data_5C9Z
#
_model_server_result.job_id            38mDeYHgb3y1bnBaqzPQLQ 
_model_server_result.datetime_utc      '2024-11-26 04:49:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5c9z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":703}' 
#
_entry.id    5C9Z 
#
_exptl.entry_id    5C9Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5C9Z 
_cell.length_a            102.81 
_cell.length_b            137.78 
_cell.length_c            178.91 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5C9Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             216 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              208 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             255 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              247 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.033 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 188 n n 
C1 C2 GOL sing 189 n n 
C1 H11 GOL sing 190 n n 
C1 H12 GOL sing 191 n n 
O1 HO1 GOL sing 192 n n 
C2 O2 GOL sing 193 n n 
C2 C3 GOL sing 194 n n 
C2 H2 GOL sing 195 n n 
O2 HO2 GOL sing 196 n n 
C3 O3 GOL sing 197 n n 
C3 H31 GOL sing 198 n n 
C3 H32 GOL sing 199 n n 
O3 HO3 GOL sing 200 n n 
#
_atom_sites.entry_id                     5C9Z 
_atom_sites.fract_transf_matrix[1][1]    0.009727 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005589 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SFG A 1 701 1 SFG SFG . 
D 4 4Z2 A 1 702 1 4Z2 EPZ . 
E 5 GOL A 1 703 1 GOL GOL . 
F 6 HOH A 1 801 122 HOH HOH . 
F 6 HOH A 2 802 52 HOH HOH . 
F 6 HOH A 3 803 78 HOH HOH . 
F 6 HOH A 4 804 18 HOH HOH . 
F 6 HOH A 5 805 81 HOH HOH . 
F 6 HOH A 6 806 7 HOH HOH . 
F 6 HOH A 7 807 104 HOH HOH . 
F 6 HOH A 8 808 94 HOH HOH . 
F 6 HOH A 9 809 76 HOH HOH . 
F 6 HOH A 10 810 89 HOH HOH . 
F 6 HOH A 11 811 68 HOH HOH . 
F 6 HOH A 12 812 93 HOH HOH . 
F 6 HOH A 13 813 62 HOH HOH . 
F 6 HOH A 14 814 23 HOH HOH . 
F 6 HOH A 15 815 32 HOH HOH . 
F 6 HOH A 16 816 46 HOH HOH . 
F 6 HOH A 17 817 11 HOH HOH . 
F 6 HOH A 18 818 21 HOH HOH . 
F 6 HOH A 19 819 13 HOH HOH . 
F 6 HOH A 20 820 36 HOH HOH . 
F 6 HOH A 21 821 30 HOH HOH . 
F 6 HOH A 22 822 4 HOH HOH . 
F 6 HOH A 23 823 50 HOH HOH . 
F 6 HOH A 24 824 3 HOH HOH . 
F 6 HOH A 25 825 120 HOH HOH . 
F 6 HOH A 26 826 29 HOH HOH . 
F 6 HOH A 27 827 2 HOH HOH . 
F 6 HOH A 28 828 98 HOH HOH . 
F 6 HOH A 29 829 61 HOH HOH . 
F 6 HOH A 30 830 64 HOH HOH . 
F 6 HOH A 31 831 96 HOH HOH . 
F 6 HOH A 32 832 16 HOH HOH . 
F 6 HOH A 33 833 67 HOH HOH . 
F 6 HOH A 34 834 15 HOH HOH . 
F 6 HOH A 35 835 95 HOH HOH . 
F 6 HOH A 36 836 59 HOH HOH . 
F 6 HOH A 37 837 17 HOH HOH . 
F 6 HOH A 38 838 43 HOH HOH . 
F 6 HOH A 39 839 65 HOH HOH . 
F 6 HOH A 40 840 102 HOH HOH . 
F 6 HOH A 41 841 37 HOH HOH . 
F 6 HOH A 42 842 41 HOH HOH . 
F 6 HOH A 43 843 35 HOH HOH . 
F 6 HOH A 44 844 1 HOH HOH . 
F 6 HOH A 45 845 101 HOH HOH . 
F 6 HOH A 46 846 47 HOH HOH . 
F 6 HOH A 47 847 39 HOH HOH . 
F 6 HOH A 48 848 40 HOH HOH . 
F 6 HOH A 49 849 99 HOH HOH . 
F 6 HOH A 50 850 8 HOH HOH . 
F 6 HOH A 51 851 25 HOH HOH . 
F 6 HOH A 52 852 26 HOH HOH . 
F 6 HOH A 53 853 14 HOH HOH . 
F 6 HOH A 54 854 54 HOH HOH . 
F 6 HOH A 55 855 70 HOH HOH . 
F 6 HOH A 56 856 49 HOH HOH . 
F 6 HOH A 57 857 103 HOH HOH . 
F 6 HOH A 58 858 58 HOH HOH . 
F 6 HOH A 59 859 121 HOH HOH . 
F 6 HOH A 60 860 118 HOH HOH . 
F 6 HOH A 61 861 9 HOH HOH . 
F 6 HOH A 62 862 74 HOH HOH . 
F 6 HOH A 63 863 79 HOH HOH . 
F 6 HOH A 64 864 77 HOH HOH . 
F 6 HOH A 65 865 72 HOH HOH . 
F 6 HOH A 66 866 22 HOH HOH . 
F 6 HOH A 67 867 6 HOH HOH . 
F 6 HOH A 68 868 100 HOH HOH . 
F 6 HOH A 69 869 12 HOH HOH . 
F 6 HOH A 70 870 73 HOH HOH . 
F 6 HOH A 71 871 19 HOH HOH . 
F 6 HOH A 72 872 60 HOH HOH . 
F 6 HOH A 73 873 92 HOH HOH . 
F 6 HOH A 74 874 27 HOH HOH . 
F 6 HOH A 75 875 105 HOH HOH . 
F 6 HOH A 76 876 48 HOH HOH . 
F 6 HOH A 77 877 69 HOH HOH . 
F 6 HOH A 78 878 119 HOH HOH . 
F 6 HOH A 79 879 53 HOH HOH . 
F 6 HOH A 80 880 88 HOH HOH . 
F 6 HOH A 81 881 45 HOH HOH . 
F 6 HOH A 82 882 31 HOH HOH . 
F 6 HOH A 83 883 33 HOH HOH . 
F 6 HOH A 84 884 123 HOH HOH . 
F 6 HOH A 85 885 86 HOH HOH . 
F 6 HOH A 86 886 10 HOH HOH . 
F 6 HOH A 87 887 80 HOH HOH . 
F 6 HOH A 88 888 97 HOH HOH . 
F 6 HOH A 89 889 109 HOH HOH . 
F 6 HOH A 90 890 87 HOH HOH . 
F 6 HOH A 91 891 106 HOH HOH . 
F 6 HOH A 92 892 91 HOH HOH . 
F 6 HOH A 93 893 85 HOH HOH . 
F 6 HOH A 94 894 117 HOH HOH . 
G 6 HOH B 1 401 82 HOH HOH . 
G 6 HOH B 2 402 44 HOH HOH . 
G 6 HOH B 3 403 5 HOH HOH . 
G 6 HOH B 4 404 38 HOH HOH . 
G 6 HOH B 5 405 110 HOH HOH . 
G 6 HOH B 6 406 115 HOH HOH . 
G 6 HOH B 7 407 114 HOH HOH . 
G 6 HOH B 8 408 57 HOH HOH . 
G 6 HOH B 9 409 28 HOH HOH . 
G 6 HOH B 10 410 56 HOH HOH . 
G 6 HOH B 11 411 20 HOH HOH . 
G 6 HOH B 12 412 84 HOH HOH . 
G 6 HOH B 13 413 55 HOH HOH . 
G 6 HOH B 14 414 42 HOH HOH . 
G 6 HOH B 15 415 34 HOH HOH . 
G 6 HOH B 16 416 116 HOH HOH . 
G 6 HOH B 17 417 75 HOH HOH . 
G 6 HOH B 18 418 24 HOH HOH . 
G 6 HOH B 19 419 112 HOH HOH . 
G 6 HOH B 20 420 63 HOH HOH . 
G 6 HOH B 21 421 66 HOH HOH . 
G 6 HOH B 22 422 71 HOH HOH . 
G 6 HOH B 23 423 107 HOH HOH . 
G 6 HOH B 24 424 51 HOH HOH . 
G 6 HOH B 25 425 113 HOH HOH . 
G 6 HOH B 26 426 90 HOH HOH . 
G 6 HOH B 27 427 111 HOH HOH . 
G 6 HOH B 28 428 83 HOH HOH . 
G 6 HOH B 29 429 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 5 31.038 -79.71 -14.922 1 60.46 ? C1 GOL 703 A 1 
HETATM 2 O O1 GOL . . . E 5 29.682 -79.291 -14.739 1 59.08 ? O1 GOL 703 A 1 
HETATM 3 C C2 GOL . . . E 5 31.908 -78.993 -13.9 1 62.79 ? C2 GOL 703 A 1 
HETATM 4 O O2 GOL . . . E 5 31.864 -79.726 -12.67 1 63.4 ? O2 GOL 703 A 1 
HETATM 5 C C3 GOL . . . E 5 33.339 -78.9 -14.428 1 63.7 ? C3 GOL 703 A 1 
HETATM 6 O O3 GOL . . . E 5 34.303 -78.947 -13.366 1 66.38 ? O3 GOL 703 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#