data_5C4T
#
_model_server_result.job_id            ut5rEAeDGHJeZQSU9SM9QQ 
_model_server_result.datetime_utc      '2024-10-12 16:36:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5c4t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":604}' 
#
_entry.id    5C4T 
#
_exptl.entry_id    5C4T 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5C4T 
_cell.length_a            107.27 
_cell.length_b            107.27 
_cell.length_c            100.39 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5C4T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 182 n n 
C1 C2 GOL sing 183 n n 
C1 H11 GOL sing 184 n n 
C1 H12 GOL sing 185 n n 
O1 HO1 GOL sing 186 n n 
C2 O2 GOL sing 187 n n 
C2 C3 GOL sing 188 n n 
C2 H2 GOL sing 189 n n 
O2 HO2 GOL sing 190 n n 
C3 O3 GOL sing 191 n n 
C3 H31 GOL sing 192 n n 
C3 H32 GOL sing 193 n n 
O3 HO3 GOL sing 194 n n 
#
_atom_sites.entry_id                     5C4T 
_atom_sites.fract_transf_matrix[1][1]    0.009322 
_atom_sites.fract_transf_matrix[1][2]    0.005382 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010764 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009961 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 4Y6 A 1 601 1 4Y6 673 . 
C 3 SO4 A 1 602 1 SO4 SO4 . 
D 3 SO4 A 1 603 2 SO4 SO4 . 
E 4 GOL A 1 604 1 GOL GOL . 
F 4 GOL A 1 605 2 GOL GOL . 
G 4 GOL A 1 606 3 GOL GOL . 
H 4 GOL A 1 607 4 GOL GOL . 
I 4 GOL A 1 608 5 GOL GOL . 
J 4 GOL A 1 609 6 GOL GOL . 
K 4 GOL A 1 610 7 GOL GOL . 
L 5 HOH A 1 701 84 HOH HOH . 
L 5 HOH A 2 702 21 HOH HOH . 
L 5 HOH A 3 703 89 HOH HOH . 
L 5 HOH A 4 704 55 HOH HOH . 
L 5 HOH A 5 705 91 HOH HOH . 
L 5 HOH A 6 706 72 HOH HOH . 
L 5 HOH A 7 707 83 HOH HOH . 
L 5 HOH A 8 708 38 HOH HOH . 
L 5 HOH A 9 709 15 HOH HOH . 
L 5 HOH A 10 710 99 HOH HOH . 
L 5 HOH A 11 711 10 HOH HOH . 
L 5 HOH A 12 712 18 HOH HOH . 
L 5 HOH A 13 713 47 HOH HOH . 
L 5 HOH A 14 714 34 HOH HOH . 
L 5 HOH A 15 715 37 HOH HOH . 
L 5 HOH A 16 716 36 HOH HOH . 
L 5 HOH A 17 717 65 HOH HOH . 
L 5 HOH A 18 718 82 HOH HOH . 
L 5 HOH A 19 719 35 HOH HOH . 
L 5 HOH A 20 720 45 HOH HOH . 
L 5 HOH A 21 721 13 HOH HOH . 
L 5 HOH A 22 722 68 HOH HOH . 
L 5 HOH A 23 723 58 HOH HOH . 
L 5 HOH A 24 724 100 HOH HOH . 
L 5 HOH A 25 725 29 HOH HOH . 
L 5 HOH A 26 726 39 HOH HOH . 
L 5 HOH A 27 727 81 HOH HOH . 
L 5 HOH A 28 728 32 HOH HOH . 
L 5 HOH A 29 729 60 HOH HOH . 
L 5 HOH A 30 730 14 HOH HOH . 
L 5 HOH A 31 731 80 HOH HOH . 
L 5 HOH A 32 732 2 HOH HOH . 
L 5 HOH A 33 733 54 HOH HOH . 
L 5 HOH A 34 734 85 HOH HOH . 
L 5 HOH A 35 735 11 HOH HOH . 
L 5 HOH A 36 736 97 HOH HOH . 
L 5 HOH A 37 737 5 HOH HOH . 
L 5 HOH A 38 738 56 HOH HOH . 
L 5 HOH A 39 739 9 HOH HOH . 
L 5 HOH A 40 740 92 HOH HOH . 
L 5 HOH A 41 741 4 HOH HOH . 
L 5 HOH A 42 742 23 HOH HOH . 
L 5 HOH A 43 743 49 HOH HOH . 
L 5 HOH A 44 744 50 HOH HOH . 
L 5 HOH A 45 745 42 HOH HOH . 
L 5 HOH A 46 746 88 HOH HOH . 
L 5 HOH A 47 747 7 HOH HOH . 
L 5 HOH A 48 748 16 HOH HOH . 
L 5 HOH A 49 749 1 HOH HOH . 
L 5 HOH A 50 750 24 HOH HOH . 
L 5 HOH A 51 751 6 HOH HOH . 
L 5 HOH A 52 752 87 HOH HOH . 
L 5 HOH A 53 753 51 HOH HOH . 
L 5 HOH A 54 754 12 HOH HOH . 
L 5 HOH A 55 755 61 HOH HOH . 
L 5 HOH A 56 756 3 HOH HOH . 
L 5 HOH A 57 757 19 HOH HOH . 
L 5 HOH A 58 758 22 HOH HOH . 
L 5 HOH A 59 759 40 HOH HOH . 
L 5 HOH A 60 760 17 HOH HOH . 
L 5 HOH A 61 761 93 HOH HOH . 
L 5 HOH A 62 762 28 HOH HOH . 
L 5 HOH A 63 763 62 HOH HOH . 
L 5 HOH A 64 764 66 HOH HOH . 
L 5 HOH A 65 765 20 HOH HOH . 
L 5 HOH A 66 766 94 HOH HOH . 
L 5 HOH A 67 767 101 HOH HOH . 
L 5 HOH A 68 768 90 HOH HOH . 
L 5 HOH A 69 769 46 HOH HOH . 
L 5 HOH A 70 770 67 HOH HOH . 
L 5 HOH A 71 771 86 HOH HOH . 
L 5 HOH A 72 772 96 HOH HOH . 
L 5 HOH A 73 773 98 HOH HOH . 
L 5 HOH A 74 774 26 HOH HOH . 
L 5 HOH A 75 775 31 HOH HOH . 
L 5 HOH A 76 776 64 HOH HOH . 
L 5 HOH A 77 777 27 HOH HOH . 
L 5 HOH A 78 778 33 HOH HOH . 
L 5 HOH A 79 779 70 HOH HOH . 
L 5 HOH A 80 780 75 HOH HOH . 
L 5 HOH A 81 781 52 HOH HOH . 
L 5 HOH A 82 782 95 HOH HOH . 
L 5 HOH A 83 783 76 HOH HOH . 
L 5 HOH A 84 784 69 HOH HOH . 
L 5 HOH A 85 785 57 HOH HOH . 
L 5 HOH A 86 786 25 HOH HOH . 
L 5 HOH A 87 787 59 HOH HOH . 
L 5 HOH A 88 788 77 HOH HOH . 
L 5 HOH A 89 789 8 HOH HOH . 
L 5 HOH A 90 790 41 HOH HOH . 
L 5 HOH A 91 791 44 HOH HOH . 
L 5 HOH A 92 792 73 HOH HOH . 
L 5 HOH A 93 793 79 HOH HOH . 
L 5 HOH A 94 794 74 HOH HOH . 
L 5 HOH A 95 795 30 HOH HOH . 
L 5 HOH A 96 796 43 HOH HOH . 
L 5 HOH A 97 797 53 HOH HOH . 
L 5 HOH A 98 798 78 HOH HOH . 
L 5 HOH A 99 799 71 HOH HOH . 
L 5 HOH A 100 800 63 HOH HOH . 
L 5 HOH A 101 801 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -20.041 42.165 12.253 1 52.1 ? C1 GOL 604 A 1 
HETATM 2 O O1 GOL . . . E 4 -18.666 41.897 12.465 1 53.47 ? O1 GOL 604 A 1 
HETATM 3 C C2 GOL . . . E 4 -20.947 41.095 12.819 1 51.45 ? C2 GOL 604 A 1 
HETATM 4 O O2 GOL . . . E 4 -21.056 41.266 14.233 1 51.26 ? O2 GOL 604 A 1 
HETATM 5 C C3 GOL . . . E 4 -22.323 41.199 12.204 1 50.21 ? C3 GOL 604 A 1 
HETATM 6 O O3 GOL . . . E 4 -22.568 40.124 11.308 1 46.72 ? O3 GOL 604 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#