data_5C2O # _model_server_result.job_id L1Ngrb3VmXtPHFBHdLVHcg _model_server_result.datetime_utc '2025-01-18 10:38:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 5C2O # _exptl.entry_id 5C2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C2O _cell.length_a 112.455 _cell.length_b 112.455 _cell.length_c 112.455 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 58 A CYS 24 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc2 A SG CYS 88 A CYS 54 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc3 A SG CYS 100 A CYS 66 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc4 A ND1 HIS 105 A HIS 71 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc5 A SG CYS 133 A CYS 99 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc6 A SG CYS 136 A CYS 102 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc7 D ZN ZN . A ZN 702 1_555 K O HOH . A HOH 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc8 E MG MG . A MG 703 1_555 F O1A TTP . A TTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc9 E MG MG . A MG 703 1_555 F O1B TTP . A TTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc10 E MG MG . A MG 703 1_555 F O3G TTP . A TTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc11 E MG MG . A MG 703 1_555 K O HOH . A HOH 827 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc12 E MG MG . A MG 703 1_555 K O HOH . A HOH 831 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc13 E MG MG . A MG 703 1_555 K O HOH . A HOH 848 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc14 B SG CYS 58 B CYS 24 1_555 G ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc15 B SG CYS 88 B CYS 54 1_555 G ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc16 B ND1 HIS 93 B HIS 59 1_555 G ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc17 B SG CYS 100 B CYS 66 1_555 G ZN ZN . B ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc18 B ND1 HIS 105 B HIS 71 1_555 H ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc19 B SG CYS 133 B CYS 99 1_555 H ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc20 B SG CYS 136 B CYS 102 1_555 H ZN ZN . B ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc21 H ZN ZN . B ZN 702 1_555 L O HOH . B HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc22 I MG MG . B MG 703 1_555 J O1A TTP . B TTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc23 I MG MG . B MG 703 1_555 J O1B TTP . B TTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc24 I MG MG . B MG 703 1_555 J O3G TTP . B TTP 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc25 I MG MG . B MG 703 1_555 L O HOH . B HOH 822 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc26 I MG MG . B MG 703 1_555 L O HOH . B HOH 826 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc27 I MG MG . B MG 703 1_555 L O HOH . B HOH 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5C2O _atom_sites.fract_transf_matrix[1][1] 0.008892 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 701 701 ZN ZN . D 2 ZN A 1 702 702 ZN ZN . E 3 MG A 1 703 703 MG MG . F 4 TTP A 1 704 1 TTP TTP . G 2 ZN B 1 701 701 ZN ZN . H 2 ZN B 1 702 702 ZN ZN . I 3 MG B 1 703 703 MG MG . J 4 TTP B 1 704 1 TTP TTP . K 5 HOH A 1 801 34 HOH HOH . K 5 HOH A 2 802 25 HOH HOH . K 5 HOH A 3 803 59 HOH HOH . K 5 HOH A 4 804 89 HOH HOH . K 5 HOH A 5 805 9 HOH HOH . K 5 HOH A 6 806 10 HOH HOH . K 5 HOH A 7 807 97 HOH HOH . K 5 HOH A 8 808 87 HOH HOH . K 5 HOH A 9 809 60 HOH HOH . K 5 HOH A 10 810 5 HOH HOH . K 5 HOH A 11 811 65 HOH HOH . K 5 HOH A 12 812 29 HOH HOH . K 5 HOH A 13 813 45 HOH HOH . K 5 HOH A 14 814 7 HOH HOH . K 5 HOH A 15 815 38 HOH HOH . K 5 HOH A 16 816 8 HOH HOH . K 5 HOH A 17 817 72 HOH HOH . K 5 HOH A 18 818 26 HOH HOH . K 5 HOH A 19 819 50 HOH HOH . K 5 HOH A 20 820 44 HOH HOH . K 5 HOH A 21 821 51 HOH HOH . K 5 HOH A 22 822 83 HOH HOH . K 5 HOH A 23 823 2 HOH HOH . K 5 HOH A 24 824 18 HOH HOH . K 5 HOH A 25 825 11 HOH HOH . K 5 HOH A 26 826 15 HOH HOH . K 5 HOH A 27 827 20 HOH HOH . K 5 HOH A 28 828 28 HOH HOH . K 5 HOH A 29 829 95 HOH HOH . K 5 HOH A 30 830 23 HOH HOH . K 5 HOH A 31 831 27 HOH HOH . K 5 HOH A 32 832 55 HOH HOH . K 5 HOH A 33 833 37 HOH HOH . K 5 HOH A 34 834 46 HOH HOH . K 5 HOH A 35 835 98 HOH HOH . K 5 HOH A 36 836 84 HOH HOH . K 5 HOH A 37 837 43 HOH HOH . K 5 HOH A 38 838 85 HOH HOH . K 5 HOH A 39 839 48 HOH HOH . K 5 HOH A 40 840 40 HOH HOH . K 5 HOH A 41 841 6 HOH HOH . K 5 HOH A 42 842 1 HOH HOH . K 5 HOH A 43 843 53 HOH HOH . K 5 HOH A 44 844 80 HOH HOH . K 5 HOH A 45 845 77 HOH HOH . K 5 HOH A 46 846 88 HOH HOH . K 5 HOH A 47 847 4 HOH HOH . K 5 HOH A 48 848 94 HOH HOH . K 5 HOH A 49 849 78 HOH HOH . K 5 HOH A 50 850 39 HOH HOH . K 5 HOH A 51 851 52 HOH HOH . L 5 HOH B 1 801 62 HOH HOH . L 5 HOH B 2 802 17 HOH HOH . L 5 HOH B 3 803 42 HOH HOH . L 5 HOH B 4 804 64 HOH HOH . L 5 HOH B 5 805 56 HOH HOH . L 5 HOH B 6 806 47 HOH HOH . L 5 HOH B 7 807 14 HOH HOH . L 5 HOH B 8 808 69 HOH HOH . L 5 HOH B 9 809 3 HOH HOH . L 5 HOH B 10 810 19 HOH HOH . L 5 HOH B 11 811 24 HOH HOH . L 5 HOH B 12 812 58 HOH HOH . L 5 HOH B 13 813 36 HOH HOH . L 5 HOH B 14 814 81 HOH HOH . L 5 HOH B 15 815 31 HOH HOH . L 5 HOH B 16 816 33 HOH HOH . L 5 HOH B 17 817 75 HOH HOH . L 5 HOH B 18 818 13 HOH HOH . L 5 HOH B 19 819 35 HOH HOH . L 5 HOH B 20 820 66 HOH HOH . L 5 HOH B 21 821 93 HOH HOH . L 5 HOH B 22 822 16 HOH HOH . L 5 HOH B 23 823 12 HOH HOH . L 5 HOH B 24 824 68 HOH HOH . L 5 HOH B 25 825 21 HOH HOH . L 5 HOH B 26 826 41 HOH HOH . L 5 HOH B 27 827 54 HOH HOH . L 5 HOH B 28 828 49 HOH HOH . L 5 HOH B 29 829 73 HOH HOH . L 5 HOH B 30 830 99 HOH HOH . L 5 HOH B 31 831 96 HOH HOH . L 5 HOH B 32 832 92 HOH HOH . L 5 HOH B 33 833 61 HOH HOH . L 5 HOH B 34 834 30 HOH HOH . L 5 HOH B 35 835 32 HOH HOH . L 5 HOH B 36 836 22 HOH HOH . L 5 HOH B 37 837 57 HOH HOH . L 5 HOH B 38 838 100 HOH HOH . L 5 HOH B 39 839 82 HOH HOH . L 5 HOH B 40 840 76 HOH HOH . L 5 HOH B 41 841 63 HOH HOH . L 5 HOH B 42 842 70 HOH HOH . L 5 HOH B 43 843 91 HOH HOH . L 5 HOH B 44 844 90 HOH HOH . L 5 HOH B 45 845 74 HOH HOH . L 5 HOH B 46 846 79 HOH HOH . L 5 HOH B 47 847 67 HOH HOH . L 5 HOH B 48 848 86 HOH HOH . L 5 HOH B 49 849 101 HOH HOH . L 5 HOH B 50 850 71 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 76.264 _atom_site.Cartn_y 72.66 _atom_site.Cartn_z 39.832 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 68.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #