data_5CAL # _model_server_result.job_id N5zanc2s-mngt8q0M69dmA _model_server_result.datetime_utc '2024-12-27 02:25:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cal # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 5CAL # _exptl.entry_id 5CAL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 382.463 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,2-dimethyl-3-[(4-{[2-methyl-1-(propan-2-yl)-1H-imidazo[4,5-c]pyridin-6-yl]amino}pyrimidin-2-yl)amino]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CAL _cell.length_a 145.973 _cell.length_b 145.973 _cell.length_c 145.973 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CAL _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H26 N8 O' _chem_comp.formula_weight 382.463 _chem_comp.id 4Z8 _chem_comp.mon_nstd_flag . _chem_comp.name 2,2-dimethyl-3-[(4-{[2-methyl-1-(propan-2-yl)-1H-imidazo[4,5-c]pyridin-6-yl]amino}pyrimidin-2-yl)amino]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C23 4Z8 sing 1 n n N18 C17 4Z8 doub 2 n y N18 C19 4Z8 sing 3 n y C17 C16 4Z8 sing 4 n y N28 C26 4Z8 sing 5 n n N21 C19 4Z8 sing 6 n n N21 C22 4Z8 sing 7 n n C19 N20 4Z8 doub 8 n y C23 C26 4Z8 sing 9 n n C23 C22 4Z8 sing 10 n n C23 C25 4Z8 sing 11 n n C26 O27 4Z8 doub 12 n n C16 C15 4Z8 doub 13 n y N20 C15 4Z8 sing 14 n y C15 N14 4Z8 sing 15 n n N14 C7 4Z8 sing 16 n n C7 C8 4Z8 doub 17 n y C7 N6 4Z8 sing 18 n y C8 C9 4Z8 sing 19 n y C13 C11 4Z8 sing 20 n n C12 C11 4Z8 sing 21 n n N6 C5 4Z8 doub 22 n y C9 N10 4Z8 sing 23 n y C9 C4 4Z8 doub 24 n y C11 N10 4Z8 sing 25 n n N10 C2 4Z8 sing 26 n y C5 C4 4Z8 sing 27 n y C4 N3 4Z8 sing 28 n y C2 N3 4Z8 doub 29 n y C2 C1 4Z8 sing 30 n n C5 H1 4Z8 sing 31 n n C11 H2 4Z8 sing 32 n n C8 H3 4Z8 sing 33 n n C12 H4 4Z8 sing 34 n n C12 H5 4Z8 sing 35 n n C12 H6 4Z8 sing 36 n n C13 H7 4Z8 sing 37 n n C13 H8 4Z8 sing 38 n n C13 H9 4Z8 sing 39 n n C1 H10 4Z8 sing 40 n n C1 H11 4Z8 sing 41 n n C1 H12 4Z8 sing 42 n n N14 H13 4Z8 sing 43 n n C16 H14 4Z8 sing 44 n n C17 H15 4Z8 sing 45 n n N21 H16 4Z8 sing 46 n n C22 H17 4Z8 sing 47 n n C22 H18 4Z8 sing 48 n n C24 H19 4Z8 sing 49 n n C24 H20 4Z8 sing 50 n n C24 H21 4Z8 sing 51 n n C25 H22 4Z8 sing 52 n n C25 H23 4Z8 sing 53 n n C25 H24 4Z8 sing 54 n n N28 H25 4Z8 sing 55 n n N28 H26 4Z8 sing 56 n n # _atom_sites.entry_id 5CAL _atom_sites.fract_transf_matrix[1][1] 0.006851 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006851 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006851 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 4Z8 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 4Z8 _pdbx_nonpoly_scheme.auth_mon_id DRG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 4Z8 . . . B 2 -52.784 1.537 -19.362 1 58.72 ? C4 4Z8 1101 A 1 HETATM 2 C C5 4Z8 . . . B 2 -53.748 2.497 -19.695 1 57.66 ? C5 4Z8 1101 A 1 HETATM 3 C C11 4Z8 . . . B 2 -50.589 -1.276 -20.325 1 60.36 ? C11 4Z8 1101 A 1 HETATM 4 C C7 4Z8 . . . B 2 -53.873 1.724 -21.893 1 56.57 ? C7 4Z8 1101 A 1 HETATM 5 C C8 4Z8 . . . B 2 -52.893 0.75 -21.651 1 56.92 ? C8 4Z8 1101 A 1 HETATM 6 C C9 4Z8 . . . B 2 -52.336 0.632 -20.364 1 58.74 ? C9 4Z8 1101 A 1 HETATM 7 C C12 4Z8 . . . B 2 -51.43 -2.386 -20.968 1 59.64 ? C12 4Z8 1101 A 1 HETATM 8 C C13 4Z8 . . . B 2 -49.508 -0.745 -21.271 1 60.62 ? C13 4Z8 1101 A 1 HETATM 9 N N3 4Z8 . . . B 2 -52.106 1.247 -18.223 1 59.27 ? N3 4Z8 1101 A 1 HETATM 10 C C1 4Z8 . . . B 2 -50.398 -0.309 -17.357 1 58.08 ? C1 4Z8 1101 A 1 HETATM 11 C C2 4Z8 . . . B 2 -51.296 0.252 -18.433 1 58.75 ? C2 4Z8 1101 A 1 HETATM 12 N N6 4Z8 . . . B 2 -54.256 2.544 -20.914 1 56.74 ? N6 4Z8 1101 A 1 HETATM 13 N N10 4Z8 . . . B 2 -51.391 -0.18 -19.736 1 59.64 ? N10 4Z8 1101 A 1 HETATM 14 N N14 4Z8 . . . B 2 -54.5 1.938 -23.131 1 57.83 ? N14 4Z8 1101 A 1 HETATM 15 C C15 4Z8 . . . B 2 -54.527 1.119 -24.256 1 59.98 ? C15 4Z8 1101 A 1 HETATM 16 C C16 4Z8 . . . B 2 -55.633 1.162 -25.124 1 59.45 ? C16 4Z8 1101 A 1 HETATM 17 C C17 4Z8 . . . B 2 -55.62 0.333 -26.24 1 60.82 ? C17 4Z8 1101 A 1 HETATM 18 N N18 4Z8 . . . B 2 -54.57 -0.465 -26.454 1 62.89 ? N18 4Z8 1101 A 1 HETATM 19 C C19 4Z8 . . . B 2 -53.543 -0.494 -25.607 1 65.12 ? C19 4Z8 1101 A 1 HETATM 20 N N20 4Z8 . . . B 2 -53.51 0.302 -24.55 1 63.47 ? N20 4Z8 1101 A 1 HETATM 21 N N21 4Z8 . . . B 2 -52.441 -1.284 -25.861 1 70.81 ? N21 4Z8 1101 A 1 HETATM 22 C C22 4Z8 . . . B 2 -52.218 -2.552 -25.153 1 75.38 ? C22 4Z8 1101 A 1 HETATM 23 C C23 4Z8 . . . B 2 -50.928 -3.27 -25.605 1 80.84 ? C23 4Z8 1101 A 1 HETATM 24 C C24 4Z8 . . . B 2 -50.737 -3.155 -27.129 1 80.35 ? C24 4Z8 1101 A 1 HETATM 25 C C25 4Z8 . . . B 2 -49.745 -2.601 -24.902 1 81.36 ? C25 4Z8 1101 A 1 HETATM 26 C C26 4Z8 . . . B 2 -50.965 -4.732 -25.181 1 86.07 ? C26 4Z8 1101 A 1 HETATM 27 O O27 4Z8 . . . B 2 -51.446 -5.058 -24.106 1 88.51 ? O27 4Z8 1101 A 1 HETATM 28 N N28 4Z8 . . . B 2 -50.447 -5.708 -25.966 1 87.39 ? N28 4Z8 1101 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #