45 HOH HOH . 
E 5 HOH A 156 956 128 HOH HOH . 
E 5 HOH A 157 957 34 HOH HOH . 
E 5 HOH A 158 958 185 HOH HOH . 
E 5 HOH A 159 959 69 HOH HOH . 
E 5 HOH A 160 960 88 HOH HOH . 
E 5 HOH A 161 961 60 HOH HOH . 
E 5 HOH A 162 962 149 HOH HOH . 
E 5 HOH A 163 963 77 HOH HOH . 
E 5 HOH A 164 964 173 HOH HOH . 
E 5 HOH A 165 965 144 HOH HOH . 
E 5 HOH A 166 966 82 HOH HOH . 
E 5 HOH A 167 967 176 HOH HOH . 
E 5 HOH A 168 968 111 HOH HOH . 
E 5 HOH A 169 969 158 HOH HOH . 
E 5 HOH A 170 970 108 HOH HOH . 
E 5 HOH A 171 971 160 HOH HOH . 
E 5 HOH A 172 972 94 HOH HOH . 
E 5 HOH A 173 973 187 HOH HOH . 
E 5 HOH A 174 974 98 HOH HOH . 
E 5 HOH A 175 975 146 HOH HOH . 
E 5 HOH A 176 976 186 HOH HOH . 
E 5 HOH A 177 977 127 HOH HOH . 
E 5 HOH A 178 978 190 HOH HOH . 
E 5 HOH A 179 979 116 HOH HOH . 
E 5 HOH A 180 980 199 HOH HOH . 
E 5 HOH A 181 981 63 HOH HOH . 
E 5 HOH A 182 982 189 HOH HOH . 
E 5 HOH A 183 983 179 HOH HOH . 
E 5 HOH A 184 984 198 HOH HOH . 
E 5 HOH A 185 985 24 HOH HOH . 
E 5 HOH A 186 986 197 HOH HOH . 
E 5 HOH A 187 987 67 HOH HOH . 
E 5 HOH A 188 988 196 HOH HOH . 
E 5 HOH A 189 989 85 HOH HOH . 
E 5 HOH A 190 990 50 HOH HOH . 
E 5 HOH A 191 991 48 HOH HOH . 
F 5 HOH D 1 401 10 HOH HOH . 
F 5 HOH D 2 402 32 HOH HOH . 
F 5 HOH D 3 403 117 HOH HOH . 
F 5 HOH D 4 404 96 HOH HOH . 
F 5 HOH D 5 405 70 HOH HOH . 
F 5 HOH D 6 406 130 HOH HOH . 
F 5 HOH D 7 407 151 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 11.791 22.499 31.908 1 53.85 ? C1 GOL 702 A 1 
HETATM 2 O O1 GOL . . . D 4 10.567 21.846 32.313 1 51.01 ? O1 GOL 702 A 1 
HETATM 3 C C2 GOL . . . D 4 12.786 21.69 31.021 1 53.94 ? C2 GOL 702 A 1 
HETATM 4 O O2 GOL . . . D 4 12.197 20.515 30.528 1 53.7 ? O2 GOL 702 A 1 
HETATM 5 C C3 GOL . . . D 4 14.169 21.408 31.677 1 54.58 ? C3 GOL 702 A 1 
HETATM 6 O O3 GOL . . . D 4 14.882 20.326 31.047 1 55.18 ? O3 GOL 702 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#