data_5C4Y
#
_model_server_result.job_id            vwMtcCuGIQxSzoMkjw7ftg 
_model_server_result.datetime_utc      '2024-10-19 15:24:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5c4y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5C4Y 
#
_exptl.entry_id    5C4Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.97 
_cell.angle_gamma         90 
_cell.entry_id            5C4Y 
_cell.length_a            195.697 
_cell.length_b            52.169 
_cell.length_c            50.403 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5C4Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLN 58 A GLN 58 1_555 A N MSE 59 A MSE 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale2 A C MSE 59 A MSE 59 1_555 A N GLU 60 A GLU 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale3 A C TRP 145 A TRP 145 1_555 A N MSE 146 A MSE 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C MSE 146 A MSE 146 1_555 A N HIS 147 A HIS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale5 B C GLN 58 B GLN 58 1_555 B N MSE 59 B MSE 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 B C MSE 59 B MSE 59 1_555 B N GLU 60 B GLU 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale7 B C TRP 145 B TRP 145 1_555 B N MSE 146 B MSE 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale8 B C MSE 146 B MSE 146 1_555 B N HIS 147 B HIS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
_atom_sites.entry_id                     5C4Y 
_atom_sites.fract_transf_matrix[1][1]    0.00511 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001367 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019168 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020537 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 201 201 EDO EDO . 
D 2 EDO B 1 201 201 EDO EDO . 
E 3 HOH A 1 301 47 HOH HOH . 
E 3 HOH A 2 302 125 HOH HOH . 
E 3 HOH A 3 303 169 HOH HOH . 
E 3 HOH A 4 304 137 HOH HOH . 
E 3 HOH A 5 305 154 HOH HOH . 
E 3 HOH A 6 306 116 HOH HOH . 
E 3 HOH A 7 307 112 HOH HOH . 
E 3 HOH A 8 308 140 HOH HOH . 
E 3 HOH A 9 309 96 HOH HOH . 
E 3 HOH A 10 310 32 HOH HOH . 
E 3 HOH A 11 311 118 HOH HOH . 
E 3 HOH A 12 312 71 HOH HOH . 
E 3 HOH A 13 313 109 HOH HOH . 
E 3 HOH A 14 314 21 HOH HOH . 
E 3 HOH A 15 315 130 HOH HOH . 
E 3 HOH A 16 316 29 HOH HOH . 
E 3 HOH A 17 317 51 HOH HOH . 
E 3 HOH A 18 318 149 HOH HOH . 
E 3 HOH A 19 319 59 HOH HOH . 
E 3 HOH A 20 320 147 HOH HOH . 
E 3 HOH A 21 321 168 HOH HOH . 
E 3 HOH A 22 322 7 HOH HOH . 
E 3 HOH A 23 323 50 HOH HOH . 
E 3 HOH A 24 324 42 HOH HOH . 
E 3 HOH A 25 325 2 HOH HOH . 
E 3 HOH A 26 326 167 HOH HOH . 
E 3 HOH A 27 327 54 HOH HOH . 
E 3 HOH A 28 328 12 HOH HOH . 
E 3 HOH A 29 329 6 HOH HOH . 
E 3 HOH A 30 330 92 HOH HOH . 
E 3 HOH A 31 331 38 HOH HOH . 
E 3 HOH A 32 332 46 HOH HOH . 
E 3 HOH A 33 333 55 HOH HOH . 
E 3 HOH A 34 334 85 HOH HOH . 
E 3 HOH A 35 335 143 HOH HOH . 
E 3 HOH A 36 336 52 HOH HOH . 
E 3 HOH A 37 337 128 HOH HOH . 
E 3 HOH A 38 338 87 HOH HOH . 
E 3 HOH A 39 339 39 HOH HOH . 
E 3 HOH A 40 340 73 HOH HOH . 
E 3 HOH A 41 341 23 HOH HOH . 
E 3 HOH A 42 342 83 HOH HOH . 
E 3 HOH A 43 343 9 HOH HOH . 
E 3 HOH A 44 344 102 HOH HOH . 
E 3 HOH A 45 345 79 HOH HOH . 
E 3 HOH A 46 346 129 HOH HOH . 
E 3 HOH A 47 347 122 HOH HOH . 
E 3 HOH A 48 348 100 HOH HOH . 
E 3 HOH A 49 349 34 HOH HOH . 
E 3 HOH A 50 350 22 HOH HOH . 
E 3 HOH A 51 351 104 HOH HOH . 
E 3 HOH A 52 352 20 HOH HOH . 
E 3 HOH A 53 353 77 HOH HOH . 
E 3 HOH A 54 354 99 HOH HOH . 
E 3 HOH A 55 355 124 HOH HOH . 
E 3 HOH A 56 356 28 HOH HOH . 
E 3 HOH A 57 357 107 HOH HOH . 
E 3 HOH A 58 358 121 HOH HOH . 
E 3 HOH A 59 359 3 HOH HOH . 
E 3 HOH A 60 360 134 HOH HOH . 
E 3 HOH A 61 361 151 HOH HOH . 
E 3 HOH A 62 362 132 HOH HOH . 
E 3 HOH A 63 363 152 HOH HOH . 
E 3 HOH A 64 364 49 HOH HOH . 
E 3 HOH A 65 365 57 HOH HOH . 
E 3 HOH A 66 366 141 HOH HOH . 
E 3 HOH A 67 367 18 HOH HOH . 
E 3 HOH A 68 368 114 HOH HOH . 
E 3 HOH A 69 369 163 HOH HOH . 
E 3 HOH A 70 370 111 HOH HOH . 
E 3 HOH A 71 371 155 HOH HOH . 
E 3 HOH A 72 372 72 HOH HOH . 
E 3 HOH A 73 373 61 HOH HOH . 
E 3 HOH A 74 374 165 HOH HOH . 
E 3 HOH A 75 375 80 HOH HOH . 
E 3 HOH A 76 376 63 HOH HOH . 
E 3 HOH A 77 377 67 HOH HOH . 
E 3 HOH A 78 378 145 HOH HOH . 
E 3 HOH A 79 379 97 HOH HOH . 
E 3 HOH A 80 380 106 HOH HOH . 
E 3 HOH A 81 381 53 HOH HOH . 
F 3 HOH B 1 301 37 HOH HOH . 
F 3 HOH B 2 302 64 HOH HOH . 
F 3 HOH B 3 303 133 HOH HOH . 
F 3 HOH B 4 304 160 HOH HOH . 
F 3 HOH B 5 305 153 HOH HOH . 
F 3 HOH B 6 306 103 HOH HOH . 
F 3 HOH B 7 307 166 HOH HOH . 
F 3 HOH B 8 308 120 HOH HOH . 
F 3 HOH B 9 309 48 HOH HOH . 
F 3 HOH B 10 310 68 HOH HOH . 
F 3 HOH B 11 311 159 HOH HOH . 
F 3 HOH B 12 312 90 HOH HOH . 
F 3 HOH B 13 313 17 HOH HOH . 
F 3 HOH B 14 314 81 HOH HOH . 
F 3 HOH B 15 315 89 HOH HOH . 
F 3 HOH B 16 316 93 HOH HOH . 
F 3 HOH B 17 317 148 HOH HOH . 
F 3 HOH B 18 318 75 HOH HOH . 
F 3 HOH B 19 319 8 HOH HOH . 
F 3 HOH B 20 320 158 HOH HOH . 
F 3 HOH B 21 321 13 HOH HOH . 
F 3 HOH B 22 322 33 HOH HOH . 
F 3 HOH B 23 323 26 HOH HOH . 
F 3 HOH B 24 324 56 HOH HOH . 
F 3 HOH B 25 325 1 HOH HOH . 
F 3 HOH B 26 326 10 HOH HOH . 
F 3 HOH B 27 327 19 HOH HOH . 
F 3 HOH B 28 328 119 HOH HOH . 
F 3 HOH B 29 329 14 HOH HOH . 
F 3 HOH B 30 330 139 HOH HOH . 
F 3 HOH B 31 331 43 HOH HOH . 
F 3 HOH B 32 332 70 HOH HOH . 
F 3 HOH B 33 333 11 HOH HOH . 
F 3 HOH B 34 334 98 HOH HOH . 
F 3 HOH B 35 335 41 HOH HOH . 
F 3 HOH B 36 336 161 HOH HOH . 
F 3 HOH B 37 337 27 HOH HOH . 
F 3 HOH B 38 338 69 HOH HOH . 
F 3 HOH B 39 339 142 HOH HOH . 
F 3 HOH B 40 340 40 HOH HOH . 
F 3 HOH B 41 341 35 HOH HOH . 
F 3 HOH B 42 342 5 HOH HOH . 
F 3 HOH B 43 343 16 HOH HOH . 
F 3 HOH B 44 344 45 HOH HOH . 
F 3 HOH B 45 345 123 HOH HOH . 
F 3 HOH B 46 346 58 HOH HOH . 
F 3 HOH B 47 347 146 HOH HOH . 
F 3 HOH B 48 348 117 HOH HOH . 
F 3 HOH B 49 349 25 HOH HOH . 
F 3 HOH B 50 350 95 HOH HOH . 
F 3 HOH B 51 351 74 HOH HOH . 
F 3 HOH B 52 352 127 HOH HOH . 
F 3 HOH B 53 353 15 HOH HOH . 
F 3 HOH B 54 354 135 HOH HOH . 
F 3 HOH B 55 355 157 HOH HOH . 
F 3 HOH B 56 356 78 HOH HOH . 
F 3 HOH B 57 357 94 HOH HOH . 
F 3 HOH B 58 358 91 HOH HOH . 
F 3 HOH B 59 359 44 HOH HOH . 
F 3 HOH B 60 360 82 HOH HOH . 
F 3 HOH B 61 361 24 HOH HOH . 
F 3 HOH B 62 362 36 HOH HOH . 
F 3 HOH B 63 363 108 HOH HOH . 
F 3 HOH B 64 364 115 HOH HOH . 
F 3 HOH B 65 365 86 HOH HOH . 
F 3 HOH B 66 366 30 HOH HOH . 
F 3 HOH B 67 367 84 HOH HOH . 
F 3 HOH B 68 368 113 HOH HOH . 
F 3 HOH B 69 369 150 HOH HOH . 
F 3 HOH B 70 370 164 HOH HOH . 
F 3 HOH B 71 371 4 HOH HOH . 
F 3 HOH B 72 372 31 HOH HOH . 
F 3 HOH B 73 373 136 HOH HOH . 
F 3 HOH B 74 374 105 HOH HOH . 
F 3 HOH B 75 375 110 HOH HOH . 
F 3 HOH B 76 376 156 HOH HOH . 
F 3 HOH B 77 377 76 HOH HOH . 
F 3 HOH B 78 378 60 HOH HOH . 
F 3 HOH B 79 379 88 HOH HOH . 
F 3 HOH B 80 380 138 HOH HOH . 
F 3 HOH B 81 381 65 HOH HOH . 
F 3 HOH B 82 382 66 HOH HOH . 
F 3 HOH B 83 383 126 HOH HOH . 
F 3 HOH B 84 384 62 HOH HOH . 
F 3 HOH B 85 385 144 HOH HOH . 
F 3 HOH B 86 386 162 HOH HOH . 
F 3 HOH B 87 387 131 HOH HOH . 
F 3 HOH B 88 388 101 HOH HOH . 
F 3 HOH B 89 389 170 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 78.675 44.699 15.121 1 62.87 ? C1 EDO 201 A 1 
HETATM 2 O O1 EDO . . . C 2 78.118 43.435 14.719 1 63.12 ? O1 EDO 201 A 1 
HETATM 3 C C2 EDO . . . C 2 80.103 44.874 14.597 1 62.55 ? C2 EDO 201 A 1 
HETATM 4 O O2 EDO . . . C 2 80.121 45.327 13.235 1 61.4 ? O2 EDO 201 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#