data_5C3A # _model_server_result.job_id v1Bdi8lj5B2pYUpYEOCvbQ _model_server_result.datetime_utc '2024-11-13 02:55:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c3a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5C3A # _exptl.entry_id 5C3A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C3A _cell.length_a 52.66 _cell.length_b 149.86 _cell.length_c 79.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C3A _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.66 0 39.685 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 154 A ASP 211 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc2 A OD1 ASP 156 A ASP 213 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc3 A OD2 ASP 156 A ASP 213 1_555 B MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc4 B MN MN . A MN 401 1_555 C O10 URM . A URM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc5 B MN MN . A MN 401 1_555 C O24 URM . A URM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc6 B MN MN . A MN 401 1_555 D O HOH . A HOH 672 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5C3A _atom_sites.fract_transf_matrix[1][1] 0.01899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006673 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 401 401 MN MN . C 3 URM A 1 402 1 URM URM . D 4 HOH A 1 501 186 HOH HOH . D 4 HOH A 2 502 159 HOH HOH . D 4 HOH A 3 503 222 HOH HOH . D 4 HOH A 4 504 157 HOH HOH . D 4 HOH A 5 505 154 HOH HOH . D 4 HOH A 6 506 40 HOH HOH . D 4 HOH A 7 507 188 HOH HOH . D 4 HOH A 8 508 169 HOH HOH . D 4 HOH A 9 509 207 HOH HOH . D 4 HOH A 10 510 193 HOH HOH . D 4 HOH A 11 511 81 HOH HOH . D 4 HOH A 12 512 148 HOH HOH . D 4 HOH A 13 513 85 HOH HOH . D 4 HOH A 14 514 142 HOH HOH . D 4 HOH A 15 515 212 HOH HOH . D 4 HOH A 16 516 84 HOH HOH . D 4 HOH A 17 517 83 HOH HOH . D 4 HOH A 18 518 153 HOH HOH . D 4 HOH A 19 519 78 HOH HOH . D 4 HOH A 20 520 97 HOH HOH . D 4 HOH A 21 521 34 HOH HOH . D 4 HOH A 22 522 106 HOH HOH . D 4 HOH A 23 523 10 HOH HOH . D 4 HOH A 24 524 69 HOH HOH . D 4 HOH A 25 525 115 HOH HOH . D 4 HOH A 26 526 19 HOH HOH . D 4 HOH A 27 527 195 HOH HOH . D 4 HOH A 28 528 59 HOH HOH . D 4 HOH A 29 529 171 HOH HOH . D 4 HOH A 30 530 90 HOH HOH . D 4 HOH A 31 531 8 HOH HOH . D 4 HOH A 32 532 3 HOH HOH . D 4 HOH A 33 533 204 HOH HOH . D 4 HOH A 34 534 30 HOH HOH . D 4 HOH A 35 535 94 HOH HOH . D 4 HOH A 36 536 208 HOH HOH . D 4 HOH A 37 537 194 HOH HOH . D 4 HOH A 38 538 129 HOH HOH . D 4 HOH A 39 539 62 HOH HOH . D 4 HOH A 40 540 177 HOH HOH . D 4 HOH A 41 541 116 HOH HOH . D 4 HOH A 42 542 48 HOH HOH . D 4 HOH A 43 543 136 HOH HOH . D 4 HOH A 44 544 107 HOH HOH . D 4 HOH A 45 545 41 HOH HOH . D 4 HOH A 46 546 11 HOH HOH . D 4 HOH A 47 547 174 HOH HOH . D 4 HOH A 48 548 45 HOH HOH . D 4 HOH A 49 549 63 HOH HOH . D 4 HOH A 50 550 18 HOH HOH . D 4 HOH A 51 551 50 HOH HOH . D 4 HOH A 52 552 133 HOH HOH . D 4 HOH A 53 553 141 HOH HOH . D 4 HOH A 54 554 57 HOH HOH . D 4 HOH A 55 555 104 HOH HOH . D 4 HOH A 56 556 36 HOH HOH . D 4 HOH A 57 557 191 HOH HOH . D 4 HOH A 58 558 75 HOH HOH . D 4 HOH A 59 559 1 HOH HOH . D 4 HOH A 60 560 70 HOH HOH . D 4 HOH A 61 561 52 HOH HOH . D 4 HOH A 62 562 42 HOH HOH . D 4 HOH A 63 563 58 HOH HOH . D 4 HOH A 64 564 175 HOH HOH . D 4 HOH A 65 565 91 HOH HOH . D 4 HOH A 66 566 7 HOH HOH . D 4 HOH A 67 567 39 HOH HOH . D 4 HOH A 68 568 32 HOH HOH . D 4 HOH A 69 569 74 HOH HOH . D 4 HOH A 70 570 173 HOH HOH . D 4 HOH A 71 571 117 HOH HOH . D 4 HOH A 72 572 9 HOH HOH . D 4 HOH A 73 573 56 HOH HOH . D 4 HOH A 74 574 73 HOH HOH . D 4 HOH A 75 575 121 HOH HOH . D 4 HOH A 76 576 12 HOH HOH . D 4 HOH A 77 577 218 HOH HOH . D 4 HOH A 78 578 44 HOH HOH . D 4 HOH A 79 579 128 HOH HOH . D 4 HOH A 80 580 215 HOH HOH . D 4 HOH A 81 581 170 HOH HOH . D 4 HOH A 82 582 123 HOH HOH . D 4 HOH A 83 583 138 HOH HOH . D 4 HOH A 84 584 111 HOH HOH . D 4 HOH A 85 585 5 HOH HOH . D 4 HOH A 86 586 182 HOH HOH . D 4 HOH A 87 587 13 HOH HOH . D 4 HOH A 88 588 87 HOH HOH . D 4 HOH A 89 589 221 HOH HOH . D 4 HOH A 90 590 27 HOH HOH . D 4 HOH A 91 591 28 HOH HOH . D 4 HOH A 92 592 72 HOH HOH . D 4 HOH A 93 593 25 HOH HOH . D 4 HOH A 94 594 6 HOH HOH . D 4 HOH A 95 595 17 HOH HOH . D 4 HOH A 96 596 161 HOH HOH . D 4 HOH A 97 597 77 HOH HOH . D 4 HOH A 98 598 211 HOH HOH . D 4 HOH A 99 599 23 HOH HOH . D 4 HOH A 100 600 214 HOH HOH . D 4 HOH A 101 601 156 HOH HOH . D 4 HOH A 102 602 119 HOH HOH . D 4 HOH A 103 603 35 HOH HOH . D 4 HOH A 104 604 79 HOH HOH . D 4 HOH A 105 605 29 HOH HOH . D 4 HOH A 106 606 66 HOH HOH . D 4 HOH A 107 607 14 HOH HOH . D 4 HOH A 108 608 143 HOH HOH . D 4 HOH A 109 609 217 HOH HOH . D 4 HOH A 110 610 102 HOH HOH . D 4 HOH A 111 611 86 HOH HOH . D 4 HOH A 112 612 144 HOH HOH . D 4 HOH A 113 613 15 HOH HOH . D 4 HOH A 114 614 2 HOH HOH . D 4 HOH A 115 615 150 HOH HOH . D 4 HOH A 116 616 54 HOH HOH . D 4 HOH A 117 617 196 HOH HOH . D 4 HOH A 118 618 26 HOH HOH . D 4 HOH A 119 619 99 HOH HOH . D 4 HOH A 120 620 112 HOH HOH . D 4 HOH A 121 621 68 HOH HOH . D 4 HOH A 122 622 101 HOH HOH . D 4 HOH A 123 623 82 HOH HOH . D 4 HOH A 124 624 46 HOH HOH . D 4 HOH A 125 625 168 HOH HOH . D 4 HOH A 126 626 61 HOH HOH . D 4 HOH A 127 627 80 HOH HOH . D 4 HOH A 128 628 103 HOH HOH . D 4 HOH A 129 629 96 HOH HOH . D 4 HOH A 130 630 176 HOH HOH . D 4 HOH A 131 631 109 HOH HOH . D 4 HOH A 132 632 120 HOH HOH . D 4 HOH A 133 633 60 HOH HOH . D 4 HOH A 134 634 135 HOH HOH . D 4 HOH A 135 635 92 HOH HOH . D 4 HOH A 136 636 166 HOH HOH . D 4 HOH A 137 637 205 HOH HOH . D 4 HOH A 138 638 122 HOH HOH . D 4 HOH A 139 639 219 HOH HOH . D 4 HOH A 140 640 20 HOH HOH . D 4 HOH A 141 641 16 HOH HOH . D 4 HOH A 142 642 216 HOH HOH . D 4 HOH A 143 643 65 HOH HOH . D 4 HOH A 144 644 89 HOH HOH . D 4 HOH A 145 645 131 HOH HOH . D 4 HOH A 146 646 125 HOH HOH . D 4 HOH A 147 647 105 HOH HOH . D 4 HOH A 148 648 49 HOH HOH . D 4 HOH A 149 649 24 HOH HOH . D 4 HOH A 150 650 22 HOH HOH . D 4 HOH A 151 651 149 HOH HOH . D 4 HOH A 152 652 108 HOH HOH . D 4 HOH A 153 653 55 HOH HOH . D 4 HOH A 154 654 124 HOH HOH . D 4 HOH A 155 655 113 HOH HOH . D 4 HOH A 156 656 4 HOH HOH . D 4 HOH A 157 657 192 HOH HOH . D 4 HOH A 158 658 185 HOH HOH . D 4 HOH A 159 659 47 HOH HOH . D 4 HOH A 160 660 114 HOH HOH . D 4 HOH A 161 661 145 HOH HOH . D 4 HOH A 162 662 33 HOH HOH . D 4 HOH A 163 663 163 HOH HOH . D 4 HOH A 164 664 213 HOH HOH . D 4 HOH A 165 665 146 HOH HOH . D 4 HOH A 166 666 37 HOH HOH . D 4 HOH A 167 667 179 HOH HOH . D 4 HOH A 168 668 137 HOH HOH . D 4 HOH A 169 669 71 HOH HOH . D 4 HOH A 170 670 197 HOH HOH . D 4 HOH A 171 671 100 HOH HOH . D 4 HOH A 172 672 152 HOH HOH . D 4 HOH A 173 673 165 HOH HOH . D 4 HOH A 174 674 151 HOH HOH . D 4 HOH A 175 675 38 HOH HOH . D 4 HOH A 176 676 53 HOH HOH . D 4 HOH A 177 677 88 HOH HOH . D 4 HOH A 178 678 162 HOH HOH . D 4 HOH A 179 679 206 HOH HOH . D 4 HOH A 180 680 178 HOH HOH . D 4 HOH A 181 681 95 HOH HOH . D 4 HOH A 182 682 167 HOH HOH . D 4 HOH A 183 683 31 HOH HOH . D 4 HOH A 184 684 67 HOH HOH . D 4 HOH A 185 685 140 HOH HOH . D 4 HOH A 186 686 164 HOH HOH . D 4 HOH A 187 687 201 HOH HOH . D 4 HOH A 188 688 220 HOH HOH . D 4 HOH A 189 689 180 HOH HOH . D 4 HOH A 190 690 181 HOH HOH . D 4 HOH A 191 691 76 HOH HOH . D 4 HOH A 192 692 223 HOH HOH . D 4 HOH A 193 693 51 HOH HOH . D 4 HOH A 194 694 110 HOH HOH . D 4 HOH A 195 695 183 HOH HOH . D 4 HOH A 196 696 64 HOH HOH . D 4 HOH A 197 697 184 HOH HOH . D 4 HOH A 198 698 147 HOH HOH . D 4 HOH A 199 699 139 HOH HOH . D 4 HOH A 200 700 134 HOH HOH . D 4 HOH A 201 701 21 HOH HOH . D 4 HOH A 202 702 160 HOH HOH . D 4 HOH A 203 703 158 HOH HOH . D 4 HOH A 204 704 132 HOH HOH . D 4 HOH A 205 705 202 HOH HOH . D 4 HOH A 206 706 126 HOH HOH . D 4 HOH A 207 707 210 HOH HOH . D 4 HOH A 208 708 93 HOH HOH . D 4 HOH A 209 709 200 HOH HOH . D 4 HOH A 210 710 130 HOH HOH . D 4 HOH A 211 711 98 HOH HOH . D 4 HOH A 212 712 127 HOH HOH . D 4 HOH A 213 713 187 HOH HOH . D 4 HOH A 214 714 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 11.641 _atom_site.Cartn_y 16.962 _atom_site.Cartn_z -4.039 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #