data_5CA5
#
_model_server_result.job_id            XL_Ilz2RvBLdoyk_l_JOxw 
_model_server_result.datetime_utc      '2024-12-21 18:39:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ca5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    5CA5 
#
_exptl.entry_id    5CA5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.03 
_cell.angle_gamma         90 
_cell.entry_id            5CA5 
_cell.length_a            60.318 
_cell.length_b            63.115 
_cell.length_c            83.838 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CA5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5CA5 
_atom_sites.fract_transf_matrix[1][1]    0.016579 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003232 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015844 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012152 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 401 1 EDO EDO . 
D 2 EDO A 1 402 2 EDO EDO . 
E 2 EDO B 1 401 3 EDO EDO . 
F 2 EDO B 1 402 4 EDO EDO . 
G 3 HOH A 1 501 41 HOH HOH . 
G 3 HOH A 2 502 64 HOH HOH . 
G 3 HOH A 3 503 6 HOH HOH . 
G 3 HOH A 4 504 15 HOH HOH . 
G 3 HOH A 5 505 109 HOH HOH . 
G 3 HOH A 6 506 70 HOH HOH . 
G 3 HOH A 7 507 88 HOH HOH . 
G 3 HOH A 8 508 11 HOH HOH . 
G 3 HOH A 9 509 4 HOH HOH . 
G 3 HOH A 10 510 65 HOH HOH . 
G 3 HOH A 11 511 21 HOH HOH . 
G 3 HOH A 12 512 5 HOH HOH . 
G 3 HOH A 13 513 131 HOH HOH . 
G 3 HOH A 14 514 13 HOH HOH . 
G 3 HOH A 15 515 3 HOH HOH . 
G 3 HOH A 16 516 93 HOH HOH . 
G 3 HOH A 17 517 193 HOH HOH . 
G 3 HOH A 18 518 114 HOH HOH . 
G 3 HOH A 19 519 1 HOH HOH . 
G 3 HOH A 20 520 163 HOH HOH . 
G 3 HOH A 21 521 127 HOH HOH . 
G 3 HOH A 22 522 75 HOH HOH . 
G 3 HOH A 23 523 55 HOH HOH . 
G 3 HOH A 24 524 2 HOH HOH . 
G 3 HOH A 25 525 133 HOH HOH . 
G 3 HOH A 26 526 189 HOH HOH . 
G 3 HOH A 27 527 18 HOH HOH . 
G 3 HOH A 28 528 149 HOH HOH . 
G 3 HOH A 29 529 36 HOH HOH . 
G 3 HOH A 30 530 85 HOH HOH . 
G 3 HOH A 31 531 142 HOH HOH . 
G 3 HOH A 32 532 9 HOH HOH . 
G 3 HOH A 33 533 161 HOH HOH . 
G 3 HOH A 34 534 94 HOH HOH . 
G 3 HOH A 35 535 167 HOH HOH . 
G 3 HOH A 36 536 134 HOH HOH . 
G 3 HOH A 37 537 116 HOH HOH . 
G 3 HOH A 38 538 12 HOH HOH . 
G 3 HOH A 39 539 164 HOH HOH . 
G 3 HOH A 40 540 72 HOH HOH . 
G 3 HOH A 41 541 125 HOH HOH . 
G 3 HOH A 42 542 40 HOH HOH . 
G 3 HOH A 43 543 10 HOH HOH . 
G 3 HOH A 44 544 25 HOH HOH . 
G 3 HOH A 45 545 97 HOH HOH . 
G 3 HOH A 46 546 95 HOH HOH . 
G 3 HOH A 47 547 111 HOH HOH . 
G 3 HOH A 48 548 188 HOH HOH . 
G 3 HOH A 49 549 137 HOH HOH . 
G 3 HOH A 50 550 38 HOH HOH . 
G 3 HOH A 51 551 187 HOH HOH . 
G 3 HOH A 52 552 87 HOH HOH . 
G 3 HOH A 53 553 44 HOH HOH . 
G 3 HOH A 54 554 37 HOH HOH . 
G 3 HOH A 55 555 71 HOH HOH . 
G 3 HOH A 56 556 22 HOH HOH . 
G 3 HOH A 57 557 42 HOH HOH . 
G 3 HOH A 58 558 165 HOH HOH . 
G 3 HOH A 59 559 7 HOH HOH . 
G 3 HOH A 60 560 107 HOH HOH . 
G 3 HOH A 61 561 51 HOH HOH . 
G 3 HOH A 62 562 130 HOH HOH . 
G 3 HOH A 63 563 117 HOH HOH . 
G 3 HOH A 64 564 136 HOH HOH . 
G 3 HOH A 65 565 135 HOH HOH . 
G 3 HOH A 66 566 172 HOH HOH . 
G 3 HOH A 67 567 199 HOH HOH . 
G 3 HOH A 68 568 148 HOH HOH . 
G 3 HOH A 69 569 47 HOH HOH . 
G 3 HOH A 70 570 194 HOH HOH . 
G 3 HOH A 71 571 77 HOH HOH . 
G 3 HOH A 72 572 73 HOH HOH . 
G 3 HOH A 73 573 33 HOH HOH . 
G 3 HOH A 74 574 80 HOH HOH . 
H 3 HOH B 1 501 177 HOH HOH . 
H 3 HOH B 2 502 76 HOH HOH . 
H 3 HOH B 3 503 168 HOH HOH . 
H 3 HOH B 4 504 169 HOH HOH . 
H 3 HOH B 5 505 19 HOH HOH . 
H 3 HOH B 6 506 30 HOH HOH . 
H 3 HOH B 7 507 56 HOH HOH . 
H 3 HOH B 8 508 63 HOH HOH . 
H 3 HOH B 9 509 82 HOH HOH . 
H 3 HOH B 10 510 17 HOH HOH . 
H 3 HOH B 11 511 129 HOH HOH . 
H 3 HOH B 12 512 24 HOH HOH . 
H 3 HOH B 13 513 191 HOH HOH . 
H 3 HOH B 14 514 182 HOH HOH . 
H 3 HOH B 15 515 103 HOH HOH . 
H 3 HOH B 16 516 101 HOH HOH . 
H 3 HOH B 17 517 20 HOH HOH . 
H 3 HOH B 18 518 146 HOH HOH . 
H 3 HOH B 19 519 119 HOH HOH . 
H 3 HOH B 20 520 96 HOH HOH . 
H 3 HOH B 21 521 104 HOH HOH . 
H 3 HOH B 22 522 105 HOH HOH . 
H 3 HOH B 23 523 121 HOH HOH . 
H 3 HOH B 24 524 143 HOH HOH . 
H 3 HOH B 25 525 27 HOH HOH . 
H 3 HOH B 26 526 8 HOH HOH . 
H 3 HOH B 27 527 98 HOH HOH . 
H 3 HOH B 28 528 151 HOH HOH . 
H 3 HOH B 29 529 78 HOH HOH . 
H 3 HOH B 30 530 58 HOH HOH . 
H 3 HOH B 31 531 196 HOH HOH . 
H 3 HOH B 32 532 83 HOH HOH . 
H 3 HOH B 33 533 126 HOH HOH . 
H 3 HOH B 34 534 185 HOH HOH . 
H 3 HOH B 35 535 31 HOH HOH . 
H 3 HOH B 36 536 106 HOH HOH . 
H 3 HOH B 37 537 14 HOH HOH . 
H 3 HOH B 38 538 120 HOH HOH . 
H 3 HOH B 39 539 32 HOH HOH . 
H 3 HOH B 40 540 166 HOH HOH . 
H 3 HOH B 41 541 110 HOH HOH . 
H 3 HOH B 42 542 171 HOH HOH . 
H 3 HOH B 43 543 91 HOH HOH . 
H 3 HOH B 44 544 170 HOH HOH . 
H 3 HOH B 45 545 157 HOH HOH . 
H 3 HOH B 46 546 57 HOH HOH . 
H 3 HOH B 47 547 60 HOH HOH . 
H 3 HOH B 48 548 192 HOH HOH . 
H 3 HOH B 49 549 50 HOH HOH . 
H 3 HOH B 50 550 174 HOH HOH . 
H 3 HOH B 51 551 124 HOH HOH . 
H 3 HOH B 52 552 23 HOH HOH . 
H 3 HOH B 53 553 183 HOH HOH . 
H 3 HOH B 54 554 26 HOH HOH . 
H 3 HOH B 55 555 145 HOH HOH . 
H 3 HOH B 56 556 198 HOH HOH . 
H 3 HOH B 57 557 153 HOH HOH . 
H 3 HOH B 58 558 176 HOH HOH . 
H 3 HOH B 59 559 190 HOH HOH . 
H 3 HOH B 60 560 39 HOH HOH . 
H 3 HOH B 61 561 197 HOH HOH . 
H 3 HOH B 62 562 150 HOH HOH . 
H 3 HOH B 63 563 45 HOH HOH . 
H 3 HOH B 64 564 175 HOH HOH . 
H 3 HOH B 65 565 184 HOH HOH . 
H 3 HOH B 66 566 29 HOH HOH . 
H 3 HOH B 67 567 147 HOH HOH . 
H 3 HOH B 68 568 54 HOH HOH . 
H 3 HOH B 69 569 195 HOH HOH . 
H 3 HOH B 70 570 178 HOH HOH . 
H 3 HOH B 71 571 48 HOH HOH . 
H 3 HOH B 72 572 52 HOH HOH . 
H 3 HOH B 73 573 35 HOH HOH . 
H 3 HOH B 74 574 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 2 27.268 -9.677 -9.85 1 55.01 ? C1 EDO 402 B 1 
HETATM 2 O O1 EDO . . . F 2 27.143 -10.788 -8.96 1 56.03 ? O1 EDO 402 B 1 
HETATM 3 C C2 EDO . . . F 2 28.751 -9.266 -9.958 1 54.4 ? C2 EDO 402 B 1 
HETATM 4 O O2 EDO . . . F 2 29.563 -10.42 -10.156 1 55.74 ? O2 EDO 402 B 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#