data_5C4G # _model_server_result.job_id 1FLjZa0v2RZhwrIDv1vCPw _model_server_result.datetime_utc '2024-11-04 20:28:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c4g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":803}' # _entry.id 5C4G # _exptl.entry_id 5C4G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.387 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~-[7-(3,4-dimethoxyphenyl)quinoxalin-2-yl]-N-methylglycinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C4G _cell.length_a 48.82 _cell.length_b 105.4 _cell.length_c 188.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C4G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 28 B SER 25 1_555 C MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc2 C MG MG . B MG 301 1_555 D O3B GDP . B GDP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? # _chem_comp.formula 'C19 H20 N4 O3' _chem_comp.formula_weight 352.387 _chem_comp.id BQR _chem_comp.mon_nstd_flag . _chem_comp.name N~2~-[7-(3,4-dimethoxyphenyl)quinoxalin-2-yl]-N-methylglycinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAU CAV BQR sing 70 n n NAU C BQR sing 71 n n CA C BQR sing 72 n n CA N BQR sing 73 n n C O BQR doub 74 n n N CAQ BQR sing 75 n n CAQ NAP BQR doub 76 n y CAQ CAZ BQR sing 77 n y NAP CAO BQR sing 78 n y CAA OAC BQR sing 79 n n OAC CAE BQR sing 80 n n CAZ NAY BQR doub 81 n y CAO CAL BQR doub 82 n y CAO CAX BQR sing 83 n y CAL CAK BQR sing 84 n y CAG CAE BQR doub 85 n y CAG CAI BQR sing 86 n y CAE CAF BQR sing 87 n y NAY CAX BQR sing 88 n y CAX CAW BQR doub 89 n y CAK CAI BQR sing 90 n n CAK CAN BQR doub 91 n y CAI CAJ BQR doub 92 n y CAF OAD BQR sing 93 n n CAF CAH BQR doub 94 n y OAD CAB BQR sing 95 n n CAW CAN BQR sing 96 n y CAJ CAH BQR sing 97 n y N H BQR sing 98 n n CA H1 BQR sing 99 n n CA H2 BQR sing 100 n n CAA H3 BQR sing 101 n n CAA H4 BQR sing 102 n n CAA H5 BQR sing 103 n n CAB H6 BQR sing 104 n n CAB H7 BQR sing 105 n n CAB H8 BQR sing 106 n n CAG HAG BQR sing 107 n n CAH HAH BQR sing 108 n n CAJ HAJ BQR sing 109 n n CAL HAL BQR sing 110 n n CAN HAN BQR sing 111 n n CAV H9 BQR sing 112 n n CAV H10 BQR sing 113 n n CAV H11 BQR sing 114 n n CAW HAW BQR sing 115 n n CAZ HAZ BQR sing 116 n n NAU HAU BQR sing 117 n n # _atom_sites.entry_id 5C4G _atom_sites.fract_transf_matrix[1][1] 0.020483 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009488 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG B 1 301 301 MG MG . D 4 GDP B 1 302 302 GDP GDP . E 5 SO4 E 1 801 801 SO4 SO4 . F 5 SO4 E 1 802 802 SO4 SO4 . G 6 BQR E 1 803 803 BQR BQR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N BQR . . . G 6 -24.542 16.32 -41.134 1 72.3 ? N BQR 803 E 1 HETATM 2 C CA BQR . . . G 6 -23.883 15.737 -42.245 1 71.93 ? CA BQR 803 E 1 HETATM 3 C CAA BQR . . . G 6 -16.974 11.206 -39.039 1 69.01 ? CAA BQR 803 E 1 HETATM 4 C CAB BQR . . . G 6 -14.272 13.735 -35.597 1 80.11 ? CAB BQR 803 E 1 HETATM 5 C CAE BQR . . . G 6 -17.079 13.193 -37.781 1 73.84 ? CAE BQR 803 E 1 HETATM 6 C CAF BQR . . . G 6 -16.394 13.428 -36.6 1 76.21 ? CAF BQR 803 E 1 HETATM 7 C CAG BQR . . . G 6 -18.379 13.648 -37.932 1 72.98 ? CAG BQR 803 E 1 HETATM 8 C CAH BQR . . . G 6 -17.012 14.116 -35.568 1 71.14 ? CAH BQR 803 E 1 HETATM 9 C CAI BQR . . . G 6 -18.995 14.342 -36.903 1 72.49 ? CAI BQR 803 E 1 HETATM 10 C CAJ BQR . . . G 6 -18.315 14.571 -35.718 1 69.58 ? CAJ BQR 803 E 1 HETATM 11 C CAK BQR . . . G 6 -20.419 14.827 -37.067 1 72.19 ? CAK BQR 803 E 1 HETATM 12 C CAL BQR . . . G 6 -20.939 15.038 -38.337 1 72.92 ? CAL BQR 803 E 1 HETATM 13 C CAN BQR . . . G 6 -21.206 15.048 -35.945 1 69.1 ? CAN BQR 803 E 1 HETATM 14 C CAO BQR . . . G 6 -22.252 15.477 -38.47 1 74.2 ? CAO BQR 803 E 1 HETATM 15 C CAQ BQR . . . G 6 -24.034 16.111 -39.828 1 75.83 ? CAQ BQR 803 E 1 HETATM 16 C CAV BQR . . . G 6 -22.901 12.062 -42.758 1 77.23 ? CAV BQR 803 E 1 HETATM 17 C CAW BQR . . . G 6 -22.51 15.485 -36.089 1 69.83 ? CAW BQR 803 E 1 HETATM 18 C CAX BQR . . . G 6 -23.028 15.697 -37.349 1 70.32 ? CAX BQR 803 E 1 HETATM 19 C CAZ BQR . . . G 6 -24.836 16.34 -38.714 1 74.83 ? CAZ BQR 803 E 1 HETATM 20 C C BQR . . . G 6 -23.891 14.228 -42.142 1 70.79 ? C BQR 803 E 1 HETATM 21 O O BQR . . . G 6 -24.73 13.661 -41.468 1 67.47 ? O BQR 803 E 1 HETATM 22 N NAP BQR . . . G 6 -22.783 15.692 -39.664 1 78.02 ? NAP BQR 803 E 1 HETATM 23 N NAU BQR . . . G 6 -22.911 13.478 -42.841 1 72.78 ? NAU BQR 803 E 1 HETATM 24 N NAY BQR . . . G 6 -24.304 16.124 -37.486 1 70.92 ? NAY BQR 803 E 1 HETATM 25 O OAC BQR . . . G 6 -16.459 12.497 -38.833 1 69.19 ? OAC BQR 803 E 1 HETATM 26 O OAD BQR . . . G 6 -15.075 12.963 -36.454 1 80.82 ? OAD BQR 803 E 1 HETATM 27 H H BQR . . . G 6 -25.289 16.827 -41.259 1 89.16 ? H BQR 803 E 1 HETATM 28 H HAG BQR . . . G 6 -18.86 13.483 -38.765 1 89.97 ? HAG BQR 803 E 1 HETATM 29 H HAH BQR . . . G 6 -16.531 14.281 -34.735 1 87.77 ? HAH BQR 803 E 1 HETATM 30 H HAJ BQR . . . G 6 -18.75 15.056 -34.991 1 85.89 ? HAJ BQR 803 E 1 HETATM 31 H HAL BQR . . . G 6 -20.389 14.88 -39.128 1 89.9 ? HAL BQR 803 E 1 HETATM 32 H HAN BQR . . . G 6 -20.839 14.897 -35.054 1 85.32 ? HAN BQR 803 E 1 HETATM 33 H HAW BQR . . . G 6 -23.062 15.642 -35.3 1 86.2 ? HAW BQR 803 E 1 HETATM 34 H HAZ BQR . . . G 6 -25.757 16.649 -38.815 1 92.19 ? HAZ BQR 803 E 1 HETATM 35 H HAU BQR . . . G 6 -22.284 13.908 -43.345 1 89.73 ? HAU BQR 803 E 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #