data_5C84 # _model_server_result.job_id u8NnnEQ6J4xm0dZU-TI_yw _model_server_result.datetime_utc '2025-07-03 17:36:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c84 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5C84 # _exptl.entry_id 5C84 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C84 _cell.length_a 71.012 _cell.length_b 71.012 _cell.length_c 105.942 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C84 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 56 A CYS 300 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 A SG CYS 59 A CYS 303 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 A NE2 HIS 76 A HIS 320 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc4 A SG CYS 83 A CYS 327 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5C84 _atom_sites.fract_transf_matrix[1][1] 0.014082 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014082 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009439 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 3 4YL A 1 402 1 4YL L01 . D 4 HOH A 1 501 82 HOH HOH . D 4 HOH A 2 502 78 HOH HOH . D 4 HOH A 3 503 1 HOH HOH . D 4 HOH A 4 504 104 HOH HOH . D 4 HOH A 5 505 6 HOH HOH . D 4 HOH A 6 506 60 HOH HOH . D 4 HOH A 7 507 22 HOH HOH . D 4 HOH A 8 508 33 HOH HOH . D 4 HOH A 9 509 58 HOH HOH . D 4 HOH A 10 510 41 HOH HOH . D 4 HOH A 11 511 12 HOH HOH . D 4 HOH A 12 512 43 HOH HOH . D 4 HOH A 13 513 44 HOH HOH . D 4 HOH A 14 514 7 HOH HOH . D 4 HOH A 15 515 31 HOH HOH . D 4 HOH A 16 516 45 HOH HOH . D 4 HOH A 17 517 2 HOH HOH . D 4 HOH A 18 518 39 HOH HOH . D 4 HOH A 19 519 28 HOH HOH . D 4 HOH A 20 520 10 HOH HOH . D 4 HOH A 21 521 16 HOH HOH . D 4 HOH A 22 522 9 HOH HOH . D 4 HOH A 23 523 35 HOH HOH . D 4 HOH A 24 524 112 HOH HOH . D 4 HOH A 25 525 23 HOH HOH . D 4 HOH A 26 526 51 HOH HOH . D 4 HOH A 27 527 27 HOH HOH . D 4 HOH A 28 528 134 HOH HOH . D 4 HOH A 29 529 15 HOH HOH . D 4 HOH A 30 530 57 HOH HOH . D 4 HOH A 31 531 26 HOH HOH . D 4 HOH A 32 532 3 HOH HOH . D 4 HOH A 33 533 52 HOH HOH . D 4 HOH A 34 534 14 HOH HOH . D 4 HOH A 35 535 145 HOH HOH . D 4 HOH A 36 536 59 HOH HOH . D 4 HOH A 37 537 36 HOH HOH . D 4 HOH A 38 538 148 HOH HOH . D 4 HOH A 39 539 77 HOH HOH . D 4 HOH A 40 540 29 HOH HOH . D 4 HOH A 41 541 132 HOH HOH . D 4 HOH A 42 542 102 HOH HOH . D 4 HOH A 43 543 49 HOH HOH . D 4 HOH A 44 544 91 HOH HOH . D 4 HOH A 45 545 20 HOH HOH . D 4 HOH A 46 546 25 HOH HOH . D 4 HOH A 47 547 105 HOH HOH . D 4 HOH A 48 548 40 HOH HOH . D 4 HOH A 49 549 64 HOH HOH . D 4 HOH A 50 550 50 HOH HOH . D 4 HOH A 51 551 129 HOH HOH . D 4 HOH A 52 552 65 HOH HOH . D 4 HOH A 53 553 13 HOH HOH . D 4 HOH A 54 554 38 HOH HOH . D 4 HOH A 55 555 34 HOH HOH . D 4 HOH A 56 556 4 HOH HOH . D 4 HOH A 57 557 84 HOH HOH . D 4 HOH A 58 558 124 HOH HOH . D 4 HOH A 59 559 119 HOH HOH . D 4 HOH A 60 560 138 HOH HOH . D 4 HOH A 61 561 106 HOH HOH . D 4 HOH A 62 562 103 HOH HOH . D 4 HOH A 63 563 8 HOH HOH . D 4 HOH A 64 564 70 HOH HOH . D 4 HOH A 65 565 83 HOH HOH . D 4 HOH A 66 566 86 HOH HOH . D 4 HOH A 67 567 17 HOH HOH . D 4 HOH A 68 568 141 HOH HOH . D 4 HOH A 69 569 94 HOH HOH . D 4 HOH A 70 570 96 HOH HOH . D 4 HOH A 71 571 125 HOH HOH . D 4 HOH A 72 572 47 HOH HOH . D 4 HOH A 73 573 123 HOH HOH . D 4 HOH A 74 574 128 HOH HOH . D 4 HOH A 75 575 21 HOH HOH . D 4 HOH A 76 576 11 HOH HOH . D 4 HOH A 77 577 42 HOH HOH . D 4 HOH A 78 578 55 HOH HOH . D 4 HOH A 79 579 62 HOH HOH . D 4 HOH A 80 580 53 HOH HOH . D 4 HOH A 81 581 30 HOH HOH . D 4 HOH A 82 582 80 HOH HOH . D 4 HOH A 83 583 126 HOH HOH . D 4 HOH A 84 584 89 HOH HOH . D 4 HOH A 85 585 135 HOH HOH . D 4 HOH A 86 586 144 HOH HOH . D 4 HOH A 87 587 92 HOH HOH . D 4 HOH A 88 588 108 HOH HOH . D 4 HOH A 89 589 48 HOH HOH . D 4 HOH A 90 590 5 HOH HOH . D 4 HOH A 91 591 24 HOH HOH . D 4 HOH A 92 592 107 HOH HOH . D 4 HOH A 93 593 81 HOH HOH . D 4 HOH A 94 594 97 HOH HOH . D 4 HOH A 95 595 79 HOH HOH . D 4 HOH A 96 596 127 HOH HOH . D 4 HOH A 97 597 147 HOH HOH . D 4 HOH A 98 598 18 HOH HOH . D 4 HOH A 99 599 46 HOH HOH . D 4 HOH A 100 600 72 HOH HOH . D 4 HOH A 101 601 37 HOH HOH . D 4 HOH A 102 602 149 HOH HOH . D 4 HOH A 103 603 66 HOH HOH . D 4 HOH A 104 604 75 HOH HOH . D 4 HOH A 105 605 71 HOH HOH . D 4 HOH A 106 606 150 HOH HOH . D 4 HOH A 107 607 122 HOH HOH . D 4 HOH A 108 608 113 HOH HOH . D 4 HOH A 109 609 142 HOH HOH . D 4 HOH A 110 610 54 HOH HOH . D 4 HOH A 111 611 100 HOH HOH . D 4 HOH A 112 612 121 HOH HOH . D 4 HOH A 113 613 69 HOH HOH . D 4 HOH A 114 614 19 HOH HOH . D 4 HOH A 115 615 93 HOH HOH . D 4 HOH A 116 616 63 HOH HOH . D 4 HOH A 117 617 115 HOH HOH . D 4 HOH A 118 618 61 HOH HOH . D 4 HOH A 119 619 137 HOH HOH . D 4 HOH A 120 620 68 HOH HOH . D 4 HOH A 121 621 87 HOH HOH . D 4 HOH A 122 622 110 HOH HOH . D 4 HOH A 123 623 56 HOH HOH . D 4 HOH A 124 624 88 HOH HOH . D 4 HOH A 125 625 146 HOH HOH . D 4 HOH A 126 626 32 HOH HOH . D 4 HOH A 127 627 111 HOH HOH . D 4 HOH A 128 628 114 HOH HOH . D 4 HOH A 129 629 99 HOH HOH . D 4 HOH A 130 630 120 HOH HOH . D 4 HOH A 131 631 139 HOH HOH . D 4 HOH A 132 632 67 HOH HOH . D 4 HOH A 133 633 85 HOH HOH . D 4 HOH A 134 634 109 HOH HOH . D 4 HOH A 135 635 117 HOH HOH . D 4 HOH A 136 636 73 HOH HOH . D 4 HOH A 137 637 143 HOH HOH . D 4 HOH A 138 638 90 HOH HOH . D 4 HOH A 139 639 95 HOH HOH . D 4 HOH A 140 640 98 HOH HOH . D 4 HOH A 141 641 118 HOH HOH . D 4 HOH A 142 642 74 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -18.475 _atom_site.Cartn_y -30.906 _atom_site.Cartn_z -9.454 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #