data_5C4S # _model_server_result.job_id vk3NdcqEowDhnWVvEMcydg _model_server_result.datetime_utc '2024-11-22 14:22:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5C4S # _exptl.entry_id 5C4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 480.771 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-4-fluoro-1H-indazol-3-yl}-3-fluorobenzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5C4S _cell.length_a 108.45 _cell.length_b 108.45 _cell.length_c 106.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H10 Cl F5 N2 O3' _chem_comp.formula_weight 480.771 _chem_comp.id 4Y5 _chem_comp.mon_nstd_flag . _chem_comp.name '4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-4-fluoro-1H-indazol-3-yl}-3-fluorobenzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 4Y5 doub 1 n y C1 C 4Y5 sing 2 n y C2 C3 4Y5 sing 3 n y C C5 4Y5 doub 4 n y O C7 4Y5 doub 5 n n C3 C4 4Y5 doub 6 n y C3 N1 4Y5 sing 7 n y C5 C4 4Y5 sing 8 n y C5 F 4Y5 sing 9 n n CL C13 4Y5 sing 10 n n C7 N1 4Y5 sing 11 n n C7 C8 4Y5 sing 12 n n C4 C6 4Y5 sing 13 n y N1 N 4Y5 sing 14 n y C13 C8 4Y5 doub 15 n y C13 C12 4Y5 sing 16 n y C8 C9 4Y5 sing 17 n y F1 C14 4Y5 sing 18 n n C6 N 4Y5 doub 19 n y C6 C15 4Y5 sing 20 n n C12 C11 4Y5 doub 21 n y C9 C14 4Y5 sing 22 n n C9 C10 4Y5 doub 23 n y C14 F2 4Y5 sing 24 n n C14 F3 4Y5 sing 25 n n C11 C10 4Y5 sing 26 n y C15 C20 4Y5 doub 27 n y C15 C16 4Y5 sing 28 n y F4 C16 4Y5 sing 29 n n C20 C19 4Y5 sing 30 n y C16 C17 4Y5 doub 31 n y C19 C18 4Y5 doub 32 n y C17 C18 4Y5 sing 33 n y C18 C21 4Y5 sing 34 n n C21 O1 4Y5 doub 35 n n C21 O2 4Y5 sing 36 n n C1 H1 4Y5 sing 37 n n C2 H2 4Y5 sing 38 n n C11 H3 4Y5 sing 39 n n C12 H4 4Y5 sing 40 n n C17 H5 4Y5 sing 41 n n O2 H6 4Y5 sing 42 n n C19 H7 4Y5 sing 43 n n C20 H8 4Y5 sing 44 n n C H9 4Y5 sing 45 n n C10 H10 4Y5 sing 46 n n # _atom_sites.entry_id 5C4S _atom_sites.fract_transf_matrix[1][1] 0.009221 _atom_sites.fract_transf_matrix[1][2] 0.005324 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4Y5 A 1 601 1 4Y5 299 . C 3 GOL A 1 602 1 GOL GOL . D 3 GOL A 1 603 2 GOL GOL . E 4 HOH A 1 701 9 HOH HOH . E 4 HOH A 2 702 10 HOH HOH . E 4 HOH A 3 703 13 HOH HOH . E 4 HOH A 4 704 1 HOH HOH . E 4 HOH A 5 705 17 HOH HOH . E 4 HOH A 6 706 7 HOH HOH . E 4 HOH A 7 707 8 HOH HOH . E 4 HOH A 8 708 2 HOH HOH . E 4 HOH A 9 709 18 HOH HOH . E 4 HOH A 10 710 12 HOH HOH . E 4 HOH A 11 711 4 HOH HOH . E 4 HOH A 12 712 11 HOH HOH . E 4 HOH A 13 713 5 HOH HOH . E 4 HOH A 14 714 3 HOH HOH . E 4 HOH A 15 715 14 HOH HOH . E 4 HOH A 16 716 6 HOH HOH . E 4 HOH A 17 717 16 HOH HOH . E 4 HOH A 18 718 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4Y5 . . . B 2 -38.917 25.735 28.76 1 57.28 ? C1 4Y5 601 A 1 HETATM 2 C C2 4Y5 . . . B 2 -38.924 24.449 29.281 1 55.95 ? C2 4Y5 601 A 1 HETATM 3 C C3 4Y5 . . . B 2 -38.284 24.2 30.494 1 54.57 ? C3 4Y5 601 A 1 HETATM 4 C C4 4Y5 . . . B 2 -37.61 25.219 31.204 1 55.95 ? C4 4Y5 601 A 1 HETATM 5 C C5 4Y5 . . . B 2 -37.643 26.485 30.625 1 56.33 ? C5 4Y5 601 A 1 HETATM 6 C C6 4Y5 . . . B 2 -37.084 24.568 32.388 1 54.1 ? C6 4Y5 601 A 1 HETATM 7 C C7 4Y5 . . . B 2 -38.616 21.751 30.979 1 57.76 ? C7 4Y5 601 A 1 HETATM 8 C C11 4Y5 . . . B 2 -37.378 18.464 33.473 1 59.85 ? C11 4Y5 601 A 1 HETATM 9 C C12 4Y5 . . . B 2 -36.483 19.032 32.578 1 60.19 ? C12 4Y5 601 A 1 HETATM 10 F F4 4Y5 . . . B 2 -37.74 26.938 33.805 1 65.24 ? F4 4Y5 601 A 1 HETATM 11 C C16 4Y5 . . . B 2 -36.576 26.326 34.123 1 57.43 ? C16 4Y5 601 A 1 HETATM 12 C C17 4Y5 . . . B 2 -35.763 26.94 35.044 1 53.86 ? C17 4Y5 601 A 1 HETATM 13 C C18 4Y5 . . . B 2 -34.564 26.325 35.404 1 53.37 ? C18 4Y5 601 A 1 HETATM 14 C C21 4Y5 . . . B 2 -33.668 26.992 36.42 1 55.48 ? C21 4Y5 601 A 1 HETATM 15 O O2 4Y5 . . . B 2 -34.05 28.094 36.88 1 54.89 ? O2 4Y5 601 A 1 HETATM 16 O O1 4Y5 . . . B 2 -32.594 26.423 36.749 1 58.47 -1 O1 4Y5 601 A 1 HETATM 17 C C19 4Y5 . . . B 2 -34.229 25.093 34.828 1 49.62 ? C19 4Y5 601 A 1 HETATM 18 C C20 4Y5 . . . B 2 -35.069 24.495 33.9 1 48.61 ? C20 4Y5 601 A 1 HETATM 19 C C15 4Y5 . . . B 2 -36.264 25.119 33.505 1 52.32 ? C15 4Y5 601 A 1 HETATM 20 F F 4Y5 . . . B 2 -37.023 27.496 31.27 1 56.11 ? F 4Y5 601 A 1 HETATM 21 C C 4Y5 . . . B 2 -38.276 26.766 29.433 1 58.37 ? C 4Y5 601 A 1 HETATM 22 N N 4Y5 . . . B 2 -37.407 23.285 32.415 1 53.23 ? N 4Y5 601 A 1 HETATM 23 N N1 4Y5 . . . B 2 -38.148 23.047 31.252 1 57.52 ? N1 4Y5 601 A 1 HETATM 24 O O 4Y5 . . . B 2 -39.312 21.523 29.998 1 54.17 ? O 4Y5 601 A 1 HETATM 25 C C8 4Y5 . . . B 2 -38.184 20.622 31.889 1 58.39 ? C8 4Y5 601 A 1 HETATM 26 C C13 4Y5 . . . B 2 -36.889 20.114 31.804 1 60.2 ? C13 4Y5 601 A 1 HETATM 27 CL CL 4Y5 . . . B 2 -35.745 20.865 30.739 1 57.47 ? CL 4Y5 601 A 1 HETATM 28 C C10 4Y5 . . . B 2 -38.666 18.967 33.592 1 60.99 ? C10 4Y5 601 A 1 HETATM 29 C C9 4Y5 . . . B 2 -39.084 20.041 32.806 1 59.36 ? C9 4Y5 601 A 1 HETATM 30 C C14 4Y5 . . . B 2 -40.5 20.533 32.93 1 59.35 ? C14 4Y5 601 A 1 HETATM 31 F F1 4Y5 . . . B 2 -41.257 20.13 31.923 1 57.93 ? F1 4Y5 601 A 1 HETATM 32 F F2 4Y5 . . . B 2 -40.585 21.877 32.933 1 60.79 ? F2 4Y5 601 A 1 HETATM 33 F F3 4Y5 . . . B 2 -41.085 20.131 34.043 1 60.28 ? F3 4Y5 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #