data_5CAV # _model_server_result.job_id HbNKhn_YyLtpD7TzV2yngw _model_server_result.datetime_utc '2024-11-05 06:57:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5cav # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 5CAV # _exptl.entry_id 5CAV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.463 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R)-1-{6-({2-[(3R,4S)-3-fluoro-4-methoxypiperidin-1-yl]pyrimidin-4-yl}amino)-1-[(2S)-1,1,1-trifluoropropan-2-yl]-1H-imidazo[4,5-c]pyridin-2-yl}ethanol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CAV _cell.length_a 146.31 _cell.length_b 146.31 _cell.length_c 146.31 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CAV _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H25 F4 N7 O2' _chem_comp.formula_weight 483.463 _chem_comp.id 4ZQ _chem_comp.mon_nstd_flag . _chem_comp.name (1R)-1-{6-({2-[(3R,4S)-3-fluoro-4-methoxypiperidin-1-yl]pyrimidin-4-yl}amino)-1-[(2S)-1,1,1-trifluoropropan-2-yl]-1H-imidazo[4,5-c]pyridin-2-yl}ethanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F31 C29 4ZQ sing 1 n n C29 C30 4ZQ sing 2 n n C29 C28 4ZQ sing 3 n n O32 C33 4ZQ sing 4 n n O32 C28 4ZQ sing 5 n n C30 N25 4ZQ sing 6 n n C28 C27 4ZQ sing 7 n n N22 C21 4ZQ doub 8 n y N22 C23 4ZQ sing 9 n y C21 C20 4ZQ sing 10 n y N25 C23 4ZQ sing 11 n n N25 C26 4ZQ sing 12 n n C27 C26 4ZQ sing 13 n n C23 N24 4ZQ doub 14 n y C20 C19 4ZQ doub 15 n y N24 C19 4ZQ sing 16 n y C19 N18 4ZQ sing 17 n n N18 C8 4ZQ sing 18 n n F17 C14 4ZQ sing 19 n n F16 C14 4ZQ sing 20 n n C8 C9 4ZQ doub 21 n y C8 N7 4ZQ sing 22 n y C9 C10 4ZQ sing 23 n y C14 F15 4ZQ sing 24 n n C14 C12 4ZQ sing 25 n n C13 C12 4ZQ sing 26 n n C12 N11 4ZQ sing 27 n n N7 C6 4ZQ doub 28 n y C10 N11 4ZQ sing 29 n y C10 C5 4ZQ doub 30 n y N11 C3 4ZQ sing 31 n y C6 C5 4ZQ sing 32 n y C5 N4 4ZQ sing 33 n y C3 N4 4ZQ doub 34 n y C3 C2 4ZQ sing 35 n n C2 O34 4ZQ sing 36 n n C2 C1 4ZQ sing 37 n n C6 H1 4ZQ sing 38 n n C9 H2 4ZQ sing 39 n n C12 H3 4ZQ sing 40 n n C13 H4 4ZQ sing 41 n n C13 H5 4ZQ sing 42 n n C13 H6 4ZQ sing 43 n n C1 H7 4ZQ sing 44 n n C1 H8 4ZQ sing 45 n n C1 H9 4ZQ sing 46 n n C2 H10 4ZQ sing 47 n n N18 H11 4ZQ sing 48 n n C20 H12 4ZQ sing 49 n n C21 H13 4ZQ sing 50 n n C26 H14 4ZQ sing 51 n n C26 H15 4ZQ sing 52 n n C27 H16 4ZQ sing 53 n n C27 H17 4ZQ sing 54 n n C28 H18 4ZQ sing 55 n n C29 H19 4ZQ sing 56 n n C30 H20 4ZQ sing 57 n n C30 H21 4ZQ sing 58 n n C33 H22 4ZQ sing 59 n n C33 H23 4ZQ sing 60 n n C33 H24 4ZQ sing 61 n n O34 H25 4ZQ sing 62 n n # _atom_sites.entry_id 5CAV _atom_sites.fract_transf_matrix[1][1] 0.006835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4ZQ A 1 1101 1 4ZQ DRG . C 3 HOH A 1 1201 2 HOH HOH . C 3 HOH A 2 1202 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 4ZQ . . . B 2 -49.764 -1.382 -21.529 1 88.67 ? C14 4ZQ 1101 A 1 HETATM 2 C C5 4ZQ . . . B 2 -52.923 0.973 -19.447 1 78.68 ? C5 4ZQ 1101 A 1 HETATM 3 C C6 4ZQ . . . B 2 -53.865 1.977 -19.683 1 76.97 ? C6 4ZQ 1101 A 1 HETATM 4 C C8 4ZQ . . . B 2 -54.144 1.29 -21.89 1 72.8 ? C8 4ZQ 1101 A 1 HETATM 5 C C9 4ZQ . . . B 2 -53.19 0.271 -21.743 1 74 ? C9 4ZQ 1101 A 1 HETATM 6 C C10 4ZQ . . . B 2 -52.558 0.091 -20.499 1 77.77 ? C10 4ZQ 1101 A 1 HETATM 7 C C12 4ZQ . . . B 2 -50.873 -1.89 -20.6 1 85.66 ? C12 4ZQ 1101 A 1 HETATM 8 C C13 4ZQ . . . B 2 -51.782 -2.88 -21.339 1 83.83 ? C13 4ZQ 1101 A 1 HETATM 9 C C3 4ZQ . . . B 2 -51.415 -0.372 -18.644 1 83.15 ? C3 4ZQ 1101 A 1 HETATM 10 C C1 4ZQ . . . B 2 -50.043 -0.017 -16.554 1 86.87 ? C1 4ZQ 1101 A 1 HETATM 11 C C2 4ZQ . . . B 2 -50.468 -1.009 -17.641 1 84.84 ? C2 4ZQ 1101 A 1 HETATM 12 N N4 4ZQ . . . B 2 -52.206 0.624 -18.358 1 81.86 ? N4 4ZQ 1101 A 1 HETATM 13 N N7 4ZQ . . . B 2 -54.432 2.092 -20.868 1 74.27 ? N7 4ZQ 1101 A 1 HETATM 14 N N11 4ZQ . . . B 2 -51.606 -0.771 -19.951 1 82.17 ? N11 4ZQ 1101 A 1 HETATM 15 F F15 4ZQ . . . B 2 -49.011 -0.392 -20.891 1 89.54 ? F15 4ZQ 1101 A 1 HETATM 16 F F16 4ZQ . . . B 2 -48.913 -2.455 -21.822 1 91.42 ? F16 4ZQ 1101 A 1 HETATM 17 F F17 4ZQ . . . B 2 -50.306 -0.857 -22.708 1 88.08 ? F17 4ZQ 1101 A 1 HETATM 18 N N18 4ZQ . . . B 2 -54.82 1.594 -23.079 1 72.22 ? N18 4ZQ 1101 A 1 HETATM 19 C C19 4ZQ . . . B 2 -54.952 0.826 -24.228 1 72.21 ? C19 4ZQ 1101 A 1 HETATM 20 C C20 4ZQ . . . B 2 -56.127 0.937 -24.991 1 71.23 ? C20 4ZQ 1101 A 1 HETATM 21 C C21 4ZQ . . . B 2 -56.247 0.151 -26.129 1 71.43 ? C21 4ZQ 1101 A 1 HETATM 22 N N22 4ZQ . . . B 2 -55.247 -0.66 -26.473 1 71.91 ? N22 4ZQ 1101 A 1 HETATM 23 C C23 4ZQ . . . B 2 -54.142 -0.765 -25.727 1 73.9 ? C23 4ZQ 1101 A 1 HETATM 24 N N24 4ZQ . . . B 2 -53.986 0.003 -24.646 1 73.65 ? N24 4ZQ 1101 A 1 HETATM 25 N N25 4ZQ . . . B 2 -53.105 -1.617 -26.106 1 76.36 ? N25 4ZQ 1101 A 1 HETATM 26 C C26 4ZQ . . . B 2 -52.262 -2.218 -25.055 1 76.88 ? C26 4ZQ 1101 A 1 HETATM 27 C C27 4ZQ . . . B 2 -50.837 -2.307 -25.624 1 78.81 ? C27 4ZQ 1101 A 1 HETATM 28 C C28 4ZQ . . . B 2 -50.848 -3.061 -26.975 1 78.83 ? C28 4ZQ 1101 A 1 HETATM 29 C C29 4ZQ . . . B 2 -51.923 -2.524 -27.954 1 78.35 ? C29 4ZQ 1101 A 1 HETATM 30 C C30 4ZQ . . . B 2 -53.291 -2.494 -27.276 1 76.37 ? C30 4ZQ 1101 A 1 HETATM 31 F F31 4ZQ . . . B 2 -51.642 -1.206 -28.333 1 80.5 ? F31 4ZQ 1101 A 1 HETATM 32 O O32 4ZQ . . . B 2 -49.547 -2.942 -27.576 1 79.06 ? O32 4ZQ 1101 A 1 HETATM 33 C C33 4ZQ . . . B 2 -48.73 -4.119 -27.616 1 79.31 ? C33 4ZQ 1101 A 1 HETATM 34 O O34 4ZQ . . . B 2 -51.115 -2.134 -17.039 1 85.49 ? O34 4ZQ 1101 A 1 HETATM 35 H H3 4ZQ . . . B 2 -50.382 -2.483 -19.833 1 87.24 ? H3 4ZQ 1101 A 1 HETATM 36 H H10 4ZQ . . . B 2 -49.563 -1.344 -18.147 1 85.51 ? H10 4ZQ 1101 A 1 HETATM 37 H H18 4ZQ . . . B 2 -51.078 -4.109 -26.772 1 78.86 ? H18 4ZQ 1101 A 1 HETATM 38 H H19 4ZQ . . . B 2 -51.968 -3.159 -28.839 1 78.45 ? H19 4ZQ 1101 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #