data_5C71
#
_model_server_result.job_id            fU09AePvso9JRKi4asF4oQ 
_model_server_result.datetime_utc      '2024-12-19 07:48:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5c71 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":702}' 
#
_entry.id    5C71 
#
_exptl.entry_id    5C71 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              194.139 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'alpha-D-glucopyranuronic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.27 
_cell.angle_beta          74.36 
_cell.angle_gamma         71.13 
_cell.entry_id            5C71 
_cell.length_a            96.068 
_cell.length_b            96.231 
_cell.length_c            96.192 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5C71 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 E O3 CBW . A CBW 701 1_555 F C1 GCU . A GCU 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? 
covale ? covale2 G O3 CBW . C CBW 701 1_555 H C1 GCU . C GCU 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? 
#
_chem_comp.formula           'C6 H10 O7' 
_chem_comp.formula_weight    194.139 
_chem_comp.id                GCU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'alpha-D-glucopyranuronic acid' 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     'alpha-D-glucuronic acid;D-glucuronic acid;glucuronic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GCU sing 167 n n 
C1 O1 GCU sing 168 n n 
C1 O5 GCU sing 169 n n 
C1 H1 GCU sing 170 n n 
C2 C3 GCU sing 171 n n 
C2 O2 GCU sing 172 n n 
C2 H2 GCU sing 173 n n 
C3 C4 GCU sing 174 n n 
C3 O3 GCU sing 175 n n 
C3 H3 GCU sing 176 n n 
C4 C5 GCU sing 177 n n 
C4 O4 GCU sing 178 n n 
C4 H4 GCU sing 179 n n 
C5 C6 GCU sing 180 n n 
C5 O5 GCU sing 181 n n 
C5 H5 GCU sing 182 n n 
C6 O6A GCU doub 183 n n 
C6 O6B GCU sing 184 n n 
O1 HO1 GCU sing 185 n n 
O2 HO2 GCU sing 186 n n 
O3 HO3 GCU sing 187 n n 
O4 HO4 GCU sing 188 n n 
O6B HO6B GCU sing 189 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GCU DGlcpAa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GCU 'a-D-glucopyranuronic acid' 'COMMON NAME' GMML 1 
GCU a-D-GlcpA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GCU GlcA 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     5C71 
_atom_sites.fract_transf_matrix[1][1]    0.010409 
_atom_sites.fract_transf_matrix[1][2]    -0.003558 
_atom_sites.fract_transf_matrix[1][3]    -0.003142 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010982 
_atom_sites.fract_transf_matrix[2][3]    0.000687 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010817 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CBW A 1 701 1001 CBW GRP . 
F 3 GCU A 1 702 1001 GCU GRP . 
G 2 CBW C 1 701 1003 CBW GRP . 
H 3 GCU C 1 702 1003 GCU GRP . 
I 4 HOH A 1 1101 164 HOH HOH . 
I 4 HOH A 2 1102 58 HOH HOH . 
I 4 HOH A 3 1103 153 HOH HOH . 
I 4 HOH A 4 1104 88 HOH HOH . 
I 4 HOH A 5 1105 150 HOH HOH . 
I 4 HOH A 6 1106 78 HOH HOH . 
I 4 HOH A 7 1107 133 HOH HOH . 
I 4 HOH A 8 1108 95 HOH HOH . 
I 4 HOH A 9 1109 94 HOH HOH . 
I 4 HOH A 10 1110 110 HOH HOH . 
I 4 HOH A 11 1111 93 HOH HOH . 
I 4 HOH A 12 1112 10 HOH HOH . 
I 4 HOH A 13 1113 45 HOH HOH . 
I 4 HOH A 14 1114 81 HOH HOH . 
I 4 HOH A 15 1115 36 HOH HOH . 
I 4 HOH A 16 1116 154 HOH HOH . 
I 4 HOH A 17 1117 62 HOH HOH . 
I 4 HOH A 18 1118 39 HOH HOH . 
I 4 HOH A 19 1119 37 HOH HOH . 
I 4 HOH A 20 1120 76 HOH HOH . 
I 4 HOH A 21 1121 149 HOH HOH . 
I 4 HOH A 22 1122 64 HOH HOH . 
I 4 HOH A 23 1123 119 HOH HOH . 
I 4 HOH A 24 1124 26 HOH HOH . 
I 4 HOH A 25 1125 99 HOH HOH . 
I 4 HOH A 26 1126 18 HOH HOH . 
I 4 HOH A 27 1127 108 HOH HOH . 
I 4 HOH A 28 1128 42 HOH HOH . 
I 4 HOH A 29 1129 15 HOH HOH . 
I 4 HOH A 30 1130 152 HOH HOH . 
I 4 HOH A 31 1131 159 HOH HOH . 
I 4 HOH A 32 1132 73 HOH HOH . 
I 4 HOH A 33 1133 25 HOH HOH . 
I 4 HOH A 34 1134 11 HOH HOH . 
I 4 HOH A 35 1135 24 HOH HOH . 
I 4 HOH A 36 1136 151 HOH HOH . 
I 4 HOH A 37 1137 22 HOH HOH . 
I 4 HOH A 38 1138 65 HOH HOH . 
I 4 HOH A 39 1139 124 HOH HOH . 
I 4 HOH A 40 1140 43 HOH HOH . 
I 4 HOH A 41 1141 74 HOH HOH . 
I 4 HOH A 42 1142 172 HOH HOH . 
I 4 HOH A 43 1143 53 HOH HOH . 
I 4 HOH A 44 1144 111 HOH HOH . 
I 4 HOH A 45 1145 85 HOH HOH . 
I 4 HOH A 46 1146 156 HOH HOH . 
I 4 HOH A 47 1147 6 HOH HOH . 
I 4 HOH A 48 1148 83 HOH HOH . 
I 4 HOH A 49 1149 50 HOH HOH . 
J 4 HOH B 1 701 46 HOH HOH . 
J 4 HOH B 2 702 116 HOH HOH . 
J 4 HOH B 3 703 67 HOH HOH . 
J 4 HOH B 4 704 48 HOH HOH . 
J 4 HOH B 5 705 33 HOH HOH . 
J 4 HOH B 6 706 68 HOH HOH . 
J 4 HOH B 7 707 173 HOH HOH . 
J 4 HOH B 8 708 20 HOH HOH . 
J 4 HOH B 9 709 122 HOH HOH . 
J 4 HOH B 10 710 155 HOH HOH . 
J 4 HOH B 11 711 131 HOH HOH . 
J 4 HOH B 12 712 51 HOH HOH . 
J 4 HOH B 13 713 17 HOH HOH . 
J 4 HOH B 14 714 41 HOH HOH . 
J 4 HOH B 15 715 49 HOH HOH . 
J 4 HOH B 16 716 169 HOH HOH . 
J 4 HOH B 17 717 167 HOH HOH . 
J 4 HOH B 18 718 117 HOH HOH . 
J 4 HOH B 19 719 147 HOH HOH . 
J 4 HOH B 20 720 176 HOH HOH . 
J 4 HOH B 21 721 92 HOH HOH . 
J 4 HOH B 22 722 38 HOH HOH . 
J 4 HOH B 23 723 101 HOH HOH . 
J 4 HOH B 24 724 168 HOH HOH . 
J 4 HOH B 25 725 35 HOH HOH . 
J 4 HOH B 26 726 61 HOH HOH . 
J 4 HOH B 27 727 30 HOH HOH . 
J 4 HOH B 28 728 100 HOH HOH . 
J 4 HOH B 29 729 142 HOH HOH . 
J 4 HOH B 30 730 177 HOH HOH . 
J 4 HOH B 31 731 178 HOH HOH . 
J 4 HOH B 32 732 121 HOH HOH . 
J 4 HOH B 33 733 21 HOH HOH . 
J 4 HOH B 34 734 160 HOH HOH . 
J 4 HOH B 35 735 140 HOH HOH . 
J 4 HOH B 36 736 7 HOH HOH . 
J 4 HOH B 37 737 166 HOH HOH . 
J 4 HOH B 38 738 132 HOH HOH . 
J 4 HOH B 39 739 75 HOH HOH . 
J 4 HOH B 40 740 162 HOH HOH . 
J 4 HOH B 41 741 130 HOH HOH . 
J 4 HOH B 42 742 180 HOH HOH . 
J 4 HOH B 43 743 80 HOH HOH . 
J 4 HOH B 44 744 138 HOH HOH . 
K 4 HOH C 1 801 171 HOH HOH . 
K 4 HOH C 2 802 145 HOH HOH . 
K 4 HOH C 3 803 107 HOH HOH . 
K 4 HOH C 4 804 14 HOH HOH . 
K 4 HOH C 5 805 158 HOH HOH . 
K 4 HOH C 6 806 72 HOH HOH . 
K 4 HOH C 7 807 32 HOH HOH . 
K 4 HOH C 8 808 19 HOH HOH . 
K 4 HOH C 9 809 55 HOH HOH . 
K 4 HOH C 10 810 2 HOH HOH . 
K 4 HOH C 11 811 8 HOH HOH . 
K 4 HOH C 12 812 165 HOH HOH . 
K 4 HOH C 13 813 105 HOH HOH . 
K 4 HOH C 14 814 23 HOH HOH . 
K 4 HOH C 15 815 118 HOH HOH . 
K 4 HOH C 16 816 112 HOH HOH . 
K 4 HOH C 17 817 70 HOH HOH . 
K 4 HOH C 18 818 59 HOH HOH . 
K 4 HOH C 19 819 161 HOH HOH . 
K 4 HOH C 20 820 163 HOH HOH . 
K 4 HOH C 21 821 40 HOH HOH . 
K 4 HOH C 22 822 120 HOH HOH . 
K 4 HOH C 23 823 34 HOH HOH . 
K 4 HOH C 24 824 71 HOH HOH . 
K 4 HOH C 25 825 90 HOH HOH . 
K 4 HOH C 26 826 28 HOH HOH . 
K 4 HOH C 27 827 148 HOH HOH . 
K 4 HOH C 28 828 102 HOH HOH . 
K 4 HOH C 29 829 139 HOH HOH . 
K 4 HOH C 30 830 109 HOH HOH . 
K 4 HOH C 31 831 63 HOH HOH . 
K 4 HOH C 32 832 115 HOH HOH . 
K 4 HOH C 33 833 129 HOH HOH . 
K 4 HOH C 34 834 82 HOH HOH . 
K 4 HOH C 35 835 79 HOH HOH . 
K 4 HOH C 36 836 89 HOH HOH . 
K 4 HOH C 37 837 29 HOH HOH . 
K 4 HOH C 38 838 134 HOH HOH . 
K 4 HOH C 39 839 137 HOH HOH . 
K 4 HOH C 40 840 103 HOH HOH . 
K 4 HOH C 41 841 84 HOH HOH . 
L 4 HOH D 1 701 127 HOH HOH . 
L 4 HOH D 2 702 106 HOH HOH . 
L 4 HOH D 3 703 66 HOH HOH . 
L 4 HOH D 4 704 146 HOH HOH . 
L 4 HOH D 5 705 175 HOH HOH . 
L 4 HOH D 6 706 12 HOH HOH . 
L 4 HOH D 7 707 91 HOH HOH . 
L 4 HOH D 8 708 69 HOH HOH . 
L 4 HOH D 9 709 143 HOH HOH . 
L 4 HOH D 10 710 54 HOH HOH . 
L 4 HOH D 11 711 114 HOH HOH . 
L 4 HOH D 12 712 144 HOH HOH . 
L 4 HOH D 13 713 16 HOH HOH . 
L 4 HOH D 14 714 52 HOH HOH . 
L 4 HOH D 15 715 104 HOH HOH . 
L 4 HOH D 16 716 128 HOH HOH . 
L 4 HOH D 17 717 125 HOH HOH . 
L 4 HOH D 18 718 5 HOH HOH . 
L 4 HOH D 19 719 13 HOH HOH . 
L 4 HOH D 20 720 113 HOH HOH . 
L 4 HOH D 21 721 170 HOH HOH . 
L 4 HOH D 22 722 97 HOH HOH . 
L 4 HOH D 23 723 96 HOH HOH . 
L 4 HOH D 24 724 1 HOH HOH . 
L 4 HOH D 25 725 60 HOH HOH . 
L 4 HOH D 26 726 136 HOH HOH . 
L 4 HOH D 27 727 57 HOH HOH . 
L 4 HOH D 28 728 47 HOH HOH . 
L 4 HOH D 29 729 174 HOH HOH . 
L 4 HOH D 30 730 77 HOH HOH . 
L 4 HOH D 31 731 87 HOH HOH . 
L 4 HOH D 32 732 3 HOH HOH . 
L 4 HOH D 33 733 86 HOH HOH . 
L 4 HOH D 34 734 31 HOH HOH . 
L 4 HOH D 35 735 44 HOH HOH . 
L 4 HOH D 36 736 157 HOH HOH . 
L 4 HOH D 37 737 126 HOH HOH . 
L 4 HOH D 38 738 27 HOH HOH . 
L 4 HOH D 39 739 98 HOH HOH . 
L 4 HOH D 40 740 141 HOH HOH . 
L 4 HOH D 41 741 9 HOH HOH . 
L 4 HOH D 42 742 135 HOH HOH . 
L 4 HOH D 43 743 56 HOH HOH . 
L 4 HOH D 44 744 123 HOH HOH . 
L 4 HOH D 45 745 181 HOH HOH . 
L 4 HOH D 46 746 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GCU . . . H 3 19.331 4.87 15.363 1 54.9 ? C1 GCU 702 C 1 
HETATM 2 C C2 GCU . . . H 3 18.714 3.807 16.267 1 56.73 ? C2 GCU 702 C 1 
HETATM 3 C C3 GCU . . . H 3 17.377 3.334 15.715 1 42.4 ? C3 GCU 702 C 1 
HETATM 4 C C4 GCU . . . H 3 17.455 3.039 14.241 1 28.36 ? C4 GCU 702 C 1 
HETATM 5 C C5 GCU . . . H 3 18.03 4.213 13.493 1 33.94 ? C5 GCU 702 C 1 
HETATM 6 C C6 GCU . . . H 3 17.14 5.423 13.618 1 36.69 ? C6 GCU 702 C 1 
HETATM 7 O O2 GCU . . . H 3 19.582 2.722 16.36 1 29.62 ? O2 GCU 702 C 1 
HETATM 8 O O3 GCU . . . H 3 16.387 4.311 15.965 1 51.2 ? O3 GCU 702 C 1 
HETATM 9 O O4 GCU . . . H 3 18.278 1.897 14.032 1 50.76 ? O4 GCU 702 C 1 
HETATM 10 O O5 GCU . . . H 3 19.341 4.367 14.044 1 40.11 ? O5 GCU 702 C 1 
HETATM 11 O O6A GCU . . . H 3 15.903 5.292 13.567 1 56.16 -1 O6A GCU 702 C 1 
HETATM 12 O O6B GCU . . . H 3 17.647 6.567 13.774 1 56.68 ? O6B GCU 702 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#