data_5C4T # _model_server_result.job_id BOBlzZxWqdrspWyPaWHXLQ _model_server_result.datetime_utc '2024-10-12 16:37:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c4t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5C4T # _exptl.entry_id 5C4T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 480.839 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S)-4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-4-fluoro-1H-indazol-3-yl}-1-methylcyclohex-3-ene-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5C4T _cell.length_a 107.27 _cell.length_b 107.27 _cell.length_c 100.39 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C4T _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H17 Cl F4 N2 O3' _chem_comp.formula_weight 480.839 _chem_comp.id 4Y6 _chem_comp.mon_nstd_flag . _chem_comp.name '(1S)-4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-4-fluoro-1H-indazol-3-yl}-1-methylcyclohex-3-ene-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 4Y6 doub 1 n y C2 C1 4Y6 sing 2 n y C3 C4 4Y6 sing 3 n y C1 C 4Y6 doub 4 n y O C7 4Y6 doub 5 n n C4 N1 4Y6 sing 6 n y C4 C5 4Y6 doub 7 n y C7 N1 4Y6 sing 8 n n C7 C8 4Y6 sing 9 n n C C5 4Y6 sing 10 n y C F3 4Y6 sing 11 n n CL C9 4Y6 sing 12 n n N1 N 4Y6 sing 13 n y C5 C6 4Y6 sing 14 n y F1 C14 4Y6 sing 15 n n C8 C9 4Y6 doub 16 n y C8 C13 4Y6 sing 17 n y C9 C10 4Y6 sing 18 n y N C6 4Y6 doub 19 n y C10 C11 4Y6 doub 20 n y C13 C14 4Y6 sing 21 n n C13 C12 4Y6 doub 22 n y C6 C15 4Y6 sing 23 n n C14 F 4Y6 sing 24 n n C14 F2 4Y6 sing 25 n n C11 C12 4Y6 sing 26 n y C15 C20 4Y6 doub 27 n n C15 C16 4Y6 sing 28 n n C20 C19 4Y6 sing 29 n n C16 C17 4Y6 sing 30 n n C19 C18 4Y6 sing 31 n n C17 C18 4Y6 sing 32 n n C18 C22 4Y6 sing 33 n n C18 C21 4Y6 sing 34 n n C21 O2 4Y6 doub 35 n n C21 O1 4Y6 sing 36 n n C20 H1 4Y6 sing 37 n n C19 H2 4Y6 sing 38 n n C19 H3 4Y6 sing 39 n n C22 H4 4Y6 sing 40 n n C22 H5 4Y6 sing 41 n n C22 H6 4Y6 sing 42 n n O1 H7 4Y6 sing 43 n n C17 H8 4Y6 sing 44 n n C17 H9 4Y6 sing 45 n n C16 H10 4Y6 sing 46 n n C16 H11 4Y6 sing 47 n n C3 H12 4Y6 sing 48 n n C2 H13 4Y6 sing 49 n n C1 H14 4Y6 sing 50 n n C12 H15 4Y6 sing 51 n n C11 H16 4Y6 sing 52 n n C10 H17 4Y6 sing 53 n n # _atom_sites.entry_id 5C4T _atom_sites.fract_transf_matrix[1][1] 0.009322 _atom_sites.fract_transf_matrix[1][2] 0.005382 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4Y6 A 1 601 1 4Y6 673 . C 3 SO4 A 1 602 1 SO4 SO4 . D 3 SO4 A 1 603 2 SO4 SO4 . E 4 GOL A 1 604 1 GOL GOL . F 4 GOL A 1 605 2 GOL GOL . G 4 GOL A 1 606 3 GOL GOL . H 4 GOL A 1 607 4 GOL GOL . I 4 GOL A 1 608 5 GOL GOL . J 4 GOL A 1 609 6 GOL GOL . K 4 GOL A 1 610 7 GOL GOL . L 5 HOH A 1 701 84 HOH HOH . L 5 HOH A 2 702 21 HOH HOH . L 5 HOH A 3 703 89 HOH HOH . L 5 HOH A 4 704 55 HOH HOH . L 5 HOH A 5 705 91 HOH HOH . L 5 HOH A 6 706 72 HOH HOH . L 5 HOH A 7 707 83 HOH HOH . L 5 HOH A 8 708 38 HOH HOH . L 5 HOH A 9 709 15 HOH HOH . L 5 HOH A 10 710 99 HOH HOH . L 5 HOH A 11 711 10 HOH HOH . L 5 HOH A 12 712 18 HOH HOH . L 5 HOH A 13 713 47 HOH HOH . L 5 HOH A 14 714 34 HOH HOH . L 5 HOH A 15 715 37 HOH HOH . L 5 HOH A 16 716 36 HOH HOH . L 5 HOH A 17 717 65 HOH HOH . L 5 HOH A 18 718 82 HOH HOH . L 5 HOH A 19 719 35 HOH HOH . L 5 HOH A 20 720 45 HOH HOH . L 5 HOH A 21 721 13 HOH HOH . L 5 HOH A 22 722 68 HOH HOH . L 5 HOH A 23 723 58 HOH HOH . L 5 HOH A 24 724 100 HOH HOH . L 5 HOH A 25 725 29 HOH HOH . L 5 HOH A 26 726 39 HOH HOH . L 5 HOH A 27 727 81 HOH HOH . L 5 HOH A 28 728 32 HOH HOH . L 5 HOH A 29 729 60 HOH HOH . L 5 HOH A 30 730 14 HOH HOH . L 5 HOH A 31 731 80 HOH HOH . L 5 HOH A 32 732 2 HOH HOH . L 5 HOH A 33 733 54 HOH HOH . L 5 HOH A 34 734 85 HOH HOH . L 5 HOH A 35 735 11 HOH HOH . L 5 HOH A 36 736 97 HOH HOH . L 5 HOH A 37 737 5 HOH HOH . L 5 HOH A 38 738 56 HOH HOH . L 5 HOH A 39 739 9 HOH HOH . L 5 HOH A 40 740 92 HOH HOH . L 5 HOH A 41 741 4 HOH HOH . L 5 HOH A 42 742 23 HOH HOH . L 5 HOH A 43 743 49 HOH HOH . L 5 HOH A 44 744 50 HOH HOH . L 5 HOH A 45 745 42 HOH HOH . L 5 HOH A 46 746 88 HOH HOH . L 5 HOH A 47 747 7 HOH HOH . L 5 HOH A 48 748 16 HOH HOH . L 5 HOH A 49 749 1 HOH HOH . L 5 HOH A 50 750 24 HOH HOH . L 5 HOH A 51 751 6 HOH HOH . L 5 HOH A 52 752 87 HOH HOH . L 5 HOH A 53 753 51 HOH HOH . L 5 HOH A 54 754 12 HOH HOH . L 5 HOH A 55 755 61 HOH HOH . L 5 HOH A 56 756 3 HOH HOH . L 5 HOH A 57 757 19 HOH HOH . L 5 HOH A 58 758 22 HOH HOH . L 5 HOH A 59 759 40 HOH HOH . L 5 HOH A 60 760 17 HOH HOH . L 5 HOH A 61 761 93 HOH HOH . L 5 HOH A 62 762 28 HOH HOH . L 5 HOH A 63 763 62 HOH HOH . L 5 HOH A 64 764 66 HOH HOH . L 5 HOH A 65 765 20 HOH HOH . L 5 HOH A 66 766 94 HOH HOH . L 5 HOH A 67 767 101 HOH HOH . L 5 HOH A 68 768 90 HOH HOH . L 5 HOH A 69 769 46 HOH HOH . L 5 HOH A 70 770 67 HOH HOH . L 5 HOH A 71 771 86 HOH HOH . L 5 HOH A 72 772 96 HOH HOH . L 5 HOH A 73 773 98 HOH HOH . L 5 HOH A 74 774 26 HOH HOH . L 5 HOH A 75 775 31 HOH HOH . L 5 HOH A 76 776 64 HOH HOH . L 5 HOH A 77 777 27 HOH HOH . L 5 HOH A 78 778 33 HOH HOH . L 5 HOH A 79 779 70 HOH HOH . L 5 HOH A 80 780 75 HOH HOH . L 5 HOH A 81 781 52 HOH HOH . L 5 HOH A 82 782 95 HOH HOH . L 5 HOH A 83 783 76 HOH HOH . L 5 HOH A 84 784 69 HOH HOH . L 5 HOH A 85 785 57 HOH HOH . L 5 HOH A 86 786 25 HOH HOH . L 5 HOH A 87 787 59 HOH HOH . L 5 HOH A 88 788 77 HOH HOH . L 5 HOH A 89 789 8 HOH HOH . L 5 HOH A 90 790 41 HOH HOH . L 5 HOH A 91 791 44 HOH HOH . L 5 HOH A 92 792 73 HOH HOH . L 5 HOH A 93 793 79 HOH HOH . L 5 HOH A 94 794 74 HOH HOH . L 5 HOH A 95 795 30 HOH HOH . L 5 HOH A 96 796 43 HOH HOH . L 5 HOH A 97 797 53 HOH HOH . L 5 HOH A 98 798 78 HOH HOH . L 5 HOH A 99 799 71 HOH HOH . L 5 HOH A 100 800 63 HOH HOH . L 5 HOH A 101 801 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F3 4Y6 . A . B 2 -38.581 25.313 31.093 0.5 26.79 ? F3 4Y6 601 A 1 HETATM 2 F F3 4Y6 . B . B 2 -38.445 25.061 30.769 0.5 28.23 ? F3 4Y6 601 A 1 HETATM 3 C C 4Y6 . A . B 2 -39.108 24.326 30.337 0.5 25.73 ? C 4Y6 601 A 1 HETATM 4 C C 4Y6 . B . B 2 -39.026 24.062 30.071 0.5 30.13 ? C 4Y6 601 A 1 HETATM 5 C C5 4Y6 . A . B 2 -38.983 23.013 30.786 0.5 23.45 ? C5 4Y6 601 A 1 HETATM 6 C C5 4Y6 . B . B 2 -38.942 22.769 30.579 0.5 29.55 ? C5 4Y6 601 A 1 HETATM 7 C C6 4Y6 . A . B 2 -38.454 22.281 31.912 0.5 25.15 ? C6 4Y6 601 A 1 HETATM 8 C C6 4Y6 . B . B 2 -38.37 22.067 31.707 0.5 31.63 ? C6 4Y6 601 A 1 HETATM 9 C C15 4Y6 . A . B 2 -37.756 22.782 33.097 0.5 25.43 ? C15 4Y6 601 A 1 HETATM 10 C C15 4Y6 . B . B 2 -37.584 22.633 32.826 0.5 32.77 ? C15 4Y6 601 A 1 HETATM 11 C C20 4Y6 . A . B 2 -38.207 23.849 33.748 0.5 26.21 ? C20 4Y6 601 A 1 HETATM 12 C C20 4Y6 . B . B 2 -36.33 22.198 33.099 0.5 33.2 ? C20 4Y6 601 A 1 HETATM 13 C C19 4Y6 . A . B 2 -37.593 24.393 35.004 0.5 26.98 ? C19 4Y6 601 A 1 HETATM 14 C C19 4Y6 . B . B 2 -35.471 22.736 34.217 0.5 33.31 ? C19 4Y6 601 A 1 HETATM 15 C C18 4Y6 . A . B 2 -36.086 24.074 35.087 0.5 29.91 ? C18 4Y6 601 A 1 HETATM 16 C C18 4Y6 . B . B 2 -36.296 23.41 35.338 0.5 33.43 ? C18 4Y6 601 A 1 HETATM 17 C C22 4Y6 . A . B 2 -35.31 24.908 34.052 0.5 29.92 ? C22 4Y6 601 A 1 HETATM 18 C C22 4Y6 . B . B 2 -36.974 22.348 36.216 0.5 33.32 ? C22 4Y6 601 A 1 HETATM 19 C C21 4Y6 . A . B 2 -35.547 24.526 36.461 0.5 32.3 ? C21 4Y6 601 A 1 HETATM 20 C C21 4Y6 . B . B 2 -35.366 24.194 36.289 0.5 33.91 ? C21 4Y6 601 A 1 HETATM 21 O O2 4Y6 . A . B 2 -34.344 24.286 36.667 0.5 33.71 ? O2 4Y6 601 A 1 HETATM 22 O O2 4Y6 . B . B 2 -35.924 24.898 37.153 0.5 35.38 ? O2 4Y6 601 A 1 HETATM 23 O O1 4Y6 . A . B 2 -36.328 25.104 37.243 0.5 34.47 -1 O1 4Y6 601 A 1 HETATM 24 O O1 4Y6 . B . B 2 -34.138 24.08 36.152 0.5 33.85 -1 O1 4Y6 601 A 1 HETATM 25 C C17 4Y6 . A . B 2 -35.857 22.562 34.849 0.5 28.8 ? C17 4Y6 601 A 1 HETATM 26 C C17 4Y6 . B . B 2 -37.352 24.355 34.724 0.5 33.78 ? C17 4Y6 601 A 1 HETATM 27 C C16 4Y6 . A . B 2 -36.534 22.01 33.57 0.5 26.74 ? C16 4Y6 601 A 1 HETATM 28 C C16 4Y6 . B . B 2 -38.254 23.688 33.669 0.5 32.75 ? C16 4Y6 601 A 1 HETATM 29 N N 4Y6 . A . B 2 -38.677 20.98 31.769 0.5 23.06 ? N 4Y6 601 A 1 HETATM 30 N N 4Y6 . B . B 2 -38.66 20.771 31.645 0.5 31.01 ? N 4Y6 601 A 1 HETATM 31 N N1 4Y6 . A . B 2 -39.33 20.813 30.567 0.5 23.73 ? N1 4Y6 601 A 1 HETATM 32 N N1 4Y6 . B . B 2 -39.411 20.583 30.494 0.5 32.03 ? N1 4Y6 601 A 1 HETATM 33 C C4 4Y6 . A . B 2 -39.543 22.025 29.939 0.5 25.29 ? C4 4Y6 601 A 1 HETATM 34 C C4 4Y6 . B . B 2 -39.602 21.773 29.818 0.5 30.69 ? C4 4Y6 601 A 1 HETATM 35 C C3 4Y6 . A . B 2 -40.169 22.345 28.736 0.5 26.57 ? C3 4Y6 601 A 1 HETATM 36 C C3 4Y6 . B . B 2 -40.272 22.066 28.632 0.5 27.85 ? C3 4Y6 601 A 1 HETATM 37 C C2 4Y6 . A . B 2 -40.256 23.675 28.358 0.5 25.71 ? C2 4Y6 601 A 1 HETATM 38 C C2 4Y6 . B . B 2 -40.298 23.376 28.182 0.5 28.62 ? C2 4Y6 601 A 1 HETATM 39 C C1 4Y6 . A . B 2 -39.733 24.677 29.162 0.5 25.16 ? C1 4Y6 601 A 1 HETATM 40 C C1 4Y6 . B . B 2 -39.683 24.387 28.905 0.5 29.7 ? C1 4Y6 601 A 1 HETATM 41 C C7 4Y6 . A . B 2 -39.659 19.516 30.151 0.5 23.48 ? C7 4Y6 601 A 1 HETATM 42 C C7 4Y6 . B . B 2 -39.87 19.299 30.152 0.5 34.86 ? C7 4Y6 601 A 1 HETATM 43 O O 4Y6 . A . B 2 -40.23 19.314 29.09 0.5 25.68 ? O 4Y6 601 A 1 HETATM 44 O O 4Y6 . B . B 2 -40.723 19.146 29.291 0.5 36.16 ? O 4Y6 601 A 1 HETATM 45 C C8 4Y6 . A . B 2 -39.284 18.359 31.045 0.5 22.73 ? C8 4Y6 601 A 1 HETATM 46 C C8 4Y6 . B . B 2 -39.401 18.116 30.964 0.5 37.27 ? C8 4Y6 601 A 1 HETATM 47 C C13 4Y6 . A . B 2 -40.261 17.625 31.753 0.5 23.99 ? C13 4Y6 601 A 1 HETATM 48 C C13 4Y6 . B . B 2 -40.273 17.411 31.828 0.5 40.52 ? C13 4Y6 601 A 1 HETATM 49 C C14 4Y6 . A . B 2 -41.709 18.036 31.769 0.5 27.3 ? C14 4Y6 601 A 1 HETATM 50 C C14 4Y6 . B . B 2 -41.695 17.847 32.069 0.5 44.55 ? C14 4Y6 601 A 1 HETATM 51 F F2 4Y6 . A . B 2 -42.38 17.513 32.794 0.5 27.93 ? F2 4Y6 601 A 1 HETATM 52 F F2 4Y6 . B . B 2 -42.292 17.14 33.019 0.5 44.64 ? F2 4Y6 601 A 1 HETATM 53 F F1 4Y6 . A . B 2 -42.351 17.671 30.674 0.5 28.7 ? F1 4Y6 601 A 1 HETATM 54 F F1 4Y6 . B . B 2 -42.457 17.726 30.99 0.5 44.64 ? F1 4Y6 601 A 1 HETATM 55 F F 4Y6 . A . B 2 -41.876 19.368 31.842 0.5 23.46 ? F 4Y6 601 A 1 HETATM 56 F F 4Y6 . B . B 2 -41.786 19.123 32.452 0.5 47.47 ? F 4Y6 601 A 1 HETATM 57 C C12 4Y6 . A . B 2 -39.875 16.504 32.48 0.5 23.32 ? C12 4Y6 601 A 1 HETATM 58 C C12 4Y6 . B . B 2 -39.807 16.286 32.5 0.5 40.39 ? C12 4Y6 601 A 1 HETATM 59 C C11 4Y6 . A . B 2 -38.543 16.117 32.531 0.5 23.89 ? C11 4Y6 601 A 1 HETATM 60 C C11 4Y6 . B . B 2 -38.499 15.857 32.338 0.5 39.98 ? C11 4Y6 601 A 1 HETATM 61 C C10 4Y6 . A . B 2 -37.572 16.854 31.871 0.5 24.95 ? C10 4Y6 601 A 1 HETATM 62 C C10 4Y6 . B . B 2 -37.629 16.551 31.512 0.5 39.01 ? C10 4Y6 601 A 1 HETATM 63 C C9 4Y6 . A . B 2 -37.948 17.974 31.15 0.5 24.08 ? C9 4Y6 601 A 1 HETATM 64 C C9 4Y6 . B . B 2 -38.082 17.676 30.843 0.5 37.22 ? C9 4Y6 601 A 1 HETATM 65 CL CL 4Y6 . A . B 2 -36.707 18.965 30.458 0.5 26.11 ? CL 4Y6 601 A 1 HETATM 66 CL CL 4Y6 . B . B 2 -36.946 18.573 29.889 0.5 36.05 ? CL 4Y6 601 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 66 #