data_5C69 # _model_server_result.job_id 7leUHsjDRIHz-KogLwdKjQ _model_server_result.datetime_utc '2024-10-18 02:28:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":608}' # _entry.id 5C69 # _exptl.entry_id 5C69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C69 _cell.length_a 167.82 _cell.length_b 167.82 _cell.length_c 167.82 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 14_444 -y-1/4,-x-1/4,-z-1/4 0 -1 0 -1 0 0 0 0 -1 -41.955 -41.955 -41.955 5 'crystal symmetry operation' 19_444 -x-1/4,-z-1/4,-y-1/4 -1 0 0 0 0 -1 0 -1 0 -41.955 -41.955 -41.955 6 'crystal symmetry operation' 24_444 -z-1/4,-y-1/4,-x-1/4 0 0 -1 0 -1 0 -1 0 0 -41.955 -41.955 -41.955 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 37 1_555 A SG CYS 387 A CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 44 A CYS 69 1_555 A SG CYS 160 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 261 A CYS 286 1_555 A SG CYS 291 A CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 270 A CYS 295 1_555 A SG CYS 281 A CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 A SG CYS 306 A CYS 331 1_555 A SG CYS 315 A CYS 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 A SG CYS 330 A CYS 355 1_555 A SG CYS 341 A CYS 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 A SG CYS 364 A CYS 389 1_555 A SG CYS 370 A CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 237 n n C3' C4' NHE sing 238 n n C3' "H3'1" NHE sing 239 n n C3' "H3'2" NHE sing 240 n n C2' C1' NHE sing 241 n n C2' "H2'1" NHE sing 242 n n C2' "H2'2" NHE sing 243 n n C1' C6' NHE sing 244 n n C1' N NHE sing 245 n n C1' "HC'1" NHE sing 246 n n C6' C5' NHE sing 247 n n C6' "H6'1" NHE sing 248 n n C6' "H6'2" NHE sing 249 n n N C1 NHE sing 250 n n N HN NHE sing 251 n n C1 C2 NHE sing 252 n n C1 HC11 NHE sing 253 n n C1 HC12 NHE sing 254 n n C2 S NHE sing 255 n n C2 HC21 NHE sing 256 n n C2 HC22 NHE sing 257 n n S O1 NHE doub 258 n n S O2 NHE doub 259 n n S O3 NHE sing 260 n n O3 HO3 NHE sing 261 n n C5' C4' NHE sing 262 n n C5' "H5'1" NHE sing 263 n n C5' "H5'2" NHE sing 264 n n C4' "H4'1" NHE sing 265 n n C4' "H4'2" NHE sing 266 n n # _atom_sites.entry_id 5C69 _atom_sites.fract_transf_matrix[1][1] 0.005959 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 601 1 SO4 SO4 . C 2 SO4 A 1 602 2 SO4 SO4 . D 2 SO4 A 1 603 3 SO4 SO4 . E 2 SO4 A 1 604 4 SO4 SO4 . F 2 SO4 A 1 605 5 SO4 SO4 . G 2 SO4 A 1 606 6 SO4 SO4 . H 2 SO4 A 1 607 7 SO4 SO4 . I 3 NHE A 1 608 1 NHE NHE . J 3 NHE A 1 609 2 NHE NHE . K 4 CL A 1 610 1 CL CL . L 4 CL A 1 611 2 CL CL . M 4 CL A 1 612 3 CL CL . N 4 CL A 1 613 4 CL CL . O 4 CL A 1 614 5 CL CL . P 5 HOH A 1 701 140 HOH HOH . P 5 HOH A 2 702 87 HOH HOH . P 5 HOH A 3 703 34 HOH HOH . P 5 HOH A 4 704 10 HOH HOH . P 5 HOH A 5 705 167 HOH HOH . P 5 HOH A 6 706 129 HOH HOH . P 5 HOH A 7 707 22 HOH HOH . P 5 HOH A 8 708 27 HOH HOH . P 5 HOH A 9 709 12 HOH HOH . P 5 HOH A 10 710 8 HOH HOH . P 5 HOH A 11 711 50 HOH HOH . P 5 HOH A 12 712 154 HOH HOH . P 5 HOH A 13 713 38 HOH HOH . P 5 HOH A 14 714 60 HOH HOH . P 5 HOH A 15 715 18 HOH HOH . P 5 HOH A 16 716 6 HOH HOH . P 5 HOH A 17 717 39 HOH HOH . P 5 HOH A 18 718 99 HOH HOH . P 5 HOH A 19 719 59 HOH HOH . P 5 HOH A 20 720 74 HOH HOH . P 5 HOH A 21 721 67 HOH HOH . P 5 HOH A 22 722 64 HOH HOH . P 5 HOH A 23 723 113 HOH HOH . P 5 HOH A 24 724 116 HOH HOH . P 5 HOH A 25 725 117 HOH HOH . P 5 HOH A 26 726 13 HOH HOH . P 5 HOH A 27 727 107 HOH HOH . P 5 HOH A 28 728 71 HOH HOH . P 5 HOH A 29 729 25 HOH HOH . P 5 HOH A 30 730 15 HOH HOH . P 5 HOH A 31 731 123 HOH HOH . P 5 HOH A 32 732 54 HOH HOH . P 5 HOH A 33 733 40 HOH HOH . P 5 HOH A 34 734 68 HOH HOH . P 5 HOH A 35 735 49 HOH HOH . P 5 HOH A 36 736 4 HOH HOH . P 5 HOH A 37 737 52 HOH HOH . P 5 HOH A 38 738 48 HOH HOH . P 5 HOH A 39 739 142 HOH HOH . P 5 HOH A 40 740 104 HOH HOH . P 5 HOH A 41 741 88 HOH HOH . P 5 HOH A 42 742 150 HOH HOH . P 5 HOH A 43 743 35 HOH HOH . P 5 HOH A 44 744 94 HOH HOH . P 5 HOH A 45 745 41 HOH HOH . P 5 HOH A 46 746 109 HOH HOH . P 5 HOH A 47 747 138 HOH HOH . P 5 HOH A 48 748 132 HOH HOH . P 5 HOH A 49 749 14 HOH HOH . P 5 HOH A 50 750 7 HOH HOH . P 5 HOH A 51 751 125 HOH HOH . P 5 HOH A 52 752 93 HOH HOH . P 5 HOH A 53 753 141 HOH HOH . P 5 HOH A 54 754 86 HOH HOH . P 5 HOH A 55 755 66 HOH HOH . P 5 HOH A 56 756 130 HOH HOH . P 5 HOH A 57 757 56 HOH HOH . P 5 HOH A 58 758 45 HOH HOH . P 5 HOH A 59 759 42 HOH HOH . P 5 HOH A 60 760 51 HOH HOH . P 5 HOH A 61 761 84 HOH HOH . P 5 HOH A 62 762 120 HOH HOH . P 5 HOH A 63 763 92 HOH HOH . P 5 HOH A 64 764 23 HOH HOH . P 5 HOH A 65 765 16 HOH HOH . P 5 HOH A 66 766 80 HOH HOH . P 5 HOH A 67 767 62 HOH HOH . P 5 HOH A 68 768 2 HOH HOH . P 5 HOH A 69 769 78 HOH HOH . P 5 HOH A 70 770 11 HOH HOH . P 5 HOH A 71 771 81 HOH HOH . P 5 HOH A 72 772 28 HOH HOH . P 5 HOH A 73 773 1 HOH HOH . P 5 HOH A 74 774 24 HOH HOH . P 5 HOH A 75 775 19 HOH HOH . P 5 HOH A 76 776 166 HOH HOH . P 5 HOH A 77 777 33 HOH HOH . P 5 HOH A 78 778 36 HOH HOH . P 5 HOH A 79 779 20 HOH HOH . P 5 HOH A 80 780 98 HOH HOH . P 5 HOH A 81 781 9 HOH HOH . P 5 HOH A 82 782 5 HOH HOH . P 5 HOH A 83 783 95 HOH HOH . P 5 HOH A 84 784 79 HOH HOH . P 5 HOH A 85 785 21 HOH HOH . P 5 HOH A 86 786 29 HOH HOH . P 5 HOH A 87 787 149 HOH HOH . P 5 HOH A 88 788 75 HOH HOH . P 5 HOH A 89 789 43 HOH HOH . P 5 HOH A 90 790 90 HOH HOH . P 5 HOH A 91 791 111 HOH HOH . P 5 HOH A 92 792 63 HOH HOH . P 5 HOH A 93 793 3 HOH HOH . P 5 HOH A 94 794 151 HOH HOH . P 5 HOH A 95 795 44 HOH HOH . P 5 HOH A 96 796 100 HOH HOH . P 5 HOH A 97 797 136 HOH HOH . P 5 HOH A 98 798 31 HOH HOH . P 5 HOH A 99 799 58 HOH HOH . P 5 HOH A 100 800 65 HOH HOH . P 5 HOH A 101 801 147 HOH HOH . P 5 HOH A 102 802 77 HOH HOH . P 5 HOH A 103 803 72 HOH HOH . P 5 HOH A 104 804 30 HOH HOH . P 5 HOH A 105 805 61 HOH HOH . P 5 HOH A 106 806 82 HOH HOH . P 5 HOH A 107 807 46 HOH HOH . P 5 HOH A 108 808 32 HOH HOH . P 5 HOH A 109 809 156 HOH HOH . P 5 HOH A 110 810 76 HOH HOH . P 5 HOH A 111 811 85 HOH HOH . P 5 HOH A 112 812 160 HOH HOH . P 5 HOH A 113 813 131 HOH HOH . P 5 HOH A 114 814 47 HOH HOH . P 5 HOH A 115 815 91 HOH HOH . P 5 HOH A 116 816 118 HOH HOH . P 5 HOH A 117 817 124 HOH HOH . P 5 HOH A 118 818 139 HOH HOH . P 5 HOH A 119 819 108 HOH HOH . P 5 HOH A 120 820 69 HOH HOH . P 5 HOH A 121 821 73 HOH HOH . P 5 HOH A 122 822 164 HOH HOH . P 5 HOH A 123 823 110 HOH HOH . P 5 HOH A 124 824 115 HOH HOH . P 5 HOH A 125 825 103 HOH HOH . P 5 HOH A 126 826 165 HOH HOH . P 5 HOH A 127 827 126 HOH HOH . P 5 HOH A 128 828 70 HOH HOH . P 5 HOH A 129 829 17 HOH HOH . P 5 HOH A 130 830 83 HOH HOH . P 5 HOH A 131 831 105 HOH HOH . P 5 HOH A 132 832 112 HOH HOH . P 5 HOH A 133 833 135 HOH HOH . P 5 HOH A 134 834 127 HOH HOH . P 5 HOH A 135 835 53 HOH HOH . P 5 HOH A 136 836 89 HOH HOH . P 5 HOH A 137 837 119 HOH HOH . P 5 HOH A 138 838 152 HOH HOH . P 5 HOH A 139 839 128 HOH HOH . P 5 HOH A 140 840 171 HOH HOH . P 5 HOH A 141 841 26 HOH HOH . P 5 HOH A 142 842 163 HOH HOH . P 5 HOH A 143 843 102 HOH HOH . P 5 HOH A 144 844 169 HOH HOH . P 5 HOH A 145 845 153 HOH HOH . P 5 HOH A 146 846 137 HOH HOH . P 5 HOH A 147 847 96 HOH HOH . P 5 HOH A 148 848 174 HOH HOH . P 5 HOH A 149 849 145 HOH HOH . P 5 HOH A 150 850 175 HOH HOH . P 5 HOH A 151 851 158 HOH HOH . P 5 HOH A 152 852 170 HOH HOH . P 5 HOH A 153 853 146 HOH HOH . P 5 HOH A 154 854 101 HOH HOH . P 5 HOH A 155 855 173 HOH HOH . P 5 HOH A 156 856 122 HOH HOH . P 5 HOH A 157 857 148 HOH HOH . P 5 HOH A 158 858 55 HOH HOH . P 5 HOH A 159 859 121 HOH HOH . P 5 HOH A 160 860 57 HOH HOH . P 5 HOH A 161 861 157 HOH HOH . P 5 HOH A 162 862 144 HOH HOH . P 5 HOH A 163 863 161 HOH HOH . P 5 HOH A 164 864 114 HOH HOH . P 5 HOH A 165 865 172 HOH HOH . P 5 HOH A 166 866 37 HOH HOH . P 5 HOH A 167 867 143 HOH HOH . P 5 HOH A 168 868 155 HOH HOH . P 5 HOH A 169 869 134 HOH HOH . P 5 HOH A 170 870 106 HOH HOH . P 5 HOH A 171 871 97 HOH HOH . P 5 HOH A 172 872 159 HOH HOH . P 5 HOH A 173 873 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . I 3 20.741 16.871 17.05 1 89.57 ? C3' NHE 608 A 1 HETATM 2 C C2' NHE . . . I 3 20.499 15.791 16.006 1 89.35 ? C2' NHE 608 A 1 HETATM 3 C C1' NHE . . . I 3 19.238 15.006 16.302 1 88.93 ? C1' NHE 608 A 1 HETATM 4 C C6' NHE . . . I 3 19.254 14.432 17.705 1 88.81 ? C6' NHE 608 A 1 HETATM 5 N N NHE . . . I 3 19.094 13.951 15.339 1 88.65 ? N NHE 608 A 1 HETATM 6 C C1 NHE . . . I 3 18.132 14.402 14.376 1 89.2 ? C1 NHE 608 A 1 HETATM 7 C C2 NHE . . . I 3 17.835 13.296 13.292 1 179.35 ? C2 NHE 608 A 1 HETATM 8 S S NHE . . . I 3 18.296 13.957 11.669 1 89.97 ? S NHE 608 A 1 HETATM 9 O O1 NHE . . . I 3 19.719 13.646 11.383 1 90.33 ? O1 NHE 608 A 1 HETATM 10 O O2 NHE . . . I 3 17.385 13.422 10.576 1 90.09 ? O2 NHE 608 A 1 HETATM 11 O O3 NHE . . . I 3 18.3 15.467 11.685 1 88.6 ? O3 NHE 608 A 1 HETATM 12 C C5' NHE . . . I 3 19.506 15.485 18.75 1 88.78 ? C5' NHE 608 A 1 HETATM 13 C C4' NHE . . . I 3 20.748 16.326 18.451 1 89.04 ? C4' NHE 608 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 13 #