data_5C36 # _model_server_result.job_id QZ8B9gms0Z_HA8G0QgXy_g _model_server_result.datetime_utc '2024-11-22 23:14:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5C36 # _exptl.entry_id 5C36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C36 _cell.length_a 52.55 _cell.length_b 149.07 _cell.length_c 79.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -39.815 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 154 A ASP 211 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc2 A OD1 ASP 156 A ASP 213 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 B MN MN . A MN 401 1_555 D O1B UDP . A UDP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc4 B MN MN . A MN 401 1_555 D O1A UDP . A UDP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc5 B MN MN . A MN 401 1_555 E O HOH . A HOH 694 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5C36 _atom_sites.fract_transf_matrix[1][1] 0.019029 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006708 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012558 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 401 3 MN MN . C 3 DA8 A 1 402 1 DA8 DAA . D 4 UDP A 1 403 1 UDP UDP . E 5 HOH A 1 501 163 HOH HOH . E 5 HOH A 2 502 231 HOH HOH . E 5 HOH A 3 503 54 HOH HOH . E 5 HOH A 4 504 179 HOH HOH . E 5 HOH A 5 505 229 HOH HOH . E 5 HOH A 6 506 152 HOH HOH . E 5 HOH A 7 507 149 HOH HOH . E 5 HOH A 8 508 198 HOH HOH . E 5 HOH A 9 509 55 HOH HOH . E 5 HOH A 10 510 18 HOH HOH . E 5 HOH A 11 511 128 HOH HOH . E 5 HOH A 12 512 61 HOH HOH . E 5 HOH A 13 513 190 HOH HOH . E 5 HOH A 14 514 162 HOH HOH . E 5 HOH A 15 515 97 HOH HOH . E 5 HOH A 16 516 30 HOH HOH . E 5 HOH A 17 517 102 HOH HOH . E 5 HOH A 18 518 227 HOH HOH . E 5 HOH A 19 519 180 HOH HOH . E 5 HOH A 20 520 111 HOH HOH . E 5 HOH A 21 521 176 HOH HOH . E 5 HOH A 22 522 142 HOH HOH . E 5 HOH A 23 523 25 HOH HOH . E 5 HOH A 24 524 212 HOH HOH . E 5 HOH A 25 525 210 HOH HOH . E 5 HOH A 26 526 175 HOH HOH . E 5 HOH A 27 527 203 HOH HOH . E 5 HOH A 28 528 121 HOH HOH . E 5 HOH A 29 529 201 HOH HOH . E 5 HOH A 30 530 213 HOH HOH . E 5 HOH A 31 531 82 HOH HOH . E 5 HOH A 32 532 193 HOH HOH . E 5 HOH A 33 533 34 HOH HOH . E 5 HOH A 34 534 103 HOH HOH . E 5 HOH A 35 535 24 HOH HOH . E 5 HOH A 36 536 118 HOH HOH . E 5 HOH A 37 537 90 HOH HOH . E 5 HOH A 38 538 204 HOH HOH . E 5 HOH A 39 539 68 HOH HOH . E 5 HOH A 40 540 135 HOH HOH . E 5 HOH A 41 541 134 HOH HOH . E 5 HOH A 42 542 197 HOH HOH . E 5 HOH A 43 543 40 HOH HOH . E 5 HOH A 44 544 75 HOH HOH . E 5 HOH A 45 545 36 HOH HOH . E 5 HOH A 46 546 141 HOH HOH . E 5 HOH A 47 547 187 HOH HOH . E 5 HOH A 48 548 157 HOH HOH . E 5 HOH A 49 549 122 HOH HOH . E 5 HOH A 50 550 183 HOH HOH . E 5 HOH A 51 551 7 HOH HOH . E 5 HOH A 52 552 74 HOH HOH . E 5 HOH A 53 553 10 HOH HOH . E 5 HOH A 54 554 196 HOH HOH . E 5 HOH A 55 555 26 HOH HOH . E 5 HOH A 56 556 15 HOH HOH . E 5 HOH A 57 557 208 HOH HOH . E 5 HOH A 58 558 104 HOH HOH . E 5 HOH A 59 559 22 HOH HOH . E 5 HOH A 60 560 6 HOH HOH . E 5 HOH A 61 561 65 HOH HOH . E 5 HOH A 62 562 216 HOH HOH . E 5 HOH A 63 563 23 HOH HOH . E 5 HOH A 64 564 154 HOH HOH . E 5 HOH A 65 565 112 HOH HOH . E 5 HOH A 66 566 130 HOH HOH . E 5 HOH A 67 567 160 HOH HOH . E 5 HOH A 68 568 37 HOH HOH . E 5 HOH A 69 569 107 HOH HOH . E 5 HOH A 70 570 120 HOH HOH . E 5 HOH A 71 571 195 HOH HOH . E 5 HOH A 72 572 158 HOH HOH . E 5 HOH A 73 573 100 HOH HOH . E 5 HOH A 74 574 173 HOH HOH . E 5 HOH A 75 575 178 HOH HOH . E 5 HOH A 76 576 12 HOH HOH . E 5 HOH A 77 577 51 HOH HOH . E 5 HOH A 78 578 219 HOH HOH . E 5 HOH A 79 579 59 HOH HOH . E 5 HOH A 80 580 109 HOH HOH . E 5 HOH A 81 581 132 HOH HOH . E 5 HOH A 82 582 88 HOH HOH . E 5 HOH A 83 583 137 HOH HOH . E 5 HOH A 84 584 58 HOH HOH . E 5 HOH A 85 585 177 HOH HOH . E 5 HOH A 86 586 39 HOH HOH . E 5 HOH A 87 587 17 HOH HOH . E 5 HOH A 88 588 27 HOH HOH . E 5 HOH A 89 589 126 HOH HOH . E 5 HOH A 90 590 101 HOH HOH . E 5 HOH A 91 591 9 HOH HOH . E 5 HOH A 92 592 43 HOH HOH . E 5 HOH A 93 593 84 HOH HOH . E 5 HOH A 94 594 50 HOH HOH . E 5 HOH A 95 595 44 HOH HOH . E 5 HOH A 96 596 16 HOH HOH . E 5 HOH A 97 597 60 HOH HOH . E 5 HOH A 98 598 41 HOH HOH . E 5 HOH A 99 599 45 HOH HOH . E 5 HOH A 100 600 3 HOH HOH . E 5 HOH A 101 601 123 HOH HOH . E 5 HOH A 102 602 5 HOH HOH . E 5 HOH A 103 603 205 HOH HOH . E 5 HOH A 104 604 72 HOH HOH . E 5 HOH A 105 605 110 HOH HOH . E 5 HOH A 106 606 4 HOH HOH . E 5 HOH A 107 607 33 HOH HOH . E 5 HOH A 108 608 21 HOH HOH . E 5 HOH A 109 609 95 HOH HOH . E 5 HOH A 110 610 215 HOH HOH . E 5 HOH A 111 611 151 HOH HOH . E 5 HOH A 112 612 13 HOH HOH . E 5 HOH A 113 613 228 HOH HOH . E 5 HOH A 114 614 19 HOH HOH . E 5 HOH A 115 615 70 HOH HOH . E 5 HOH A 116 616 53 HOH HOH . E 5 HOH A 117 617 93 HOH HOH . E 5 HOH A 118 618 114 HOH HOH . E 5 HOH A 119 619 35 HOH HOH . E 5 HOH A 120 620 202 HOH HOH . E 5 HOH A 121 621 32 HOH HOH . E 5 HOH A 122 622 221 HOH HOH . E 5 HOH A 123 623 182 HOH HOH . E 5 HOH A 124 624 124 HOH HOH . E 5 HOH A 125 625 47 HOH HOH . E 5 HOH A 126 626 117 HOH HOH . E 5 HOH A 127 627 2 HOH HOH . E 5 HOH A 128 628 87 HOH HOH . E 5 HOH A 129 629 185 HOH HOH . E 5 HOH A 130 630 125 HOH HOH . E 5 HOH A 131 631 76 HOH HOH . E 5 HOH A 132 632 66 HOH HOH . E 5 HOH A 133 633 89 HOH HOH . E 5 HOH A 134 634 148 HOH HOH . E 5 HOH A 135 635 106 HOH HOH . E 5 HOH A 136 636 92 HOH HOH . E 5 HOH A 137 637 192 HOH HOH . E 5 HOH A 138 638 69 HOH HOH . E 5 HOH A 139 639 108 HOH HOH . E 5 HOH A 140 640 77 HOH HOH . E 5 HOH A 141 641 8 HOH HOH . E 5 HOH A 142 642 83 HOH HOH . E 5 HOH A 143 643 20 HOH HOH . E 5 HOH A 144 644 73 HOH HOH . E 5 HOH A 145 645 119 HOH HOH . E 5 HOH A 146 646 63 HOH HOH . E 5 HOH A 147 647 62 HOH HOH . E 5 HOH A 148 648 94 HOH HOH . E 5 HOH A 149 649 96 HOH HOH . E 5 HOH A 150 650 28 HOH HOH . E 5 HOH A 151 651 186 HOH HOH . E 5 HOH A 152 652 11 HOH HOH . E 5 HOH A 153 653 131 HOH HOH . E 5 HOH A 154 654 164 HOH HOH . E 5 HOH A 155 655 78 HOH HOH . E 5 HOH A 156 656 1 HOH HOH . E 5 HOH A 157 657 14 HOH HOH . E 5 HOH A 158 658 218 HOH HOH . E 5 HOH A 159 659 105 HOH HOH . E 5 HOH A 160 660 46 HOH HOH . E 5 HOH A 161 661 174 HOH HOH . E 5 HOH A 162 662 217 HOH HOH . E 5 HOH A 163 663 159 HOH HOH . E 5 HOH A 164 664 79 HOH HOH . E 5 HOH A 165 665 49 HOH HOH . E 5 HOH A 166 666 129 HOH HOH . E 5 HOH A 167 667 80 HOH HOH . E 5 HOH A 168 668 52 HOH HOH . E 5 HOH A 169 669 144 HOH HOH . E 5 HOH A 170 670 56 HOH HOH . E 5 HOH A 171 671 71 HOH HOH . E 5 HOH A 172 672 211 HOH HOH . E 5 HOH A 173 673 98 HOH HOH . E 5 HOH A 174 674 91 HOH HOH . E 5 HOH A 175 675 116 HOH HOH . E 5 HOH A 176 676 220 HOH HOH . E 5 HOH A 177 677 206 HOH HOH . E 5 HOH A 178 678 115 HOH HOH . E 5 HOH A 179 679 139 HOH HOH . E 5 HOH A 180 680 165 HOH HOH . E 5 HOH A 181 681 57 HOH HOH . E 5 HOH A 182 682 200 HOH HOH . E 5 HOH A 183 683 222 HOH HOH . E 5 HOH A 184 684 138 HOH HOH . E 5 HOH A 185 685 38 HOH HOH . E 5 HOH A 186 686 64 HOH HOH . E 5 HOH A 187 687 133 HOH HOH . E 5 HOH A 188 688 171 HOH HOH . E 5 HOH A 189 689 143 HOH HOH . E 5 HOH A 190 690 146 HOH HOH . E 5 HOH A 191 691 199 HOH HOH . E 5 HOH A 192 692 172 HOH HOH . E 5 HOH A 193 693 194 HOH HOH . E 5 HOH A 194 694 225 HOH HOH . E 5 HOH A 195 695 113 HOH HOH . E 5 HOH A 196 696 31 HOH HOH . E 5 HOH A 197 697 167 HOH HOH . E 5 HOH A 198 698 86 HOH HOH . E 5 HOH A 199 699 147 HOH HOH . E 5 HOH A 200 700 140 HOH HOH . E 5 HOH A 201 701 169 HOH HOH . E 5 HOH A 202 702 209 HOH HOH . E 5 HOH A 203 703 191 HOH HOH . E 5 HOH A 204 704 226 HOH HOH . E 5 HOH A 205 705 42 HOH HOH . E 5 HOH A 206 706 184 HOH HOH . E 5 HOH A 207 707 166 HOH HOH . E 5 HOH A 208 708 189 HOH HOH . E 5 HOH A 209 709 188 HOH HOH . E 5 HOH A 210 710 230 HOH HOH . E 5 HOH A 211 711 145 HOH HOH . E 5 HOH A 212 712 150 HOH HOH . E 5 HOH A 213 713 48 HOH HOH . E 5 HOH A 214 714 136 HOH HOH . E 5 HOH A 215 715 153 HOH HOH . E 5 HOH A 216 716 67 HOH HOH . E 5 HOH A 217 717 170 HOH HOH . E 5 HOH A 218 718 156 HOH HOH . E 5 HOH A 219 719 29 HOH HOH . E 5 HOH A 220 720 214 HOH HOH . E 5 HOH A 221 721 81 HOH HOH . E 5 HOH A 222 722 223 HOH HOH . E 5 HOH A 223 723 127 HOH HOH . E 5 HOH A 224 724 155 HOH HOH . E 5 HOH A 225 725 207 HOH HOH . E 5 HOH A 226 726 161 HOH HOH . E 5 HOH A 227 727 85 HOH HOH . E 5 HOH A 228 728 181 HOH HOH . E 5 HOH A 229 729 224 HOH HOH . E 5 HOH A 230 730 168 HOH HOH . E 5 HOH A 231 731 99 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.846 _atom_site.Cartn_y 16.77 _atom_site.Cartn_z 3.962 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 1 #