data_5CCN # _model_server_result.job_id P3a9GyGHTLjQf6rhnazeCQ _model_server_result.datetime_utc '2024-11-18 12:02:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ccn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 5CCN # _exptl.entry_id 5CCN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5CCN _cell.length_a 57.45 _cell.length_b 57.45 _cell.length_c 114.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B K K . A K 201 1_555 E O4 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? metalc ? metalc2 B K K . A K 201 1_555 E O1 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.478 ? metalc ? metalc3 B K K . A K 201 1_555 E O2 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc4 B K K . A K 201 1_555 E O3 PGE . A PGE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc5 B K K . A K 201 1_555 E O1 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.478 ? metalc ? metalc6 B K K . A K 201 1_555 E O2 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc7 B K K . A K 201 1_555 E O3 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc8 B K K . A K 201 1_555 E O4 PGE . A PGE 204 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 286 n n C1 C2 PEG sing 287 n n C1 H11 PEG sing 288 n n C1 H12 PEG sing 289 n n O1 HO1 PEG sing 290 n n C2 O2 PEG sing 291 n n C2 H21 PEG sing 292 n n C2 H22 PEG sing 293 n n O2 C3 PEG sing 294 n n C3 C4 PEG sing 295 n n C3 H31 PEG sing 296 n n C3 H32 PEG sing 297 n n C4 O4 PEG sing 298 n n C4 H41 PEG sing 299 n n C4 H42 PEG sing 300 n n O4 HO4 PEG sing 301 n n # _atom_sites.entry_id 5CCN _atom_sites.fract_transf_matrix[1][1] 0.017406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 201 1 K K . C 3 FMT A 1 202 1 FMT FMT . D 4 PG4 A 1 203 1 PG4 PG4 . E 5 PGE A 1 204 1 PGE PGE . F 6 PEG A 1 205 2 PEG PEG . G 7 4ZZ A 1 206 1 4ZZ C23 . H 8 HOH A 1 301 106 HOH HOH . H 8 HOH A 2 302 40 HOH HOH . H 8 HOH A 3 303 52 HOH HOH . H 8 HOH A 4 304 110 HOH HOH . H 8 HOH A 5 305 81 HOH HOH . H 8 HOH A 6 306 58 HOH HOH . H 8 HOH A 7 307 107 HOH HOH . H 8 HOH A 8 308 108 HOH HOH . H 8 HOH A 9 309 1 HOH HOH . H 8 HOH A 10 310 93 HOH HOH . H 8 HOH A 11 311 79 HOH HOH . H 8 HOH A 12 312 61 HOH HOH . H 8 HOH A 13 313 121 HOH HOH . H 8 HOH A 14 314 109 HOH HOH . H 8 HOH A 15 315 78 HOH HOH . H 8 HOH A 16 316 42 HOH HOH . H 8 HOH A 17 317 14 HOH HOH . H 8 HOH A 18 318 19 HOH HOH . H 8 HOH A 19 319 20 HOH HOH . H 8 HOH A 20 320 62 HOH HOH . H 8 HOH A 21 321 69 HOH HOH . H 8 HOH A 22 322 16 HOH HOH . H 8 HOH A 23 323 77 HOH HOH . H 8 HOH A 24 324 71 HOH HOH . H 8 HOH A 25 325 12 HOH HOH . H 8 HOH A 26 326 27 HOH HOH . H 8 HOH A 27 327 5 HOH HOH . H 8 HOH A 28 328 123 HOH HOH . H 8 HOH A 29 329 80 HOH HOH . H 8 HOH A 30 330 8 HOH HOH . H 8 HOH A 31 331 91 HOH HOH . H 8 HOH A 32 332 15 HOH HOH . H 8 HOH A 33 333 92 HOH HOH . H 8 HOH A 34 334 104 HOH HOH . H 8 HOH A 35 335 35 HOH HOH . H 8 HOH A 36 336 21 HOH HOH . H 8 HOH A 37 337 18 HOH HOH . H 8 HOH A 38 338 43 HOH HOH . H 8 HOH A 39 339 122 HOH HOH . H 8 HOH A 40 340 10 HOH HOH . H 8 HOH A 41 341 39 HOH HOH . H 8 HOH A 42 342 87 HOH HOH . H 8 HOH A 43 343 34 HOH HOH . H 8 HOH A 44 344 67 HOH HOH . H 8 HOH A 45 345 68 HOH HOH . H 8 HOH A 46 346 41 HOH HOH . H 8 HOH A 47 347 120 HOH HOH . H 8 HOH A 48 348 75 HOH HOH . H 8 HOH A 49 349 54 HOH HOH . H 8 HOH A 50 350 59 HOH HOH . H 8 HOH A 51 351 117 HOH HOH . H 8 HOH A 52 352 51 HOH HOH . H 8 HOH A 53 353 94 HOH HOH . H 8 HOH A 54 354 50 HOH HOH . H 8 HOH A 55 355 13 HOH HOH . H 8 HOH A 56 356 73 HOH HOH . H 8 HOH A 57 357 3 HOH HOH . H 8 HOH A 58 358 74 HOH HOH . H 8 HOH A 59 359 90 HOH HOH . H 8 HOH A 60 360 32 HOH HOH . H 8 HOH A 61 361 86 HOH HOH . H 8 HOH A 62 362 7 HOH HOH . H 8 HOH A 63 363 31 HOH HOH . H 8 HOH A 64 364 25 HOH HOH . H 8 HOH A 65 365 6 HOH HOH . H 8 HOH A 66 366 38 HOH HOH . H 8 HOH A 67 367 24 HOH HOH . H 8 HOH A 68 368 46 HOH HOH . H 8 HOH A 69 369 112 HOH HOH . H 8 HOH A 70 370 101 HOH HOH . H 8 HOH A 71 371 48 HOH HOH . H 8 HOH A 72 372 37 HOH HOH . H 8 HOH A 73 373 4 HOH HOH . H 8 HOH A 74 374 119 HOH HOH . H 8 HOH A 75 375 105 HOH HOH . H 8 HOH A 76 376 60 HOH HOH . H 8 HOH A 77 377 47 HOH HOH . H 8 HOH A 78 378 30 HOH HOH . H 8 HOH A 79 379 85 HOH HOH . H 8 HOH A 80 380 33 HOH HOH . H 8 HOH A 81 381 65 HOH HOH . H 8 HOH A 82 382 28 HOH HOH . H 8 HOH A 83 383 66 HOH HOH . H 8 HOH A 84 384 56 HOH HOH . H 8 HOH A 85 385 11 HOH HOH . H 8 HOH A 86 386 17 HOH HOH . H 8 HOH A 87 387 22 HOH HOH . H 8 HOH A 88 388 44 HOH HOH . H 8 HOH A 89 389 49 HOH HOH . H 8 HOH A 90 390 84 HOH HOH . H 8 HOH A 91 391 111 HOH HOH . H 8 HOH A 92 392 70 HOH HOH . H 8 HOH A 93 393 88 HOH HOH . H 8 HOH A 94 394 2 HOH HOH . H 8 HOH A 95 395 36 HOH HOH . H 8 HOH A 96 396 53 HOH HOH . H 8 HOH A 97 397 82 HOH HOH . H 8 HOH A 98 398 63 HOH HOH . H 8 HOH A 99 399 45 HOH HOH . H 8 HOH A 100 400 57 HOH HOH . H 8 HOH A 101 401 114 HOH HOH . H 8 HOH A 102 402 103 HOH HOH . H 8 HOH A 103 403 29 HOH HOH . H 8 HOH A 104 404 113 HOH HOH . H 8 HOH A 105 405 9 HOH HOH . H 8 HOH A 106 406 83 HOH HOH . H 8 HOH A 107 407 26 HOH HOH . H 8 HOH A 108 408 55 HOH HOH . H 8 HOH A 109 409 96 HOH HOH . H 8 HOH A 110 410 89 HOH HOH . H 8 HOH A 111 411 115 HOH HOH . H 8 HOH A 112 412 97 HOH HOH . H 8 HOH A 113 413 98 HOH HOH . H 8 HOH A 114 414 118 HOH HOH . H 8 HOH A 115 415 72 HOH HOH . H 8 HOH A 116 416 102 HOH HOH . H 8 HOH A 117 417 76 HOH HOH . H 8 HOH A 118 418 95 HOH HOH . H 8 HOH A 119 419 99 HOH HOH . H 8 HOH A 120 420 23 HOH HOH . H 8 HOH A 121 421 116 HOH HOH . H 8 HOH A 122 422 64 HOH HOH . H 8 HOH A 123 423 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 6 15.049 -26.235 17.363 1 38.87 ? C1 PEG 205 A 1 HETATM 2 O O1 PEG . . . F 6 15.635 -27.502 17.687 1 47.45 ? O1 PEG 205 A 1 HETATM 3 C C2 PEG . . . F 6 14.403 -26.263 15.989 1 38.21 ? C2 PEG 205 A 1 HETATM 4 O O2 PEG . . . F 6 15.329 -26.58 14.936 1 36.67 ? O2 PEG 205 A 1 HETATM 5 C C3 PEG . . . F 6 14.612 -26.721 13.722 1 37.47 ? C3 PEG 205 A 1 HETATM 6 C C4 PEG . . . F 6 15.557 -27.087 12.623 1 37.85 ? C4 PEG 205 A 1 HETATM 7 O O4 PEG . . . F 6 15.624 -28.485 12.661 1 42.95 ? O4 PEG 205 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #