data_5C82 # _model_server_result.job_id ySSMa_N050nHD-0Dswl7jg _model_server_result.datetime_utc '2024-11-08 12:49:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c82 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5C82 # _exptl.entry_id 5C82 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.67 _cell.angle_gamma 90 _cell.entry_id 5C82 _cell.length_a 96.536 _cell.length_b 44.641 _cell.length_c 42.244 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C82 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 96.536 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 126 A LEU 126 1_555 A N MSE 127 A MSE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale2 A C MSE 127 A MSE 127 1_555 A N GLY 128 A GLY 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C ARG 159 A ARG 159 1_555 A N MSE 160 A MSE 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 160 A MSE 160 1_555 A N GLY 161 A GLY 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale5 A C TYR 184 A TYR 184 1_555 A N MSE 185 A MSE 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale6 A C MSE 185 A MSE 185 1_555 A N SER 186 A SER 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale7 A C SER 186 A SER 186 1_555 A N MSE 187 A MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 A C MSE 187 A MSE 187 1_555 A N PRO 188 A PRO 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 309 n n O11 C1 TAR sing 310 n n O11 HO1 TAR sing 311 n n C1 C2 TAR sing 312 n n C2 O2 TAR sing 313 n n C2 C3 TAR sing 314 n n C2 H2 TAR sing 315 n n O2 HO2 TAR sing 316 n n C3 O3 TAR sing 317 n n C3 C4 TAR sing 318 n n C3 H3 TAR sing 319 n n O3 HO3 TAR sing 320 n n C4 O4 TAR doub 321 n n C4 O41 TAR sing 322 n n O41 HO4 TAR sing 323 n n # _atom_sites.entry_id 5C82 _atom_sites.fract_transf_matrix[1][1] 0.010359 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001395 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022401 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TAR A 1 201 0 TAR TAR . C 3 HOH A 1 301 93 HOH HOH . C 3 HOH A 2 302 97 HOH HOH . C 3 HOH A 3 303 94 HOH HOH . C 3 HOH A 4 304 36 HOH HOH . C 3 HOH A 5 305 2 HOH HOH . C 3 HOH A 6 306 95 HOH HOH . C 3 HOH A 7 307 73 HOH HOH . C 3 HOH A 8 308 22 HOH HOH . C 3 HOH A 9 309 92 HOH HOH . C 3 HOH A 10 310 74 HOH HOH . C 3 HOH A 11 311 75 HOH HOH . C 3 HOH A 12 312 20 HOH HOH . C 3 HOH A 13 313 12 HOH HOH . C 3 HOH A 14 314 5 HOH HOH . C 3 HOH A 15 315 23 HOH HOH . C 3 HOH A 16 316 25 HOH HOH . C 3 HOH A 17 317 39 HOH HOH . C 3 HOH A 18 318 59 HOH HOH . C 3 HOH A 19 319 45 HOH HOH . C 3 HOH A 20 320 52 HOH HOH . C 3 HOH A 21 321 53 HOH HOH . C 3 HOH A 22 322 3 HOH HOH . C 3 HOH A 23 323 72 HOH HOH . C 3 HOH A 24 324 50 HOH HOH . C 3 HOH A 25 325 85 HOH HOH . C 3 HOH A 26 326 10 HOH HOH . C 3 HOH A 27 327 64 HOH HOH . C 3 HOH A 28 328 89 HOH HOH . C 3 HOH A 29 329 77 HOH HOH . C 3 HOH A 30 330 96 HOH HOH . C 3 HOH A 31 331 1 HOH HOH . C 3 HOH A 32 332 42 HOH HOH . C 3 HOH A 33 333 48 HOH HOH . C 3 HOH A 34 334 16 HOH HOH . C 3 HOH A 35 335 6 HOH HOH . C 3 HOH A 36 336 79 HOH HOH . C 3 HOH A 37 337 37 HOH HOH . C 3 HOH A 38 338 65 HOH HOH . C 3 HOH A 39 339 67 HOH HOH . C 3 HOH A 40 340 19 HOH HOH . C 3 HOH A 41 341 28 HOH HOH . C 3 HOH A 42 342 27 HOH HOH . C 3 HOH A 43 343 71 HOH HOH . C 3 HOH A 44 344 21 HOH HOH . C 3 HOH A 45 345 58 HOH HOH . C 3 HOH A 46 346 14 HOH HOH . C 3 HOH A 47 347 84 HOH HOH . C 3 HOH A 48 348 34 HOH HOH . C 3 HOH A 49 349 9 HOH HOH . C 3 HOH A 50 350 31 HOH HOH . C 3 HOH A 51 351 76 HOH HOH . C 3 HOH A 52 352 51 HOH HOH . C 3 HOH A 53 353 26 HOH HOH . C 3 HOH A 54 354 70 HOH HOH . C 3 HOH A 55 355 7 HOH HOH . C 3 HOH A 56 356 46 HOH HOH . C 3 HOH A 57 357 78 HOH HOH . C 3 HOH A 58 358 8 HOH HOH . C 3 HOH A 59 359 17 HOH HOH . C 3 HOH A 60 360 83 HOH HOH . C 3 HOH A 61 361 38 HOH HOH . C 3 HOH A 62 362 80 HOH HOH . C 3 HOH A 63 363 32 HOH HOH . C 3 HOH A 64 364 62 HOH HOH . C 3 HOH A 65 365 24 HOH HOH . C 3 HOH A 66 366 55 HOH HOH . C 3 HOH A 67 367 56 HOH HOH . C 3 HOH A 68 368 40 HOH HOH . C 3 HOH A 69 369 47 HOH HOH . C 3 HOH A 70 370 87 HOH HOH . C 3 HOH A 71 371 4 HOH HOH . C 3 HOH A 72 372 81 HOH HOH . C 3 HOH A 73 373 90 HOH HOH . C 3 HOH A 74 374 11 HOH HOH . C 3 HOH A 75 375 63 HOH HOH . C 3 HOH A 76 376 33 HOH HOH . C 3 HOH A 77 377 43 HOH HOH . C 3 HOH A 78 378 29 HOH HOH . C 3 HOH A 79 379 49 HOH HOH . C 3 HOH A 80 380 41 HOH HOH . C 3 HOH A 81 381 54 HOH HOH . C 3 HOH A 82 382 30 HOH HOH . C 3 HOH A 83 383 91 HOH HOH . C 3 HOH A 84 384 86 HOH HOH . C 3 HOH A 85 385 60 HOH HOH . C 3 HOH A 86 386 82 HOH HOH . C 3 HOH A 87 387 44 HOH HOH . C 3 HOH A 88 388 88 HOH HOH . C 3 HOH A 89 389 69 HOH HOH . C 3 HOH A 90 390 15 HOH HOH . C 3 HOH A 91 391 35 HOH HOH . C 3 HOH A 92 392 66 HOH HOH . C 3 HOH A 93 393 57 HOH HOH . C 3 HOH A 94 394 13 HOH HOH . C 3 HOH A 95 395 61 HOH HOH . C 3 HOH A 96 396 18 HOH HOH . C 3 HOH A 97 397 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . B 2 31.587 13.707 8.465 1 91.78 ? O1 TAR 201 A 1 HETATM 2 O O11 TAR . . . B 2 32.36 11.728 9.061 1 91.23 ? O11 TAR 201 A 1 HETATM 3 C C1 TAR . . . B 2 31.558 12.5 8.397 1 90.8 ? C1 TAR 201 A 1 HETATM 4 C C2 TAR . . . B 2 30.588 11.753 7.486 1 90 ? C2 TAR 201 A 1 HETATM 5 O O2 TAR . . . B 2 30.77 10.349 7.52 1 89.75 ? O2 TAR 201 A 1 HETATM 6 C C3 TAR . . . B 2 29.139 12.137 7.797 1 90.23 ? C3 TAR 201 A 1 HETATM 7 O O3 TAR . . . B 2 29.018 13.545 7.763 1 90.1 ? O3 TAR 201 A 1 HETATM 8 C C4 TAR . . . B 2 28.722 11.575 9.152 1 91.65 ? C4 TAR 201 A 1 HETATM 9 O O4 TAR . . . B 2 28.739 10.277 9.219 1 91.97 ? O4 TAR 201 A 1 HETATM 10 O O41 TAR . . . B 2 28.451 12.297 10.089 1 92.49 ? O41 TAR 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #