data_5C9Z # _model_server_result.job_id o2fLAvq5IeJslxQpG_ARMQ _model_server_result.datetime_utc '2024-11-29 16:19:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5c9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 5C9Z # _exptl.entry_id 5C9Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.483 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(cyclobutylamino)-N-[(2S)-3-(3,4-dihydroisoquinolin-2(1H)-yl)-2-hydroxypropyl]pyridine-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5C9Z _cell.length_a 102.81 _cell.length_b 137.78 _cell.length_c 178.91 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C9Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 216 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 208 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 255 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 247 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.033 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H28 N4 O2' _chem_comp.formula_weight 380.483 _chem_comp.id 4Z2 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(cyclobutylamino)-N-[(2S)-3-(3,4-dihydroisoquinolin-2(1H)-yl)-2-hydroxypropyl]pyridine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF CAE 4Z2 doub 1 n n CAN CAK 4Z2 sing 2 n n CAN CAM 4Z2 sing 3 n n CAH CAG 4Z2 doub 4 n y CAH CAI 4Z2 sing 5 n y CAE CAG 4Z2 sing 6 n n CAE NAD 4Z2 sing 7 n n NAJ CAI 4Z2 sing 8 n n NAJ CAK 4Z2 sing 9 n n CAG CAQ 4Z2 sing 10 n y CAI NAO 4Z2 doub 11 n y CAC NAD 4Z2 sing 12 n n CAC CAB 4Z2 sing 13 n n CAK CAL 4Z2 sing 14 n n OAA CAB 4Z2 sing 15 n n CAR CAB 4Z2 sing 16 n n CAR NAS 4Z2 sing 17 n n CAT CAU 4Z2 sing 18 n n CAT NAS 4Z2 sing 19 n n CAM CAL 4Z2 sing 20 n n CAU CAV 4Z2 sing 21 n n NAS CAX 4Z2 sing 22 n n NAO CAP 4Z2 sing 23 n y CAQ CAP 4Z2 doub 24 n y CAV CBB 4Z2 doub 25 n y CAV CAW 4Z2 sing 26 n y CAX CAW 4Z2 sing 27 n n CBB CBA 4Z2 sing 28 n y CAW CAY 4Z2 doub 29 n y CBA CAZ 4Z2 doub 30 n y CAY CAZ 4Z2 sing 31 n y CAL H1 4Z2 sing 32 n n CAL H2 4Z2 sing 33 n n CAM H3 4Z2 sing 34 n n CAM H4 4Z2 sing 35 n n CAN H5 4Z2 sing 36 n n CAN H6 4Z2 sing 37 n n CAK H7 4Z2 sing 38 n n NAJ H8 4Z2 sing 39 n n CAH H9 4Z2 sing 40 n n CAP H10 4Z2 sing 41 n n CAQ H11 4Z2 sing 42 n n NAD H12 4Z2 sing 43 n n CAC H13 4Z2 sing 44 n n CAC H14 4Z2 sing 45 n n CAB H15 4Z2 sing 46 n n OAA H16 4Z2 sing 47 n n CAR H17 4Z2 sing 48 n n CAR H18 4Z2 sing 49 n n CAT H20 4Z2 sing 50 n n CAT H21 4Z2 sing 51 n n CAU H22 4Z2 sing 52 n n CAU H23 4Z2 sing 53 n n CBB H24 4Z2 sing 54 n n CBA H25 4Z2 sing 55 n n CAZ H26 4Z2 sing 56 n n CAY H27 4Z2 sing 57 n n CAX H28 4Z2 sing 58 n n CAX H29 4Z2 sing 59 n n # _atom_sites.entry_id 5C9Z _atom_sites.fract_transf_matrix[1][1] 0.009727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SFG A 1 701 1 SFG SFG . D 4 4Z2 A 1 702 1 4Z2 EPZ . E 5 GOL A 1 703 1 GOL GOL . F 6 HOH A 1 801 122 HOH HOH . F 6 HOH A 2 802 52 HOH HOH . F 6 HOH A 3 803 78 HOH HOH . F 6 HOH A 4 804 18 HOH HOH . F 6 HOH A 5 805 81 HOH HOH . F 6 HOH A 6 806 7 HOH HOH . F 6 HOH A 7 807 104 HOH HOH . F 6 HOH A 8 808 94 HOH HOH . F 6 HOH A 9 809 76 HOH HOH . F 6 HOH A 10 810 89 HOH HOH . F 6 HOH A 11 811 68 HOH HOH . F 6 HOH A 12 812 93 HOH HOH . F 6 HOH A 13 813 62 HOH HOH . F 6 HOH A 14 814 23 HOH HOH . F 6 HOH A 15 815 32 HOH HOH . F 6 HOH A 16 816 46 HOH HOH . F 6 HOH A 17 817 11 HOH HOH . F 6 HOH A 18 818 21 HOH HOH . F 6 HOH A 19 819 13 HOH HOH . F 6 HOH A 20 820 36 HOH HOH . F 6 HOH A 21 821 30 HOH HOH . F 6 HOH A 22 822 4 HOH HOH . F 6 HOH A 23 823 50 HOH HOH . F 6 HOH A 24 824 3 HOH HOH . F 6 HOH A 25 825 120 HOH HOH . F 6 HOH A 26 826 29 HOH HOH . F 6 HOH A 27 827 2 HOH HOH . F 6 HOH A 28 828 98 HOH HOH . F 6 HOH A 29 829 61 HOH HOH . F 6 HOH A 30 830 64 HOH HOH . F 6 HOH A 31 831 96 HOH HOH . F 6 HOH A 32 832 16 HOH HOH . F 6 HOH A 33 833 67 HOH HOH . F 6 HOH A 34 834 15 HOH HOH . F 6 HOH A 35 835 95 HOH HOH . F 6 HOH A 36 836 59 HOH HOH . F 6 HOH A 37 837 17 HOH HOH . F 6 HOH A 38 838 43 HOH HOH . F 6 HOH A 39 839 65 HOH HOH . F 6 HOH A 40 840 102 HOH HOH . F 6 HOH A 41 841 37 HOH HOH . F 6 HOH A 42 842 41 HOH HOH . F 6 HOH A 43 843 35 HOH HOH . F 6 HOH A 44 844 1 HOH HOH . F 6 HOH A 45 845 101 HOH HOH . F 6 HOH A 46 846 47 HOH HOH . F 6 HOH A 47 847 39 HOH HOH . F 6 HOH A 48 848 40 HOH HOH . F 6 HOH A 49 849 99 HOH HOH . F 6 HOH A 50 850 8 HOH HOH . F 6 HOH A 51 851 25 HOH HOH . F 6 HOH A 52 852 26 HOH HOH . F 6 HOH A 53 853 14 HOH HOH . F 6 HOH A 54 854 54 HOH HOH . F 6 HOH A 55 855 70 HOH HOH . F 6 HOH A 56 856 49 HOH HOH . F 6 HOH A 57 857 103 HOH HOH . F 6 HOH A 58 858 58 HOH HOH . F 6 HOH A 59 859 121 HOH HOH . F 6 HOH A 60 860 118 HOH HOH . F 6 HOH A 61 861 9 HOH HOH . F 6 HOH A 62 862 74 HOH HOH . F 6 HOH A 63 863 79 HOH HOH . F 6 HOH A 64 864 77 HOH HOH . F 6 HOH A 65 865 72 HOH HOH . F 6 HOH A 66 866 22 HOH HOH . F 6 HOH A 67 867 6 HOH HOH . F 6 HOH A 68 868 100 HOH HOH . F 6 HOH A 69 869 12 HOH HOH . F 6 HOH A 70 870 73 HOH HOH . F 6 HOH A 71 871 19 HOH HOH . F 6 HOH A 72 872 60 HOH HOH . F 6 HOH A 73 873 92 HOH HOH . F 6 HOH A 74 874 27 HOH HOH . F 6 HOH A 75 875 105 HOH HOH . F 6 HOH A 76 876 48 HOH HOH . F 6 HOH A 77 877 69 HOH HOH . F 6 HOH A 78 878 119 HOH HOH . F 6 HOH A 79 879 53 HOH HOH . F 6 HOH A 80 880 88 HOH HOH . F 6 HOH A 81 881 45 HOH HOH . F 6 HOH A 82 882 31 HOH HOH . F 6 HOH A 83 883 33 HOH HOH . F 6 HOH A 84 884 123 HOH HOH . F 6 HOH A 85 885 86 HOH HOH . F 6 HOH A 86 886 10 HOH HOH . F 6 HOH A 87 887 80 HOH HOH . F 6 HOH A 88 888 97 HOH HOH . F 6 HOH A 89 889 109 HOH HOH . F 6 HOH A 90 890 87 HOH HOH . F 6 HOH A 91 891 106 HOH HOH . F 6 HOH A 92 892 91 HOH HOH . F 6 HOH A 93 893 85 HOH HOH . F 6 HOH A 94 894 117 HOH HOH . G 6 HOH B 1 401 82 HOH HOH . G 6 HOH B 2 402 44 HOH HOH . G 6 HOH B 3 403 5 HOH HOH . G 6 HOH B 4 404 38 HOH HOH . G 6 HOH B 5 405 110 HOH HOH . G 6 HOH B 6 406 115 HOH HOH . G 6 HOH B 7 407 114 HOH HOH . G 6 HOH B 8 408 57 HOH HOH . G 6 HOH B 9 409 28 HOH HOH . G 6 HOH B 10 410 56 HOH HOH . G 6 HOH B 11 411 20 HOH HOH . G 6 HOH B 12 412 84 HOH HOH . G 6 HOH B 13 413 55 HOH HOH . G 6 HOH B 14 414 42 HOH HOH . G 6 HOH B 15 415 34 HOH HOH . G 6 HOH B 16 416 116 HOH HOH . G 6 HOH B 17 417 75 HOH HOH . G 6 HOH B 18 418 24 HOH HOH . G 6 HOH B 19 419 112 HOH HOH . G 6 HOH B 20 420 63 HOH HOH . G 6 HOH B 21 421 66 HOH HOH . G 6 HOH B 22 422 71 HOH HOH . G 6 HOH B 23 423 107 HOH HOH . G 6 HOH B 24 424 51 HOH HOH . G 6 HOH B 25 425 113 HOH HOH . G 6 HOH B 26 426 90 HOH HOH . G 6 HOH B 27 427 111 HOH HOH . G 6 HOH B 28 428 83 HOH HOH . G 6 HOH B 29 429 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAL 4Z2 . . . D 4 27.507 -50.723 -9.904 1 40.32 ? CAL 4Z2 702 A 1 HETATM 2 C CAM 4Z2 . . . D 4 28.813 -51.27 -10.473 1 40.23 ? CAM 4Z2 702 A 1 HETATM 3 C CAN 4Z2 . . . D 4 28.032 -51.717 -11.701 1 40.22 ? CAN 4Z2 702 A 1 HETATM 4 C CAK 4Z2 . . . D 4 26.773 -51.655 -10.842 1 40.31 ? CAK 4Z2 702 A 1 HETATM 5 N NAJ 4Z2 . . . D 4 25.681 -50.932 -11.521 1 39.33 ? NAJ 4Z2 702 A 1 HETATM 6 C CAI 4Z2 . . . D 4 24.432 -50.975 -11.05 1 39.25 ? CAI 4Z2 702 A 1 HETATM 7 C CAH 4Z2 . . . D 4 23.435 -50.139 -11.566 1 37.73 ? CAH 4Z2 702 A 1 HETATM 8 N NAO 4Z2 . . . D 4 24.143 -51.84 -10.059 1 39.2 ? NAO 4Z2 702 A 1 HETATM 9 C CAP 4Z2 . . . D 4 22.849 -51.93 -9.526 1 38.95 ? CAP 4Z2 702 A 1 HETATM 10 C CAQ 4Z2 . . . D 4 21.846 -51.113 -10.024 1 38.36 ? CAQ 4Z2 702 A 1 HETATM 11 C CAG 4Z2 . . . D 4 22.137 -50.216 -11.054 1 38.66 ? CAG 4Z2 702 A 1 HETATM 12 C CAE 4Z2 . . . D 4 21.129 -49.384 -11.544 1 38.87 ? CAE 4Z2 702 A 1 HETATM 13 O OAF 4Z2 . . . D 4 21.016 -49.152 -12.749 1 38.36 ? OAF 4Z2 702 A 1 HETATM 14 N NAD 4Z2 . . . D 4 20.332 -48.856 -10.596 1 38.13 ? NAD 4Z2 702 A 1 HETATM 15 C CAC 4Z2 . . . D 4 19.245 -47.906 -10.89 1 40.26 ? CAC 4Z2 702 A 1 HETATM 16 C CAB 4Z2 . . . D 4 19.626 -46.536 -10.289 1 41.61 ? CAB 4Z2 702 A 1 HETATM 17 O OAA 4Z2 . . . D 4 18.715 -45.529 -10.731 1 41.73 ? OAA 4Z2 702 A 1 HETATM 18 C CAR 4Z2 . . . D 4 21.058 -46.142 -10.703 1 41.84 ? CAR 4Z2 702 A 1 HETATM 19 N NAS 4Z2 . . . D 4 21.466 -44.81 -10.224 1 43.81 ? NAS 4Z2 702 A 1 HETATM 20 C CAT 4Z2 . . . D 4 22.847 -44.59 -10.688 1 45.57 ? CAT 4Z2 702 A 1 HETATM 21 C CAU 4Z2 . . . D 4 23.363 -43.234 -10.249 1 46.37 ? CAU 4Z2 702 A 1 HETATM 22 C CAV 4Z2 . . . D 4 23.167 -43.068 -8.874 1 47.84 ? CAV 4Z2 702 A 1 HETATM 23 C CBB 4Z2 . . . D 4 23.956 -42.126 -8.206 1 47.36 ? CBB 4Z2 702 A 1 HETATM 24 C CBA 4Z2 . . . D 4 23.803 -41.928 -6.833 1 47.58 ? CBA 4Z2 702 A 1 HETATM 25 C CAZ 4Z2 . . . D 4 22.857 -42.669 -6.119 1 47.23 ? CAZ 4Z2 702 A 1 HETATM 26 C CAY 4Z2 . . . D 4 22.065 -43.609 -6.78 1 46.08 ? CAY 4Z2 702 A 1 HETATM 27 C CAW 4Z2 . . . D 4 22.208 -43.812 -8.153 1 46.07 ? CAW 4Z2 702 A 1 HETATM 28 C CAX 4Z2 . . . D 4 21.394 -44.778 -8.748 1 44.59 ? CAX 4Z2 702 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #