data_5CAX
#
_model_server_result.job_id            z6zQu45KXGa0v3d6tSmzfw 
_model_server_result.datetime_utc      '2025-09-12 08:21:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5cax 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":202}' 
#
_entry.id    5CAX 
#
_exptl.entry_id    5CAX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5CAX 
_cell.length_a            59.154 
_cell.length_b            59.154 
_cell.length_c            172.978 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5CAX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,W 1 1 
B,I,J,K,L,X 2 1 
C,M,N,O,Y 3 1 
D,P,Q,R,S,T,U,V,Z 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 18 A ASP 18 1_555 E CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc2 A SG CYS 30 A CYS 30 1_555 G CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? 
metalc ? metalc3 A SG CYS 33 A CYS 33 1_555 G CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? 
metalc ? metalc4 A OD1 ASP 46 A ASP 46 1_555 F CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
metalc ? metalc5 A O PHE 76 A PHE 76 1_555 G CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? 
metalc ? metalc6 F CD CD . A CD 202 1_555 W O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? 
metalc ? metalc7 W O HOH . A HOH 323 1_555 I CD CD . B CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? 
metalc ? metalc8 B OD2 ASP 18 B ASP 18 1_555 J CD CD . B CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc9 B SG CYS 30 B CYS 30 1_555 K CD CD . B CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? 
metalc ? metalc10 B SG CYS 33 B CYS 33 1_555 K CD CD . B CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? 
metalc ? metalc11 B OD1 ASP 46 B ASP 46 1_555 I CD CD . B CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? 
metalc ? metalc12 X O HOH . B HOH 318 4_464 O CD CD . C CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc13 C OD2 ASP 7 C ASP 7 1_555 Q CD CD . D CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc14 C OD2 ASP 18 C ASP 18 1_555 M CD CD . C CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? 
metalc ? metalc15 C SG CYS 30 C CYS 30 1_555 O CD CD . C CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? 
metalc ? metalc16 C SG CYS 33 C CYS 33 1_555 O CD CD . C CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? 
metalc ? metalc17 C OD1 ASP 46 C ASP 46 1_555 N CD CD . C CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? 
metalc ? metalc18 C O PHE 76 C PHE 76 1_555 O CD CD . C CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
metalc ? metalc19 N CD CD . C CD 202 1_555 Y O HOH . C HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc20 D OD1 ASP 18 D ASP 18 1_555 Q CD CD . D CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc21 D SG CYS 30 D CYS 30 1_555 R CD CD . D CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? 
metalc ? metalc22 D SG CYS 33 D CYS 33 1_555 R CD CD . D CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? 
metalc ? metalc23 D OD1 ASP 46 D ASP 46 1_555 P CD CD . D CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? 
metalc ? metalc24 D OD2 ASP 46 D ASP 46 1_555 P CD CD . D CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? 
metalc ? metalc25 P CD CD . D CD 201 1_555 Z O HOH . D HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc26 P CD CD . D CD 201 1_555 Z O HOH . D HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5CAX 
_atom_sites.fract_transf_matrix[1][1]    0.016905 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016905 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005781 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CD A 1 201 1 CD CD . 
F 2 CD A 1 202 1 CD CD . 
G 2 CD A 1 203 1 CD CD . 
H 3 ACY A 1 204 178 ACY ACY . 
I 2 CD B 1 201 1 CD CD . 
J 2 CD B 1 202 1 CD CD . 
K 2 CD B 1 203 1 CD CD . 
L 4 SO4 B 1 204 2 SO4 SO4 . 
M 2 CD C 1 201 1 CD CD . 
N 2 CD C 1 202 1 CD CD . 
O 2 CD C 1 203 1 CD CD . 
P 2 CD D 1 201 1 CD CD . 
Q 2 CD D 1 202 1 CD CD . 
R 2 CD D 1 203 1 CD CD . 
S 3 ACY D 1 204 175 ACY ACY . 
T 3 ACY D 1 205 176 ACY ACY . 
U 3 ACY D 1 206 177 ACY ACY . 
V 4 SO4 D 1 207 3 SO4 SO4 . 
W 5 HOH A 1 301 22 HOH HOH . 
W 5 HOH A 2 302 62 HOH HOH . 
W 5 HOH A 3 303 8 HOH HOH . 
W 5 HOH A 4 304 21 HOH HOH . 
W 5 HOH A 5 305 75 HOH HOH . 
W 5 HOH A 6 306 27 HOH HOH . 
W 5 HOH A 7 307 76 HOH HOH . 
W 5 HOH A 8 308 23 HOH HOH . 
W 5 HOH A 9 309 24 HOH HOH . 
W 5 HOH A 10 310 33 HOH HOH . 
W 5 HOH A 11 311 71 HOH HOH . 
W 5 HOH A 12 312 83 HOH HOH . 
W 5 HOH A 13 313 51 HOH HOH . 
W 5 HOH A 14 314 28 HOH HOH . 
W 5 HOH A 15 315 89 HOH HOH . 
W 5 HOH A 16 316 40 HOH HOH . 
W 5 HOH A 17 317 15 HOH HOH . 
W 5 HOH A 18 318 5 HOH HOH . 
W 5 HOH A 19 319 90 HOH HOH . 
W 5 HOH A 20 320 98 HOH HOH . 
W 5 HOH A 21 321 88 HOH HOH . 
W 5 HOH A 22 322 60 HOH HOH . 
W 5 HOH A 23 323 12 HOH HOH . 
W 5 HOH A 24 324 74 HOH HOH . 
W 5 HOH A 25 325 25 HOH HOH . 
W 5 HOH A 26 326 65 HOH HOH . 
X 5 HOH B 1 301 44 HOH HOH . 
X 5 HOH B 2 302 45 HOH HOH . 
X 5 HOH B 3 303 99 HOH HOH . 
X 5 HOH B 4 304 53 HOH HOH . 
X 5 HOH B 5 305 14 HOH HOH . 
X 5 HOH B 6 306 50 HOH HOH . 
X 5 HOH B 7 307 58 HOH HOH . 
X 5 HOH B 8 308 19 HOH HOH . 
X 5 HOH B 9 309 26 HOH HOH . 
X 5 HOH B 10 310 72 HOH HOH . 
X 5 HOH B 11 311 16 HOH HOH . 
X 5 HOH B 12 312 81 HOH HOH . 
X 5 HOH B 13 313 17 HOH HOH . 
X 5 HOH B 14 314 35 HOH HOH . 
X 5 HOH B 15 315 92 HOH HOH . 
X 5 HOH B 16 316 31 HOH HOH . 
X 5 HOH B 17 317 64 HOH HOH . 
X 5 HOH B 18 318 30 HOH HOH . 
X 5 HOH B 19 319 66 HOH HOH . 
X 5 HOH B 20 320 73 HOH HOH . 
X 5 HOH B 21 321 85 HOH HOH . 
Y 5 HOH C 1 301 87 HOH HOH . 
Y 5 HOH C 2 302 20 HOH HOH . 
Y 5 HOH C 3 303 39 HOH HOH . 
Y 5 HOH C 4 304 32 HOH HOH . 
Y 5 HOH C 5 305 38 HOH HOH . 
Y 5 HOH C 6 306 56 HOH HOH . 
Y 5 HOH C 7 307 3 HOH HOH . 
Y 5 HOH C 8 308 93 HOH HOH . 
Y 5 HOH C 9 309 13 HOH HOH . 
Y 5 HOH C 10 310 46 HOH HOH . 
Y 5 HOH C 11 311 95 HOH HOH . 
Y 5 HOH C 12 312 6 HOH HOH . 
Y 5 HOH C 13 313 9 HOH HOH . 
Y 5 HOH C 14 314 48 HOH HOH . 
Y 5 HOH C 15 315 18 HOH HOH . 
Y 5 HOH C 16 316 36 HOH HOH . 
Y 5 HOH C 17 317 59 HOH HOH . 
Y 5 HOH C 18 318 34 HOH HOH . 
Y 5 HOH C 19 319 80 HOH HOH . 
Y 5 HOH C 20 320 78 HOH HOH . 
Y 5 HOH C 21 321 10 HOH HOH . 
Y 5 HOH C 22 322 84 HOH HOH . 
Y 5 HOH C 23 323 96 HOH HOH . 
Y 5 HOH C 24 324 97 HOH HOH . 
Z 5 HOH D 1 301 37 HOH HOH . 
Z 5 HOH D 2 302 47 HOH HOH . 
Z 5 HOH D 3 303 42 HOH HOH . 
Z 5 HOH D 4 304 82 HOH HOH . 
Z 5 HOH D 5 305 61 HOH HOH . 
Z 5 HOH D 6 306 7 HOH HOH . 
Z 5 HOH D 7 307 11 HOH HOH . 
Z 5 HOH D 8 308 63 HOH HOH . 
Z 5 HOH D 9 309 29 HOH HOH . 
Z 5 HOH D 10 310 2 HOH HOH . 
Z 5 HOH D 11 311 43 HOH HOH . 
Z 5 HOH D 12 312 1 HOH HOH . 
Z 5 HOH D 13 313 69 HOH HOH . 
Z 5 HOH D 14 314 41 HOH HOH . 
Z 5 HOH D 15 315 49 HOH HOH . 
Z 5 HOH D 16 316 4 HOH HOH . 
Z 5 HOH D 17 317 54 HOH HOH . 
Z 5 HOH D 18 318 94 HOH HOH . 
Z 5 HOH D 19 319 70 HOH HOH . 
Z 5 HOH D 20 320 55 HOH HOH . 
Z 5 HOH D 21 321 68 HOH HOH . 
Z 5 HOH D 22 322 79 HOH HOH . 
Z 5 HOH D 23 323 67 HOH HOH . 
Z 5 HOH D 24 324 52 HOH HOH . 
Z 5 HOH D 25 325 91 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               16.221 
_atom_site.Cartn_y               49.171 
_atom_site.Cartn_z               -8.368 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        50.28 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#