data_5C91 # _model_server_result.job_id xOoy319idwMre9FEXTxQPA _model_server_result.datetime_utc '2024-12-03 17:29:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c91 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 5C91 # _exptl.entry_id 5C91 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 316.352 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl (2E)-4-{[(5-methoxy-1,2-dimethyl-1H-indol-3-yl)carbonyl]amino}but-2-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.13 _cell.angle_gamma 90 _cell.entry_id 5C91 _cell.length_a 175.2 _cell.length_b 38.73 _cell.length_c 60.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C91 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 109 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 627 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C3 _struct_conn.ptnr2_label_comp_id 4YU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 4YU _struct_conn.ptnr2_auth_seq_id 901 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.759 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C17 H20 N2 O4' _chem_comp.formula_weight 316.352 _chem_comp.id 4YU _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl (2E)-4-{[(5-methoxy-1,2-dimethyl-1H-indol-3-yl)carbonyl]amino}but-2-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 N1 4YU sing 1 n n C8 C7 4YU sing 2 n n N1 C7 4YU sing 3 n y N1 C10 4YU sing 4 n y C7 C6 4YU doub 5 n y C10 C11 4YU doub 6 n y C10 C16 4YU sing 7 n y C11 C12 4YU sing 8 n y O2 C5 4YU doub 9 n n C6 C16 4YU sing 10 n y C6 C5 4YU sing 11 n n C16 C15 4YU doub 12 n y C12 C13 4YU doub 13 n y C5 N 4YU sing 14 n n C15 C13 4YU sing 15 n y C13 O3 4YU sing 16 n n N C4 4YU sing 17 n n O3 C14 4YU sing 18 n n C4 C3 4YU sing 19 n n C3 C2 4YU doub 20 e n C2 C1 4YU sing 21 n n C1 O1 4YU doub 22 n n C1 O 4YU sing 23 n n O C 4YU sing 24 n n C4 H1 4YU sing 25 n n C4 H2 4YU sing 26 n n C8 H3 4YU sing 27 n n C8 H4 4YU sing 28 n n C8 H5 4YU sing 29 n n C9 H6 4YU sing 30 n n C9 H7 4YU sing 31 n n C9 H8 4YU sing 32 n n C11 H9 4YU sing 33 n n C12 H10 4YU sing 34 n n C14 H11 4YU sing 35 n n C14 H12 4YU sing 36 n n C14 H13 4YU sing 37 n n C15 H14 4YU sing 38 n n C H15 4YU sing 39 n n C H16 4YU sing 40 n n C H17 4YU sing 41 n n C2 H18 4YU sing 42 n n C3 H20 4YU sing 43 n n N H22 4YU sing 44 n n # _atom_sites.entry_id 5C91 _atom_sites.fract_transf_matrix[1][1] 0.005708 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000312 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016592 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4YU A 1 901 1 4YU XXX . C 3 HOH A 1 1001 5 HOH HOH . C 3 HOH A 2 1002 3 HOH HOH . C 3 HOH A 3 1003 4 HOH HOH . C 3 HOH A 4 1004 1 HOH HOH . C 3 HOH A 5 1005 2 HOH HOH . C 3 HOH A 6 1006 7 HOH HOH . C 3 HOH A 7 1007 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 4YU . . . B 2 -36.988 3.434 -4.493 1 59.06 ? O3 4YU 901 A 1 HETATM 2 C C4 4YU . . . B 2 -36.106 9.852 -4.228 1 61.67 ? C4 4YU 901 A 1 HETATM 3 C C5 4YU . . . B 2 -35.521 8.553 -6.243 1 62.94 ? C5 4YU 901 A 1 HETATM 4 C C6 4YU . . . B 2 -35.046 7.305 -6.937 1 63.91 ? C6 4YU 901 A 1 HETATM 5 N N1 4YU . . . B 2 -33.983 5.953 -8.393 1 63.41 ? N1 4YU 901 A 1 HETATM 6 C C7 4YU . . . B 2 -34.154 7.257 -8.117 1 63.11 ? C7 4YU 901 A 1 HETATM 7 C C8 4YU . . . B 2 -33.566 8.434 -8.851 1 63.92 ? C8 4YU 901 A 1 HETATM 8 C C9 4YU . . . B 2 -33.156 5.431 -9.518 1 64.76 ? C9 4YU 901 A 1 HETATM 9 C C10 4YU . . . B 2 -34.671 5.192 -7.509 1 62.81 ? C10 4YU 901 A 1 HETATM 10 C C11 4YU . . . B 2 -34.797 3.808 -7.395 1 61.82 ? C11 4YU 901 A 1 HETATM 11 C C12 4YU . . . B 2 -35.57 3.249 -6.38 1 61.8 ? C12 4YU 901 A 1 HETATM 12 C C13 4YU . . . B 2 -36.234 4.057 -5.46 1 61.34 ? C13 4YU 901 A 1 HETATM 13 C C14 4YU . . . B 2 -37.48 4.067 -3.309 1 57.77 ? C14 4YU 901 A 1 HETATM 14 C C15 4YU . . . B 2 -36.12 5.449 -5.568 1 61.62 ? C15 4YU 901 A 1 HETATM 15 O O1 4YU . . . B 2 -36.111 10.469 -0.55 1 68.66 ? O1 4YU 901 A 1 HETATM 16 C C1 4YU . . . B 2 -37.234 10.514 -1.036 1 67.6 ? C1 4YU 901 A 1 HETATM 17 O O 4YU . . . B 2 -38.387 10.103 -0.236 1 66.18 ? O 4YU 901 A 1 HETATM 18 C C 4YU . . . B 2 -38.364 8.942 0.593 1 64.71 ? C 4YU 901 A 1 HETATM 19 C C2 4YU . . . B 2 -37.448 11.02 -2.452 1 65.95 ? C2 4YU 901 A 1 HETATM 20 C C3 4YU . . . B 2 -37.46 9.912 -3.518 1 62.98 ? C3 4YU 901 A 1 HETATM 21 N N 4YU . . . B 2 -35.699 8.626 -4.913 1 61.73 ? N 4YU 901 A 1 HETATM 22 O O2 4YU . . . B 2 -35.722 9.519 -6.964 1 63.38 ? O2 4YU 901 A 1 HETATM 23 C C16 4YU . . . B 2 -35.342 6 -6.583 1 62.87 ? C16 4YU 901 A 1 # _model_server_stats.io_time_ms 101 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #